EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7086 bases
Position: chrreftig_41:384998-392083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004989	PDCD9	PF07147.12	5.9e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005060	-	1791	-	ENSCSAVP00000004989	406 (aa)	-	H2YI40

Gene Model

Click here to download ENSCSAVG00000002974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002974	-	78	31.269	ENSG00000112996	MRPS30	66	31.269	Homo_sapiens
ENSCSAVG00000002974	-	79	31.902	ENSAPOG00000005833	mrps30	60	31.902	Acanthochromis_polyacanthus
ENSCSAVG00000002974	-	77	30.938	ENSAMEG00000000569	MRPS30	68	30.938	Ailuropoda_melanoleuca
ENSCSAVG00000002974	-	79	30.330	ENSACIG00000024177	mrps30	70	30.330	Amphilophus_citrinellus
ENSCSAVG00000002974	-	79	30.793	ENSAOCG00000018917	mrps30	68	30.793	Amphiprion_ocellaris
ENSCSAVG00000002974	-	79	31.532	ENSAPEG00000012822	mrps30	63	31.532	Amphiprion_percula
ENSCSAVG00000002974	-	81	31.105	ENSATEG00000001216	mrps30	71	31.105	Anabas_testudineus
ENSCSAVG00000002974	-	79	31.902	ENSACAG00000011165	MRPS30	67	31.902	Anolis_carolinensis
ENSCSAVG00000002974	-	78	31.366	ENSANAG00000036508	MRPS30	67	31.366	Aotus_nancymaae
ENSCSAVG00000002974	-	71	30.717	ENSAMXG00000016126	mrps30	60	30.717	Astyanax_mexicanus
ENSCSAVG00000002974	-	80	31.193	ENSBTAG00000000084	MRPS30	68	31.193	Bos_taurus
ENSCSAVG00000002974	-	69	32.168	ENSCJAG00000040653	MRPS30	67	31.385	Callithrix_jacchus
ENSCSAVG00000002974	-	78	30.341	ENSCAFG00000018516	MRPS30	68	30.341	Canis_familiaris
ENSCSAVG00000002974	-	78	30.341	ENSCAFG00020023088	MRPS30	68	30.341	Canis_lupus_dingo
ENSCSAVG00000002974	-	75	31.090	ENSCHIG00000018591	MRPS30	66	31.579	Capra_hircus
ENSCSAVG00000002974	-	71	32.770	ENSTSYG00000009384	MRPS30	67	32.308	Carlito_syrichta
ENSCSAVG00000002974	-	78	31.761	ENSCPOG00000002067	MRPS30	66	31.761	Cavia_porcellus
ENSCSAVG00000002974	-	71	32.660	ENSCCAG00000019340	MRPS30	66	32.000	Cebus_capucinus
ENSCSAVG00000002974	-	78	31.269	ENSCATG00000044059	MRPS30	66	31.804	Cercocebus_atys
ENSCSAVG00000002974	-	63	33.206	ENSCLAG00000007412	MRPS30	60	33.206	Chinchilla_lanigera
ENSCSAVG00000002974	-	78	30.650	ENSCSAG00000016737	MRPS30	66	30.650	Chlorocebus_sabaeus
ENSCSAVG00000002974	-	78	30.247	ENSCPBG00000007637	MRPS30	70	30.247	Chrysemys_picta_bellii
ENSCSAVG00000002974	-	78	31.077	ENSCANG00000034816	MRPS30	67	31.077	Colobus_angolensis_palliatus
ENSCSAVG00000002974	-	78	30.341	ENSCGRG00001003133	Mrps30	66	30.341	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002974	-	78	30.341	ENSCGRG00000012001	Mrps30	74	30.341	Cricetulus_griseus_crigri
ENSCSAVG00000002974	-	79	30.154	ENSCSEG00000018816	mrps30	68	30.154	Cynoglossus_semilaevis
ENSCSAVG00000002974	-	62	32.549	ENSCVAG00000015707	mrps30	57	32.549	Cyprinodon_variegatus
ENSCSAVG00000002974	-	75	32.573	ENSDARG00000104111	mrps30	65	32.508	Danio_rerio
ENSCSAVG00000002974	-	78	30.745	ENSDNOG00000006691	MRPS30	67	31.056	Dasypus_novemcinctus
ENSCSAVG00000002974	-	78	32.198	ENSDORG00000014828	Mrps30	65	32.198	Dipodomys_ordii
ENSCSAVG00000002974	-	79	32.198	ENSETEG00000006266	MRPS30	67	32.198	Echinops_telfairi
ENSCSAVG00000002974	-	70	32.639	ENSEBUG00000016559	mrps30	59	32.639	Eptatretus_burgeri
ENSCSAVG00000002974	-	76	31.511	ENSEASG00005013467	MRPS30	67	31.875	Equus_asinus_asinus
ENSCSAVG00000002974	-	76	31.511	ENSECAG00000009350	MRPS30	66	31.875	Equus_caballus
ENSCSAVG00000002974	-	63	31.783	ENSEEUG00000013893	MRPS30	61	32.184	Erinaceus_europaeus
ENSCSAVG00000002974	-	69	31.707	ENSELUG00000014642	mrps30	59	31.707	Esox_lucius
ENSCSAVG00000002974	-	78	30.960	ENSFCAG00000028632	MRPS30	66	30.960	Felis_catus
ENSCSAVG00000002974	-	69	33.449	ENSFALG00000011219	MRPS30	55	33.449	Ficedula_albicollis
ENSCSAVG00000002974	-	78	31.269	ENSFDAG00000019454	MRPS30	67	31.269	Fukomys_damarensis
ENSCSAVG00000002974	-	80	31.024	ENSFHEG00000004052	mrps30	70	31.024	Fundulus_heteroclitus
ENSCSAVG00000002974	-	70	32.639	ENSGMOG00000012960	mrps30	60	32.639	Gadus_morhua
ENSCSAVG00000002974	-	69	31.469	ENSGALG00000014874	MRPS30	54	31.469	Gallus_gallus
ENSCSAVG00000002974	-	77	31.447	ENSGAFG00000016889	mrps30	67	31.447	Gambusia_affinis
ENSCSAVG00000002974	-	78	30.247	ENSGAGG00000014136	MRPS30	70	30.247	Gopherus_agassizii
ENSCSAVG00000002974	-	78	31.269	ENSGGOG00000016095	MRPS30	66	31.269	Gorilla_gorilla
ENSCSAVG00000002974	-	79	30.000	ENSHBUG00000000852	mrps30	70	30.000	Haplochromis_burtoni
ENSCSAVG00000002974	-	78	30.938	ENSHGLG00000007915	MRPS30	67	30.938	Heterocephalus_glaber_female
ENSCSAVG00000002974	-	78	30.625	ENSHGLG00100015140	MRPS30	67	30.625	Heterocephalus_glaber_male
ENSCSAVG00000002974	-	66	32.847	ENSHCOG00000008085	mrps30	57	32.867	Hippocampus_comes
ENSCSAVG00000002974	-	79	30.982	ENSIPUG00000015530	mrps30	72	31.751	Ictalurus_punctatus
ENSCSAVG00000002974	-	78	31.250	ENSSTOG00000015844	MRPS30	67	31.250	Ictidomys_tridecemlineatus
ENSCSAVG00000002974	-	63	32.046	ENSJJAG00000007272	Mrps30	59	32.046	Jaculus_jaculus
ENSCSAVG00000002974	-	79	32.326	ENSLBEG00000026237	mrps30	68	32.326	Labrus_bergylta
ENSCSAVG00000002974	-	69	31.707	ENSLOCG00000011976	mrps30	59	31.707	Lepisosteus_oculatus
ENSCSAVG00000002974	-	75	31.090	ENSLAFG00000005809	MRPS30	68	30.861	Loxodonta_africana
ENSCSAVG00000002974	-	78	30.650	ENSMFAG00000037068	MRPS30	66	30.650	Macaca_fascicularis
ENSCSAVG00000002974	-	78	30.650	ENSMMUG00000016180	MRPS30	66	30.650	Macaca_mulatta
ENSCSAVG00000002974	-	82	30.088	ENSMNEG00000040760	MRPS30	67	30.556	Macaca_nemestrina
ENSCSAVG00000002974	-	78	31.269	ENSMLEG00000029243	MRPS30	66	31.269	Mandrillus_leucophaeus
ENSCSAVG00000002974	-	79	30.488	ENSMAMG00000006544	mrps30	70	30.488	Mastacembelus_armatus
ENSCSAVG00000002974	-	78	30.960	ENSMAUG00000013462	Mrps30	66	30.960	Mesocricetus_auratus
ENSCSAVG00000002974	-	70	32.069	ENSMICG00000008017	MRPS30	67	32.000	Microcebus_murinus
ENSCSAVG00000002974	-	78	30.488	ENSMOCG00000019175	Mrps30	66	30.488	Microtus_ochrogaster
ENSCSAVG00000002974	-	78	31.562	ENSMODG00000020268	MRPS30	68	31.562	Monodelphis_domestica
ENSCSAVG00000002974	-	79	31.889	ENSMALG00000005101	mrps30	68	31.889	Monopterus_albus
ENSCSAVG00000002974	-	71	30.872	MGP_CAROLIEiJ_G0018921	Mrps30	59	30.872	Mus_caroli
ENSCSAVG00000002974	-	78	31.098	ENSMUSG00000021731	Mrps30	65	31.098	Mus_musculus
ENSCSAVG00000002974	-	71	31.208	MGP_PahariEiJ_G0015991	Mrps30	65	30.303	Mus_pahari
ENSCSAVG00000002974	-	78	30.488	MGP_SPRETEiJ_G0019800	Mrps30	65	30.488	Mus_spretus
ENSCSAVG00000002974	-	71	31.741	ENSMPUG00000014405	MRPS30	68	31.579	Mustela_putorius_furo
ENSCSAVG00000002974	-	78	31.481	ENSMLUG00000006240	MRPS30	65	31.481	Myotis_lucifugus
ENSCSAVG00000002974	-	71	30.872	ENSNGAG00000016518	Mrps30	66	30.488	Nannospalax_galili
ENSCSAVG00000002974	-	78	30.650	ENSNLEG00000010605	MRPS30	66	30.650	Nomascus_leucogenys
ENSCSAVG00000002974	-	79	30.275	ENSONIG00000016926	mrps30	70	30.275	Oreochromis_niloticus
ENSCSAVG00000002974	-	63	34.082	ENSOANG00000001659	-	95	34.082	Ornithorhynchus_anatinus
ENSCSAVG00000002974	-	71	30.743	ENSOCUG00000004207	MRPS30	65	30.743	Oryctolagus_cuniculus
ENSCSAVG00000002974	-	78	30.650	ENSORLG00000001227	mrps30	68	30.650	Oryzias_latipes
ENSCSAVG00000002974	-	78	30.650	ENSORLG00020009592	mrps30	68	30.650	Oryzias_latipes_hni
ENSCSAVG00000002974	-	63	31.801	ENSORLG00015018948	mrps30	52	31.801	Oryzias_latipes_hsok
ENSCSAVG00000002974	-	78	30.960	ENSORLG00015018671	mrps30	68	30.960	Oryzias_latipes_hsok
ENSCSAVG00000002974	-	78	31.385	ENSOMEG00000012836	mrps30	68	31.385	Oryzias_melastigma
ENSCSAVG00000002974	-	78	30.218	ENSOARG00000008516	MRPS30	67	30.218	Ovis_aries
ENSCSAVG00000002974	-	78	30.650	ENSPPAG00000030590	MRPS30	66	31.269	Pan_paniscus
ENSCSAVG00000002974	-	78	30.650	ENSPPRG00000001754	MRPS30	67	30.650	Panthera_pardus
ENSCSAVG00000002974	-	78	30.960	ENSPTIG00000016940	MRPS30	75	30.960	Panthera_tigris_altaica
ENSCSAVG00000002974	-	78	30.650	ENSPTRG00000016854	MRPS30	66	31.269	Pan_troglodytes
ENSCSAVG00000002974	-	78	31.269	ENSPANG00000004116	MRPS30	66	31.269	Papio_anubis
ENSCSAVG00000002974	-	78	30.769	ENSPKIG00000024011	mrps30	69	30.861	Paramormyrops_kingsleyae
ENSCSAVG00000002974	-	78	31.464	ENSPSIG00000004270	MRPS30	69	31.464	Pelodiscus_sinensis
ENSCSAVG00000002974	-	79	31.098	ENSPMGG00000006586	mrps30	68	31.098	Periophthalmus_magnuspinnatus
ENSCSAVG00000002974	-	57	33.478	ENSPEMG00000019509	Mrps30	81	33.478	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002974	-	72	32.226	ENSPMAG00000001635	mrps30	68	32.226	Petromyzon_marinus
ENSCSAVG00000002974	-	78	30.960	ENSPCIG00000023080	-	68	30.960	Phascolarctos_cinereus
ENSCSAVG00000002974	-	79	30.982	ENSPFOG00000007213	mrps30	69	30.982	Poecilia_formosa
ENSCSAVG00000002974	-	79	31.288	ENSPLAG00000004649	mrps30	69	31.288	Poecilia_latipinna
ENSCSAVG00000002974	-	79	30.675	ENSPMEG00000017497	mrps30	69	30.675	Poecilia_mexicana
ENSCSAVG00000002974	-	79	30.769	ENSPREG00000008014	mrps30	69	30.769	Poecilia_reticulata
ENSCSAVG00000002974	-	78	30.625	ENSPCAG00000001587	MRPS30	67	30.625	Procavia_capensis
ENSCSAVG00000002974	-	78	32.000	ENSPCOG00000018431	MRPS30	67	32.000	Propithecus_coquereli
ENSCSAVG00000002974	-	71	31.399	ENSPVAG00000002302	MRPS30	67	30.960	Pteropus_vampyrus
ENSCSAVG00000002974	-	79	30.091	ENSPNYG00000016992	mrps30	70	30.000	Pundamilia_nyererei
ENSCSAVG00000002974	-	79	31.288	ENSPNAG00000029888	mrps30	60	31.288	Pygocentrus_nattereri
ENSCSAVG00000002974	-	78	30.650	ENSRNOG00000012136	Mrps30	66	30.650	Rattus_norvegicus
ENSCSAVG00000002974	-	78	31.385	ENSRROG00000033687	MRPS30	66	31.385	Rhinopithecus_roxellana
ENSCSAVG00000002974	-	69	32.517	ENSSBOG00000034220	MRPS30	67	31.692	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002974	-	80	30.606	ENSSHAG00000005755	MRPS30	69	30.606	Sarcophilus_harrisii
ENSCSAVG00000002974	-	79	30.488	ENSSMAG00000008392	mrps30	67	30.488	Scophthalmus_maximus
ENSCSAVG00000002974	-	70	30.584	ENSSDUG00000022416	mrps30	59	30.584	Seriola_dumerili
ENSCSAVG00000002974	-	69	32.862	ENSSLDG00000004595	mrps30	58	32.862	Seriola_lalandi_dorsalis
ENSCSAVG00000002974	-	70	32.180	ENSSPUG00000014071	MRPS30	70	30.982	Sphenodon_punctatus
ENSCSAVG00000002974	-	79	30.982	ENSSPAG00000013705	mrps30	64	30.982	Stegastes_partitus
ENSCSAVG00000002974	-	72	30.233	ENSSSCG00000032275	MRPS30	66	30.233	Sus_scrofa
ENSCSAVG00000002974	-	69	32.867	ENSTGUG00000002337	MRPS30	65	32.867	Taeniopygia_guttata
ENSCSAVG00000002974	-	79	31.692	ENSTRUG00000025594	mrps30	69	31.692	Takifugu_rubripes
ENSCSAVG00000002974	-	79	31.595	ENSTNIG00000015579	mrps30	70	31.595	Tetraodon_nigroviridis
ENSCSAVG00000002974	-	78	30.606	ENSTBEG00000005825	MRPS30	66	30.606	Tupaia_belangeri
ENSCSAVG00000002974	-	78	30.218	ENSTTRG00000008025	MRPS30	67	30.218	Tursiops_truncatus
ENSCSAVG00000002974	-	69	32.168	ENSUMAG00000005883	MRPS30	94	32.168	Ursus_maritimus
ENSCSAVG00000002974	-	69	31.095	ENSVPAG00000007070	MRPS30	57	31.095	Vicugna_pacos
ENSCSAVG00000002974	-	71	37.241	ENSXETG00000017716	mrps30	68	37.241	Xenopus_tropicalis
ENSCSAVG00000002974	-	79	30.982	ENSXCOG00000009616	mrps30	69	30.982	Xiphophorus_couchianus
ENSCSAVG00000002974	-	77	31.348	ENSXMAG00000003123	mrps30	67	31.348	Xiphophorus_maculatus