EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002804 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1591 bases
Position: chrreftig_304:201429-203019
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004709	MMR_HSR1	PF01926.23	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004776	-	627	-	ENSCSAVP00000004709	209 (aa)	-	H2YHB0

Gene Model

Click here to download ENSCSAVG00000002804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002804	-	75	30.573	ENSCSAVG00000006042	-	70	30.573
ENSCSAVG00000002804	-	76	40.881	ENSCSAVG00000008995	-	95	40.881
ENSCSAVG00000002804	-	93	35.122	ENSCSAVG00000009128	-	95	35.122
ENSCSAVG00000002804	-	94	39.109	ENSCSAVG00000009147	-	96	39.109
ENSCSAVG00000002804	-	80	35.088	ENSCSAVG00000005689	-	79	35.088
ENSCSAVG00000002804	-	81	35.294	ENSCSAVG00000000613	-	87	34.524
ENSCSAVG00000002804	-	81	40.230	ENSCSAVG00000008684	-	79	40.230
ENSCSAVG00000002804	-	77	41.250	ENSCSAVG00000005120	-	69	42.775
ENSCSAVG00000002804	-	84	35.519	ENSCSAVG00000011162	-	84	35.519
ENSCSAVG00000002804	-	82	38.012	ENSCSAVG00000010245	-	58	38.012
ENSCSAVG00000002804	-	82	36.628	ENSCSAVG00000002088	-	77	36.628
ENSCSAVG00000002804	-	93	31.481	ENSCSAVG00000007813	-	79	31.481
ENSCSAVG00000002804	-	80	37.278	ENSCSAVG00000010348	-	81	37.278
ENSCSAVG00000002804	-	82	35.088	ENSCSAVG00000000160	-	77	35.088
ENSCSAVG00000002804	-	81	38.235	ENSCSAVG00000001356	-	68	38.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002804	-	86	39.665	ENSCING00000017628	-	83	39.665	Ciona_intestinalis
ENSCSAVG00000002804	-	97	75.369	ENSCING00000018821	-	97	75.369	Ciona_intestinalis
ENSCSAVG00000002804	-	90	45.026	ENSCING00000002803	-	85	45.026	Ciona_intestinalis