EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002918 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10043 bases
Position: chrreftig_899:31546-41588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004903	DEAD	PF00270.29	7.3e-08	1	1
ENSCSAVP00000004902	DEAD	PF00270.29	8.1e-08	1	1
ENSCSAVP00000004901	DEAD	PF00270.29	8.2e-08	1	1
ENSCSAVP00000004904	DEAD	PF00270.29	8.5e-08	1	1
ENSCSAVP00000004903	HA2	PF04408.23	9.4e-24	1	1
ENSCSAVP00000004902	HA2	PF04408.23	9.9e-24	1	1
ENSCSAVP00000004901	HA2	PF04408.23	9.9e-24	1	1
ENSCSAVP00000004904	HA2	PF04408.23	9.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004970	-	3399	-	ENSCSAVP00000004902	1133 (aa)	-	H2YHV3
ENSCSAVT00000004971	-	3267	-	ENSCSAVP00000004903	1089 (aa)	-	H2YHV4
ENSCSAVT00000004969	-	3402	-	ENSCSAVP00000004901	1134 (aa)	-	H2YHV2
ENSCSAVT00000004972	-	3405	-	ENSCSAVP00000004904	1135 (aa)	-	H2YHV5

Gene Model

Click here to download ENSCSAVG00000002918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002918	-	55	42.915	ENSCSAVG00000009212	-	64	42.915
ENSCSAVG00000002918	-	56	44.231	ENSCSAVG00000008110	-	79	48.684
ENSCSAVG00000002918	-	50	36.057	ENSCSAVG00000009685	-	78	42.157
ENSCSAVG00000002918	-	72	45.510	ENSCSAVG00000001117	-	98	52.258
ENSCSAVG00000002918	-	54	33.387	ENSCSAVG00000001493	-	61	32.084
ENSCSAVG00000002918	-	57	59.355	ENSCSAVG00000003870	-	72	59.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002918	-	93	80.440	ENSG00000067596	DHX8	87	89.167	Homo_sapiens
ENSCSAVG00000002918	-	91	80.809	ENSAPOG00000018162	dhx8	82	81.860	Acanthochromis_polyacanthus
ENSCSAVG00000002918	-	92	80.556	ENSAMEG00000018294	DHX8	82	81.481	Ailuropoda_melanoleuca
ENSCSAVG00000002918	-	89	80.809	ENSACIG00000013170	dhx8	81	81.618	Amphilophus_citrinellus
ENSCSAVG00000002918	-	91	80.809	ENSAOCG00000006439	dhx8	82	81.860	Amphiprion_ocellaris
ENSCSAVG00000002918	-	91	80.809	ENSAPEG00000005641	dhx8	84	81.618	Amphiprion_percula
ENSCSAVG00000002918	-	91	80.462	ENSATEG00000007660	dhx8	83	81.387	Anabas_testudineus
ENSCSAVG00000002918	-	92	80.324	ENSAPLG00000002788	DHX8	80	81.490	Anas_platyrhynchos
ENSCSAVG00000002918	-	92	80.093	ENSACAG00000013509	DHX8	84	80.903	Anolis_carolinensis
ENSCSAVG00000002918	-	92	80.671	ENSANAG00000030580	DHX8	82	81.481	Aotus_nancymaae
ENSCSAVG00000002918	-	90	80.047	ENSACLG00000024759	dhx8	83	80.869	Astatotilapia_calliptera
ENSCSAVG00000002918	-	99	73.602	ENSAMXG00000009430	dhx8	83	81.374	Astyanax_mexicanus
ENSCSAVG00000002918	-	92	80.556	ENSBTAG00000008339	DHX8	82	81.481	Bos_taurus
ENSCSAVG00000002918	-	91	67.314	WBGene00003393	mog-5	85	66.367	Caenorhabditis_elegans
ENSCSAVG00000002918	-	92	80.556	ENSCJAG00000010659	-	82	81.753	Callithrix_jacchus
ENSCSAVG00000002918	-	92	80.556	ENSCAFG00000014556	DHX8	82	81.481	Canis_familiaris
ENSCSAVG00000002918	-	92	80.556	ENSCAFG00020012922	DHX8	82	81.481	Canis_lupus_dingo
ENSCSAVG00000002918	-	92	80.556	ENSCHIG00000009291	DHX8	82	81.481	Capra_hircus
ENSCSAVG00000002918	-	92	80.600	ENSTSYG00000008782	DHX8	83	81.699	Carlito_syrichta
ENSCSAVG00000002918	-	89	80.093	ENSCAPG00000005701	DHX8	81	80.903	Cavia_aperea
ENSCSAVG00000002918	-	92	80.093	ENSCPOG00000000224	DHX8	82	80.903	Cavia_porcellus
ENSCSAVG00000002918	-	92	80.556	ENSCCAG00000021748	DHX8	82	81.481	Cebus_capucinus
ENSCSAVG00000002918	-	92	80.324	ENSCATG00000043128	DHX8	82	81.490	Cercocebus_atys
ENSCSAVG00000002918	-	91	80.116	ENSCLAG00000016045	DHX8	82	80.925	Chinchilla_lanigera
ENSCSAVG00000002918	-	92	80.415	ENSCSAG00000003443	DHX8	82	80.415	Chlorocebus_sabaeus
ENSCSAVG00000002918	-	87	80.419	ENSCHOG00000009720	DHX8	78	81.281	Choloepus_hoffmanni
ENSCSAVG00000002918	-	92	80.440	ENSCPBG00000016252	DHX8	83	81.607	Chrysemys_picta_bellii
ENSCSAVG00000002918	-	93	93.450	ENSCING00000001546	-	85	93.015	Ciona_intestinalis
ENSCSAVG00000002918	-	92	80.440	ENSCANG00000031479	DHX8	77	87.097	Colobus_angolensis_palliatus
ENSCSAVG00000002918	-	91	80.556	ENSCGRG00001021413	Dhx8	81	81.366	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002918	-	91	80.720	ENSCSEG00000015029	dhx8	82	81.395	Cynoglossus_semilaevis
ENSCSAVG00000002918	-	91	80.462	ENSCVAG00000006188	dhx8	82	81.512	Cyprinodon_variegatus
ENSCSAVG00000002918	-	91	80.440	ENSDARG00000054707	dhx8	82	81.490	Danio_rerio
ENSCSAVG00000002918	-	92	80.254	ENSDNOG00000013606	DHX8	82	80.947	Dasypus_novemcinctus
ENSCSAVG00000002918	-	92	75.810	ENSDORG00000013845	Dhx8	81	76.736	Dipodomys_ordii
ENSCSAVG00000002918	-	93	74.654	FBgn0086895	pea	82	74.654	Drosophila_melanogaster
ENSCSAVG00000002918	-	66	89.167	ENSETEG00000010986	DHX8	59	89.167	Echinops_telfairi
ENSCSAVG00000002918	-	91	75.447	ENSEBUG00000001680	dhx8	78	76.139	Eptatretus_burgeri
ENSCSAVG00000002918	-	92	80.556	ENSEASG00005010097	DHX8	81	81.723	Equus_asinus_asinus
ENSCSAVG00000002918	-	92	80.556	ENSECAG00000019601	DHX8	81	81.723	Equus_caballus
ENSCSAVG00000002918	-	81	88.804	ENSEEUG00000004835	-	65	88.804	Erinaceus_europaeus
ENSCSAVG00000002918	-	91	80.208	ENSELUG00000007955	dhx8	83	81.257	Esox_lucius
ENSCSAVG00000002918	-	92	80.671	ENSFCAG00000009908	DHX8	81	81.723	Felis_catus
ENSCSAVG00000002918	-	79	80.440	ENSFALG00000000810	DHX8	77	81.607	Ficedula_albicollis
ENSCSAVG00000002918	-	92	80.208	ENSFDAG00000017832	-	82	81.019	Fukomys_damarensis
ENSCSAVG00000002918	-	91	80.578	ENSFHEG00000012389	dhx8	83	81.387	Fundulus_heteroclitus
ENSCSAVG00000002918	-	79	84.932	ENSGMOG00000016045	dhx8	74	84.932	Gadus_morhua
ENSCSAVG00000002918	-	91	80.023	ENSGMOG00000016093	dhx8	83	81.069	Gadus_morhua
ENSCSAVG00000002918	-	89	78.463	ENSGALG00000032305	DHX8	85	78.511	Gallus_gallus
ENSCSAVG00000002918	-	91	80.694	ENSGAFG00000012510	dhx8	82	81.744	Gambusia_affinis
ENSCSAVG00000002918	-	92	80.023	ENSGACG00000003750	dhx8	83	81.069	Gasterosteus_aculeatus
ENSCSAVG00000002918	-	92	76.074	ENSGACG00000003736	dhx8	83	76.655	Gasterosteus_aculeatus
ENSCSAVG00000002918	-	93	80.671	ENSGAGG00000024323	DHX8	83	81.723	Gopherus_agassizii
ENSCSAVG00000002918	-	93	80.556	ENSGGOG00000000143	DHX8	82	81.366	Gorilla_gorilla
ENSCSAVG00000002918	-	91	80.925	ENSHBUG00000005644	dhx8	82	81.977	Haplochromis_burtoni
ENSCSAVG00000002918	-	92	80.208	ENSHGLG00000011583	-	81	81.257	Heterocephalus_glaber_female
ENSCSAVG00000002918	-	92	80.093	ENSHGLG00100000532	-	81	81.141	Heterocephalus_glaber_male
ENSCSAVG00000002918	-	91	80.347	ENSHCOG00000016177	dhx8	83	81.395	Hippocampus_comes
ENSCSAVG00000002918	-	92	80.440	ENSIPUG00000019179	dhx8	83	81.490	Ictalurus_punctatus
ENSCSAVG00000002918	-	92	80.440	ENSSTOG00000013747	DHX8	81	81.607	Ictidomys_tridecemlineatus
ENSCSAVG00000002918	-	88	80.556	ENSJJAG00000017249	Dhx8	73	81.366	Jaculus_jaculus
ENSCSAVG00000002918	-	95	80.462	ENSKMAG00000005568	dhx8	88	81.272	Kryptolebias_marmoratus
ENSCSAVG00000002918	-	91	79.306	ENSLBEG00000012048	dhx8	83	80.349	Labrus_bergylta
ENSCSAVG00000002918	-	89	77.130	ENSLBEG00000011490	dhx8	83	77.336	Labrus_bergylta
ENSCSAVG00000002918	-	91	80.324	ENSLACG00000001765	DHX8	83	81.374	Latimeria_chalumnae
ENSCSAVG00000002918	-	93	80.324	ENSLOCG00000012147	dhx8	83	81.134	Lepisosteus_oculatus
ENSCSAVG00000002918	-	90	80.671	ENSLAFG00000022159	DHX8	81	81.481	Loxodonta_africana
ENSCSAVG00000002918	-	92	80.324	ENSMFAG00000044651	DHX8	82	81.490	Macaca_fascicularis
ENSCSAVG00000002918	-	93	80.324	ENSMMUG00000012071	DHX8	82	81.490	Macaca_mulatta
ENSCSAVG00000002918	-	92	80.324	ENSMNEG00000033786	DHX8	82	81.490	Macaca_nemestrina
ENSCSAVG00000002918	-	86	80.000	ENSMLEG00000006176	DHX8	79	80.000	Mandrillus_leucophaeus
ENSCSAVG00000002918	-	91	80.694	ENSMAMG00000006195	dhx8	82	81.744	Mastacembelus_armatus
ENSCSAVG00000002918	-	91	80.925	ENSMZEG00005007559	dhx8	82	81.977	Maylandia_zebra
ENSCSAVG00000002918	-	93	80.324	ENSMGAG00000002343	DHX8	84	81.490	Meleagris_gallopavo
ENSCSAVG00000002918	-	92	80.440	ENSMICG00000009509	DHX8	81	81.607	Microcebus_murinus
ENSCSAVG00000002918	-	92	80.556	ENSMOCG00000008962	Dhx8	81	81.607	Microtus_ochrogaster
ENSCSAVG00000002918	-	70	78.804	ENSMMOG00000000567	dhx8	94	79.844	Mola_mola
ENSCSAVG00000002918	-	79	80.462	ENSMMOG00000000596	dhx8	80	81.272	Mola_mola
ENSCSAVG00000002918	-	92	80.671	ENSMODG00000015181	DHX8	83	81.839	Monodelphis_domestica
ENSCSAVG00000002918	-	91	78.150	ENSMALG00000013129	dhx8	82	79.186	Monopterus_albus
ENSCSAVG00000002918	-	92	80.440	MGP_CAROLIEiJ_G0017228	Dhx8	80	81.607	Mus_caroli
ENSCSAVG00000002918	-	92	80.440	ENSMUSG00000034931	Dhx8	80	81.607	Mus_musculus
ENSCSAVG00000002918	-	92	80.440	MGP_PahariEiJ_G0018358	Dhx8	80	81.607	Mus_pahari
ENSCSAVG00000002918	-	92	80.440	MGP_SPRETEiJ_G0018071	Dhx8	84	89.655	Mus_spretus
ENSCSAVG00000002918	-	92	80.556	ENSMPUG00000009717	DHX8	81	81.723	Mustela_putorius_furo
ENSCSAVG00000002918	-	92	78.431	ENSMLUG00000000090	DHX8	80	79.466	Myotis_lucifugus
ENSCSAVG00000002918	-	92	80.556	ENSNGAG00000023993	Dhx8	81	81.607	Nannospalax_galili
ENSCSAVG00000002918	-	91	80.809	ENSNBRG00000023205	dhx8	82	81.860	Neolamprologus_brichardi
ENSCSAVG00000002918	-	89	80.671	ENSMEUG00000016093	DHX8	83	81.839	Notamacropus_eugenii
ENSCSAVG00000002918	-	78	77.479	ENSOPRG00000014865	DHX8	75	77.479	Ochotona_princeps
ENSCSAVG00000002918	-	92	80.093	ENSODEG00000018025	DHX8	81	81.257	Octodon_degus
ENSCSAVG00000002918	-	91	80.925	ENSONIG00000018248	dhx8	82	81.977	Oreochromis_niloticus
ENSCSAVG00000002918	-	55	81.064	ENSOANG00000003160	-	73	81.064	Ornithorhynchus_anatinus
ENSCSAVG00000002918	-	92	80.556	ENSOCUG00000008014	DHX8	83	81.607	Oryctolagus_cuniculus
ENSCSAVG00000002918	-	91	80.578	ENSORLG00000011951	dhx8	82	81.628	Oryzias_latipes
ENSCSAVG00000002918	-	91	80.578	ENSORLG00020022333	dhx8	80	81.387	Oryzias_latipes_hni
ENSCSAVG00000002918	-	91	80.809	ENSORLG00015021793	dhx8	80	81.618	Oryzias_latipes_hsok
ENSCSAVG00000002918	-	91	80.694	ENSOMEG00000004222	dhx8	83	81.503	Oryzias_melastigma
ENSCSAVG00000002918	-	92	79.234	ENSOGAG00000010418	DHX8	80	80.280	Otolemur_garnettii
ENSCSAVG00000002918	-	92	80.556	ENSOARG00000005409	DHX8	81	81.723	Ovis_aries
ENSCSAVG00000002918	-	93	80.440	ENSPPAG00000042508	DHX8	82	81.366	Pan_paniscus
ENSCSAVG00000002918	-	92	80.671	ENSPPRG00000003753	DHX8	84	80.576	Panthera_pardus
ENSCSAVG00000002918	-	92	80.671	ENSPTIG00000008944	DHX8	81	81.723	Panthera_tigris_altaica
ENSCSAVG00000002918	-	93	80.440	ENSPTRG00000009246	DHX8	82	81.366	Pan_troglodytes
ENSCSAVG00000002918	-	92	80.324	ENSPANG00000021364	DHX8	82	81.333	Papio_anubis
ENSCSAVG00000002918	-	91	80.671	ENSPKIG00000001290	dhx8	82	81.723	Paramormyrops_kingsleyae
ENSCSAVG00000002918	-	79	80.556	ENSPSIG00000005550	DHX8	77	81.533	Pelodiscus_sinensis
ENSCSAVG00000002918	-	91	80.809	ENSPMGG00000019078	dhx8	84	81.860	Periophthalmus_magnuspinnatus
ENSCSAVG00000002918	-	93	80.324	ENSPEMG00000012654	Dhx8	83	81.374	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002918	-	65	86.056	ENSPMAG00000001726	dhx8	94	86.056	Petromyzon_marinus
ENSCSAVG00000002918	-	92	80.671	ENSPCIG00000030254	DHX8	83	81.839	Phascolarctos_cinereus
ENSCSAVG00000002918	-	91	80.694	ENSPFOG00000017661	dhx8	80	81.503	Poecilia_formosa
ENSCSAVG00000002918	-	91	80.694	ENSPLAG00000011548	dhx8	80	81.503	Poecilia_latipinna
ENSCSAVG00000002918	-	91	80.694	ENSPMEG00000008166	dhx8	80	81.503	Poecilia_mexicana
ENSCSAVG00000002918	-	91	80.694	ENSPREG00000011752	dhx8	79	81.744	Poecilia_reticulata
ENSCSAVG00000002918	-	93	80.440	ENSPPYG00000008357	DHX8	82	81.366	Pongo_abelii
ENSCSAVG00000002918	-	88	90.117	ENSPCAG00000015519	DHX8	77	90.117	Procavia_capensis
ENSCSAVG00000002918	-	92	80.440	ENSPVAG00000014872	DHX8	81	81.607	Pteropus_vampyrus
ENSCSAVG00000002918	-	91	80.925	ENSPNYG00000001365	dhx8	82	81.977	Pundamilia_nyererei
ENSCSAVG00000002918	-	92	80.440	ENSPNAG00000008427	dhx8	82	81.490	Pygocentrus_nattereri
ENSCSAVG00000002918	-	92	80.440	ENSRNOG00000020772	Dhx8	80	81.607	Rattus_norvegicus
ENSCSAVG00000002918	-	93	79.398	ENSRBIG00000039031	DHX8	85	89.695	Rhinopithecus_bieti
ENSCSAVG00000002918	-	93	80.324	ENSRROG00000036032	DHX8	82	81.250	Rhinopithecus_roxellana
ENSCSAVG00000002918	-	79	50.056	YER013W	-	76	50.056	Saccharomyces_cerevisiae
ENSCSAVG00000002918	-	92	80.556	ENSSBOG00000031719	DHX8	82	81.753	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002918	-	92	80.671	ENSSHAG00000009871	DHX8	83	81.839	Sarcophilus_harrisii
ENSCSAVG00000002918	-	92	79.977	ENSSFOG00015024187	dhx8	84	80.671	Scleropages_formosus
ENSCSAVG00000002918	-	91	80.462	ENSSMAG00000008607	dhx8	82	81.272	Scophthalmus_maximus
ENSCSAVG00000002918	-	94	77.003	ENSSMAG00000008522	dhx8	82	77.220	Scophthalmus_maximus
ENSCSAVG00000002918	-	91	76.539	ENSSDUG00000010822	dhx8	84	77.120	Seriola_dumerili
ENSCSAVG00000002918	-	91	80.809	ENSSDUG00000010774	dhx8	82	81.618	Seriola_dumerili
ENSCSAVG00000002918	-	79	80.809	ENSSLDG00000023594	dhx8	89	81.860	Seriola_lalandi_dorsalis
ENSCSAVG00000002918	-	91	75.029	ENSSLDG00000023277	dhx8	86	75.783	Seriola_lalandi_dorsalis
ENSCSAVG00000002918	-	76	88.462	ENSSARG00000007300	DHX8	66	88.462	Sorex_araneus
ENSCSAVG00000002918	-	91	80.324	ENSSPUG00000004382	DHX8	84	81.134	Sphenodon_punctatus
ENSCSAVG00000002918	-	88	79.953	ENSSPAG00000006314	dhx8	85	79.096	Stegastes_partitus
ENSCSAVG00000002918	-	93	80.417	ENSSSCG00000017378	DHX8	82	81.257	Sus_scrofa
ENSCSAVG00000002918	-	93	80.440	ENSTGUG00000002881	DHX8	83	81.250	Taeniopygia_guttata
ENSCSAVG00000002918	-	91	76.423	ENSTRUG00000004063	dhx8	84	77.352	Takifugu_rubripes
ENSCSAVG00000002918	-	59	54.934	ENSTRUG00000002454	-	67	71.102	Takifugu_rubripes
ENSCSAVG00000002918	-	89	76.362	ENSTNIG00000002771	dhx8	81	77.289	Tetraodon_nigroviridis
ENSCSAVG00000002918	-	79	88.717	ENSTBEG00000012089	DHX8	69	88.717	Tupaia_belangeri
ENSCSAVG00000002918	-	93	77.894	ENSTTRG00000016056	DHX8	82	79.045	Tursiops_truncatus
ENSCSAVG00000002918	-	92	80.556	ENSUAMG00000018121	DHX8	83	81.723	Ursus_americanus
ENSCSAVG00000002918	-	79	80.556	ENSUMAG00000012797	DHX8	77	81.481	Ursus_maritimus
ENSCSAVG00000002918	-	92	80.671	ENSVVUG00000017409	DHX8	79	81.723	Vulpes_vulpes
ENSCSAVG00000002918	-	92	75.694	ENSXETG00000013672	dhx8	81	76.362	Xenopus_tropicalis
ENSCSAVG00000002918	-	89	80.578	ENSXCOG00000003866	dhx8	80	81.387	Xiphophorus_couchianus
ENSCSAVG00000002918	-	91	80.578	ENSXMAG00000017907	dhx8	80	81.387	Xiphophorus_maculatus