EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5893 bases
Position: chrreftig_17:16158-22050
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004808	RNase_PH	PF01138.21	1.4e-18	1	1
ENSCSAVP00000004808	RNase_PH_C	PF03725.15	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004876	-	1207	-	ENSCSAVP00000004808	392 (aa)	-	H2YHK9

Gene Model

Click here to download ENSCSAVG00000002868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002868	-	91	41.873	ENSG00000123737	EXOSC9	98	50.000	Homo_sapiens
ENSCSAVG00000002868	-	71	45.357	ENSAPOG00000001202	exosc9	65	45.357	Acanthochromis_polyacanthus
ENSCSAVG00000002868	-	91	42.424	ENSAMEG00000006133	EXOSC9	79	42.265	Ailuropoda_melanoleuca
ENSCSAVG00000002868	-	91	40.056	ENSACIG00000013514	exosc9	93	38.542	Amphilophus_citrinellus
ENSCSAVG00000002868	-	65	30.000	ENSAOCG00000015357	exosc8	87	30.000	Amphiprion_ocellaris
ENSCSAVG00000002868	-	71	45.357	ENSAOCG00000023602	exosc9	66	45.357	Amphiprion_ocellaris
ENSCSAVG00000002868	-	71	45.000	ENSAPEG00000014416	exosc9	66	45.000	Amphiprion_percula
ENSCSAVG00000002868	-	99	37.789	ENSATEG00000023032	exosc9	97	37.789	Anabas_testudineus
ENSCSAVG00000002868	-	77	41.748	ENSAPLG00000004920	EXOSC9	82	39.883	Anas_platyrhynchos
ENSCSAVG00000002868	-	91	40.730	ENSACAG00000012689	EXOSC9	79	40.616	Anolis_carolinensis
ENSCSAVG00000002868	-	91	41.873	ENSANAG00000024817	EXOSC9	79	42.149	Aotus_nancymaae
ENSCSAVG00000002868	-	71	46.429	ENSACLG00000011471	exosc9	94	38.243	Astatotilapia_calliptera
ENSCSAVG00000002868	-	71	46.071	ENSAMXG00000031976	exosc9	94	36.923	Astyanax_mexicanus
ENSCSAVG00000002868	-	91	42.179	ENSBTAG00000004942	EXOSC9	79	42.179	Bos_taurus
ENSCSAVG00000002868	-	68	34.831	WBGene00018154	exos-9	62	34.831	Caenorhabditis_elegans
ENSCSAVG00000002868	-	91	41.873	ENSCJAG00000003038	EXOSC9	79	41.873	Callithrix_jacchus
ENSCSAVG00000002868	-	91	42.424	ENSCAFG00000004139	EXOSC9	79	42.265	Canis_familiaris
ENSCSAVG00000002868	-	91	42.424	ENSCAFG00020017711	EXOSC9	79	42.265	Canis_lupus_dingo
ENSCSAVG00000002868	-	91	42.179	ENSCHIG00000018091	EXOSC9	79	42.179	Capra_hircus
ENSCSAVG00000002868	-	91	41.873	ENSTSYG00000002664	EXOSC9	79	42.149	Carlito_syrichta
ENSCSAVG00000002868	-	77	36.452	ENSCAPG00000007596	EXOSC9	72	36.893	Cavia_aperea
ENSCSAVG00000002868	-	91	41.322	ENSCPOG00000034344	EXOSC9	79	41.598	Cavia_porcellus
ENSCSAVG00000002868	-	99	36.983	ENSCCAG00000030677	EXOSC9	91	37.226	Cebus_capucinus
ENSCSAVG00000002868	-	91	42.149	ENSCATG00000044273	EXOSC9	79	42.149	Cercocebus_atys
ENSCSAVG00000002868	-	91	41.598	ENSCLAG00000004644	EXOSC9	84	39.848	Chinchilla_lanigera
ENSCSAVG00000002868	-	91	42.149	ENSCSAG00000003705	EXOSC9	79	42.149	Chlorocebus_sabaeus
ENSCSAVG00000002868	-	70	40.511	ENSCHOG00000000779	EXOSC9	71	40.511	Choloepus_hoffmanni
ENSCSAVG00000002868	-	91	42.577	ENSCPBG00000024725	EXOSC9	85	41.237	Chrysemys_picta_bellii
ENSCSAVG00000002868	-	91	41.873	ENSCANG00000037429	EXOSC9	79	41.873	Colobus_angolensis_palliatus
ENSCSAVG00000002868	-	91	42.149	ENSCGRG00001023030	Exosc9	80	42.424	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002868	-	91	42.149	ENSCGRG00000003785	Exosc9	80	42.424	Cricetulus_griseus_crigri
ENSCSAVG00000002868	-	58	30.088	ENSCSEG00000019201	exosc8	93	30.088	Cynoglossus_semilaevis
ENSCSAVG00000002868	-	98	38.601	ENSCSEG00000014567	exosc9	92	38.860	Cynoglossus_semilaevis
ENSCSAVG00000002868	-	91	39.944	ENSCVAG00000001098	exosc9	85	38.918	Cyprinodon_variegatus
ENSCSAVG00000002868	-	99	38.579	ENSDARG00000006392	exosc9	99	39.643	Danio_rerio
ENSCSAVG00000002868	-	91	41.598	ENSDNOG00000010614	EXOSC9	83	40.992	Dasypus_novemcinctus
ENSCSAVG00000002868	-	65	48.617	ENSDORG00000007684	Exosc9	98	48.617	Dipodomys_ordii
ENSCSAVG00000002868	-	97	31.605	FBgn0030789	Rrp45	97	31.605	Drosophila_melanogaster
ENSCSAVG00000002868	-	97	40.568	ENSETEG00000015190	EXOSC9	83	40.568	Echinops_telfairi
ENSCSAVG00000002868	-	91	42.700	ENSEASG00005018326	EXOSC9	79	42.975	Equus_asinus_asinus
ENSCSAVG00000002868	-	91	42.424	ENSECAG00000024732	EXOSC9	79	42.700	Equus_caballus
ENSCSAVG00000002868	-	77	42.395	ENSEEUG00000013683	EXOSC9	67	42.208	Erinaceus_europaeus
ENSCSAVG00000002868	-	91	38.936	ENSELUG00000011222	exosc9	84	37.824	Esox_lucius
ENSCSAVG00000002868	-	91	38.292	ENSFCAG00000025246	EXOSC9	79	38.674	Felis_catus
ENSCSAVG00000002868	-	91	41.713	ENSFALG00000008302	EXOSC9	79	41.713	Ficedula_albicollis
ENSCSAVG00000002868	-	99	39.494	ENSFDAG00000014446	EXOSC9	84	39.747	Fukomys_damarensis
ENSCSAVG00000002868	-	99	38.918	ENSGMOG00000014066	exosc9	98	38.918	Gadus_morhua
ENSCSAVG00000002868	-	91	42.135	ENSGALG00000011884	EXOSC9	92	39.320	Gallus_gallus
ENSCSAVG00000002868	-	91	39.496	ENSGAFG00000015284	exosc9	81	39.227	Gambusia_affinis
ENSCSAVG00000002868	-	71	47.857	ENSGACG00000018481	exosc9	93	39.541	Gasterosteus_aculeatus
ENSCSAVG00000002868	-	91	42.458	ENSGAGG00000016512	EXOSC9	83	41.842	Gopherus_agassizii
ENSCSAVG00000002868	-	91	41.873	ENSGGOG00000028227	EXOSC9	79	41.873	Gorilla_gorilla
ENSCSAVG00000002868	-	71	46.429	ENSHBUG00000001818	exosc9	94	37.887	Haplochromis_burtoni
ENSCSAVG00000002868	-	91	42.149	ENSHGLG00000002467	-	79	42.149	Heterocephalus_glaber_female
ENSCSAVG00000002868	-	87	31.977	ENSHGLG00000016703	-	62	35.793	Heterocephalus_glaber_female
ENSCSAVG00000002868	-	89	40.346	ENSHGLG00000000611	-	77	40.346	Heterocephalus_glaber_female
ENSCSAVG00000002868	-	91	42.149	ENSHGLG00100015581	EXOSC9	79	42.149	Heterocephalus_glaber_male
ENSCSAVG00000002868	-	97	38.259	ENSHGLG00100007278	-	79	38.259	Heterocephalus_glaber_male
ENSCSAVG00000002868	-	87	31.977	ENSHGLG00100005612	-	80	31.977	Heterocephalus_glaber_male
ENSCSAVG00000002868	-	98	39.221	ENSHCOG00000013001	exosc9	97	37.157	Hippocampus_comes
ENSCSAVG00000002868	-	99	37.563	ENSIPUG00000004443	EXOSC9	98	37.563	Ictalurus_punctatus
ENSCSAVG00000002868	-	91	41.598	ENSSTOG00000007984	EXOSC9	79	41.598	Ictidomys_tridecemlineatus
ENSCSAVG00000002868	-	64	49.402	ENSJJAG00000008858	Exosc9	100	49.402	Jaculus_jaculus
ENSCSAVG00000002868	-	91	40.782	ENSKMAG00000020177	exosc9	86	39.637	Kryptolebias_marmoratus
ENSCSAVG00000002868	-	71	46.237	ENSLBEG00000019599	exosc9	86	39.276	Labrus_bergylta
ENSCSAVG00000002868	-	91	35.933	ENSLACG00000015203	EXOSC9	84	35.933	Latimeria_chalumnae
ENSCSAVG00000002868	-	70	47.653	ENSLOCG00000002999	exosc9	98	47.653	Lepisosteus_oculatus
ENSCSAVG00000002868	-	91	41.644	ENSLAFG00000009514	EXOSC9	84	40.000	Loxodonta_africana
ENSCSAVG00000002868	-	91	42.149	ENSMFAG00000038292	EXOSC9	79	42.149	Macaca_fascicularis
ENSCSAVG00000002868	-	91	42.149	ENSMMUG00000009816	EXOSC9	97	50.424	Macaca_mulatta
ENSCSAVG00000002868	-	91	42.149	ENSMNEG00000029445	EXOSC9	79	42.149	Macaca_nemestrina
ENSCSAVG00000002868	-	91	42.149	ENSMLEG00000042316	EXOSC9	79	42.149	Mandrillus_leucophaeus
ENSCSAVG00000002868	-	71	46.071	ENSMAMG00000006465	exosc9	84	39.257	Mastacembelus_armatus
ENSCSAVG00000002868	-	71	46.429	ENSMZEG00005011461	exosc9	94	38.243	Maylandia_zebra
ENSCSAVG00000002868	-	82	42.415	ENSMGAG00000010649	EXOSC9	91	39.314	Meleagris_gallopavo
ENSCSAVG00000002868	-	65	48.221	ENSMAUG00000008629	Exosc9	98	50.420	Mesocricetus_auratus
ENSCSAVG00000002868	-	91	41.873	ENSMICG00000006994	EXOSC9	79	42.149	Microcebus_murinus
ENSCSAVG00000002868	-	91	41.322	ENSMOCG00000007209	Exosc9	79	41.598	Microtus_ochrogaster
ENSCSAVG00000002868	-	71	45.196	ENSMMOG00000006666	exosc9	93	37.662	Mola_mola
ENSCSAVG00000002868	-	91	41.598	ENSMODG00000018934	EXOSC9	79	41.713	Monodelphis_domestica
ENSCSAVG00000002868	-	71	47.143	ENSMALG00000021891	exosc9	83	40.464	Monopterus_albus
ENSCSAVG00000002868	-	91	42.149	MGP_CAROLIEiJ_G0024939	Exosc9	100	54.422	Mus_caroli
ENSCSAVG00000002868	-	91	41.011	ENSMUSG00000027714	Exosc9	100	54.422	Mus_musculus
ENSCSAVG00000002868	-	71	47.143	MGP_PahariEiJ_G0026379	Exosc9	100	53.741	Mus_pahari
ENSCSAVG00000002868	-	91	41.598	MGP_SPRETEiJ_G0025873	Exosc9	100	54.422	Mus_spretus
ENSCSAVG00000002868	-	91	42.700	ENSMPUG00000017410	EXOSC9	79	42.424	Mustela_putorius_furo
ENSCSAVG00000002868	-	91	42.192	ENSMLUG00000005167	EXOSC9	79	42.308	Myotis_lucifugus
ENSCSAVG00000002868	-	67	47.348	ENSNGAG00000022671	Exosc9	96	47.348	Nannospalax_galili
ENSCSAVG00000002868	-	99	34.872	ENSNBRG00000019108	exosc9	98	34.872	Neolamprologus_brichardi
ENSCSAVG00000002868	-	91	41.873	ENSNLEG00000009300	EXOSC9	79	41.873	Nomascus_leucogenys
ENSCSAVG00000002868	-	91	34.711	ENSMEUG00000000117	EXOSC9	84	33.766	Notamacropus_eugenii
ENSCSAVG00000002868	-	91	39.888	ENSOPRG00000001158	EXOSC9	76	39.888	Ochotona_princeps
ENSCSAVG00000002868	-	99	34.140	ENSODEG00000000589	EXOSC9	79	41.873	Octodon_degus
ENSCSAVG00000002868	-	71	46.429	ENSONIG00000003399	exosc9	85	38.601	Oreochromis_niloticus
ENSCSAVG00000002868	-	91	41.011	ENSOANG00000015114	EXOSC9	79	41.127	Ornithorhynchus_anatinus
ENSCSAVG00000002868	-	91	41.598	ENSOCUG00000003046	EXOSC9	79	41.873	Oryctolagus_cuniculus
ENSCSAVG00000002868	-	71	45.000	ENSORLG00000001989	exosc9	84	38.043	Oryzias_latipes
ENSCSAVG00000002868	-	71	45.000	ENSORLG00020014069	exosc9	98	34.848	Oryzias_latipes_hni
ENSCSAVG00000002868	-	71	44.643	ENSORLG00015013630	exosc9	93	36.207	Oryzias_latipes_hsok
ENSCSAVG00000002868	-	99	37.745	ENSOMEG00000021965	exosc9	93	37.745	Oryzias_melastigma
ENSCSAVG00000002868	-	91	41.598	ENSOGAG00000016104	EXOSC9	79	41.873	Otolemur_garnettii
ENSCSAVG00000002868	-	91	42.179	ENSOARG00000014520	EXOSC9	79	42.179	Ovis_aries
ENSCSAVG00000002868	-	91	41.873	ENSPPAG00000043865	EXOSC9	79	41.873	Pan_paniscus
ENSCSAVG00000002868	-	97	40.827	ENSPPRG00000014689	-	83	41.085	Panthera_pardus
ENSCSAVG00000002868	-	91	42.149	ENSPTIG00000010017	EXOSC9	79	42.424	Panthera_tigris_altaica
ENSCSAVG00000002868	-	91	42.149	ENSPTRG00000044568	EXOSC9	79	42.149	Pan_troglodytes
ENSCSAVG00000002868	-	91	42.149	ENSPANG00000000792	EXOSC9	79	42.149	Papio_anubis
ENSCSAVG00000002868	-	91	40.449	ENSPKIG00000005890	exosc9	81	40.449	Paramormyrops_kingsleyae
ENSCSAVG00000002868	-	77	41.118	ENSPSIG00000016020	EXOSC9	84	40.059	Pelodiscus_sinensis
ENSCSAVG00000002868	-	71	48.387	ENSPMGG00000019387	exosc9	97	49.780	Periophthalmus_magnuspinnatus
ENSCSAVG00000002868	-	91	41.598	ENSPEMG00000000544	Exosc9	79	41.873	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002868	-	58	47.345	ENSPMAG00000004877	exosc9	77	38.835	Petromyzon_marinus
ENSCSAVG00000002868	-	91	41.713	ENSPCIG00000011193	EXOSC9	80	41.873	Phascolarctos_cinereus
ENSCSAVG00000002868	-	91	39.385	ENSPFOG00000016008	exosc9	81	39.118	Poecilia_formosa
ENSCSAVG00000002868	-	91	39.385	ENSPLAG00000016052	exosc9	81	39.118	Poecilia_latipinna
ENSCSAVG00000002868	-	99	35.533	ENSPMEG00000023212	exosc9	98	35.910	Poecilia_mexicana
ENSCSAVG00000002868	-	91	39.385	ENSPREG00000002069	exosc9	76	39.118	Poecilia_reticulata
ENSCSAVG00000002868	-	91	41.873	ENSPPYG00000015037	EXOSC9	79	41.873	Pongo_abelii
ENSCSAVG00000002868	-	74	41.818	ENSPCAG00000011287	EXOSC9	65	41.818	Procavia_capensis
ENSCSAVG00000002868	-	91	41.598	ENSPCOG00000003962	EXOSC9	79	41.873	Propithecus_coquereli
ENSCSAVG00000002868	-	71	41.509	ENSPVAG00000001284	EXOSC9	65	41.509	Pteropus_vampyrus
ENSCSAVG00000002868	-	99	38.596	ENSPNAG00000000578	exosc9	81	38.596	Pygocentrus_nattereri
ENSCSAVG00000002868	-	91	41.873	ENSRNOG00000014674	Exosc9	82	42.149	Rattus_norvegicus
ENSCSAVG00000002868	-	91	42.149	ENSRBIG00000030341	EXOSC9	79	42.149	Rhinopithecus_bieti
ENSCSAVG00000002868	-	91	42.149	ENSRROG00000040804	EXOSC9	79	42.149	Rhinopithecus_roxellana
ENSCSAVG00000002868	-	72	33.670	YDR280W	-	97	33.670	Saccharomyces_cerevisiae
ENSCSAVG00000002868	-	91	41.873	ENSSBOG00000020744	EXOSC9	79	42.149	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002868	-	91	41.160	ENSSHAG00000002000	EXOSC9	79	41.484	Sarcophilus_harrisii
ENSCSAVG00000002868	-	99	40.506	ENSSFOG00015012903	exosc9	89	40.506	Scleropages_formosus
ENSCSAVG00000002868	-	91	40.947	ENSSMAG00000012071	exosc9	85	39.896	Scophthalmus_maximus
ENSCSAVG00000002868	-	97	39.481	ENSSDUG00000002313	exosc9	86	39.481	Seriola_dumerili
ENSCSAVG00000002868	-	98	39.031	ENSSLDG00000020591	exosc9	86	39.031	Seriola_lalandi_dorsalis
ENSCSAVG00000002868	-	99	39.500	ENSSPUG00000010200	EXOSC9	89	39.500	Sphenodon_punctatus
ENSCSAVG00000002868	-	71	44.643	ENSSPAG00000003892	exosc9	88	37.306	Stegastes_partitus
ENSCSAVG00000002868	-	91	42.149	ENSSSCG00000009096	EXOSC9	79	42.149	Sus_scrofa
ENSCSAVG00000002868	-	58	39.149	ENSTGUG00000015146	-	77	39.149	Taeniopygia_guttata
ENSCSAVG00000002868	-	85	42.059	ENSTGUG00000001938	-	78	42.059	Taeniopygia_guttata
ENSCSAVG00000002868	-	91	40.548	ENSTRUG00000004119	exosc9	88	40.489	Takifugu_rubripes
ENSCSAVG00000002868	-	99	37.717	ENSTNIG00000004601	exosc9	88	40.223	Tetraodon_nigroviridis
ENSCSAVG00000002868	-	63	49.593	ENSTTRG00000001584	EXOSC9	54	49.593	Tursiops_truncatus
ENSCSAVG00000002868	-	67	41.636	ENSUAMG00000011140	EXOSC9	71	41.264	Ursus_americanus
ENSCSAVG00000002868	-	91	42.424	ENSUMAG00000003848	EXOSC9	79	42.265	Ursus_maritimus
ENSCSAVG00000002868	-	91	37.466	ENSVPAG00000012110	EXOSC9	76	37.466	Vicugna_pacos
ENSCSAVG00000002868	-	91	42.424	ENSVVUG00000013324	EXOSC9	79	42.265	Vulpes_vulpes
ENSCSAVG00000002868	-	91	41.620	ENSXETG00000021118	exosc9	90	40.470	Xenopus_tropicalis
ENSCSAVG00000002868	-	91	38.950	ENSXCOG00000011971	exosc9	96	46.610	Xiphophorus_couchianus
ENSCSAVG00000002868	-	91	40.503	ENSXMAG00000017823	exosc9	89	38.182	Xiphophorus_maculatus