EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10369 bases
Position: chrreftig_132:76331-86699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004994	Methyltransf_31	PF13847.6	2.1e-13	1	1
ENSCSAVP00000004995	Methyltransf_31	PF13847.6	5.3e-12	1	1
ENSCSAVP00000004996	Methyltransf_31	PF13847.6	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005065	-	2147	-	ENSCSAVP00000004994	692 (aa)	-	H2YI45
ENSCSAVT00000005067	-	1917	-	ENSCSAVP00000004996	639 (aa)	-	H2YI47
ENSCSAVT00000005066	-	1656	-	ENSCSAVP00000004995	552 (aa)	-	H2YI46

Gene Model

Click here to download ENSCSAVG00000002978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002978	-	98	47.107	ENSG00000010165	EEF1AKNMT	91	52.980	Homo_sapiens
ENSCSAVG00000002978	-	100	37.517	ENSAPOG00000019423	mettl13	100	37.815	Acanthochromis_polyacanthus
ENSCSAVG00000002978	-	92	43.611	ENSACIG00000013889	mettl13	92	38.275	Amphilophus_citrinellus
ENSCSAVG00000002978	-	100	36.872	ENSAOCG00000002679	mettl13	100	37.167	Amphiprion_ocellaris
ENSCSAVG00000002978	-	100	36.732	ENSAPEG00000012673	mettl13	100	37.027	Amphiprion_percula
ENSCSAVG00000002978	-	97	42.222	ENSATEG00000016999	mettl13	99	36.996	Anabas_testudineus
ENSCSAVG00000002978	-	85	46.769	ENSAPLG00000004413	EEF1AKNMT	89	40.382	Anas_platyrhynchos
ENSCSAVG00000002978	-	99	45.013	ENSACAG00000012638	EEF1AKNMT	94	39.439	Anolis_carolinensis
ENSCSAVG00000002978	-	98	47.107	ENSANAG00000022221	EEF1AKNMT	95	40.580	Aotus_nancymaae
ENSCSAVG00000002978	-	100	37.135	ENSACLG00000013194	mettl13	100	37.241	Astatotilapia_calliptera
ENSCSAVG00000002978	-	97	43.213	ENSAMXG00000012760	mettl13	100	36.704	Astyanax_mexicanus
ENSCSAVG00000002978	-	98	46.995	ENSBTAG00000017721	EEF1AKNMT	93	39.788	Bos_taurus
ENSCSAVG00000002978	-	93	33.728	WBGene00015282	C01B10.8	78	33.728	Caenorhabditis_elegans
ENSCSAVG00000002978	-	98	46.556	ENSCJAG00000009633	EEF1AKNMT	90	39.671	Callithrix_jacchus
ENSCSAVG00000002978	-	90	46.556	ENSCAFG00000014885	-	100	39.936	Canis_familiaris
ENSCSAVG00000002978	-	98	46.556	ENSCAFG00000029162	-	93	40.060	Canis_familiaris
ENSCSAVG00000002978	-	98	46.556	ENSCAFG00020021213	EEF1AKNMT	93	40.060	Canis_lupus_dingo
ENSCSAVG00000002978	-	98	46.995	ENSCHIG00000021452	EEF1AKNMT	98	39.658	Capra_hircus
ENSCSAVG00000002978	-	98	46.281	ENSTSYG00000012467	EEF1AKNMT	93	39.521	Carlito_syrichta
ENSCSAVG00000002978	-	72	44.872	ENSCAPG00000017409	EEF1AKNMT	79	38.973	Cavia_aperea
ENSCSAVG00000002978	-	98	46.832	ENSCPOG00000004377	EEF1AKNMT	93	39.032	Cavia_porcellus
ENSCSAVG00000002978	-	98	47.107	ENSCCAG00000022211	EEF1AKNMT	93	40.120	Cebus_capucinus
ENSCSAVG00000002978	-	98	47.107	ENSCATG00000021485	EEF1AKNMT	86	47.107	Cercocebus_atys
ENSCSAVG00000002978	-	98	47.107	ENSCLAG00000014345	EEF1AKNMT	93	40.630	Chinchilla_lanigera
ENSCSAVG00000002978	-	98	47.383	ENSCSAG00000011646	EEF1AKNMT	86	47.383	Chlorocebus_sabaeus
ENSCSAVG00000002978	-	99	47.397	ENSCHOG00000004871	EEF1AKNMT	99	38.881	Choloepus_hoffmanni
ENSCSAVG00000002978	-	77	45.515	ENSCPBG00000017017	EEF1AKNMT	89	40.399	Chrysemys_picta_bellii
ENSCSAVG00000002978	-	99	68.169	ENSCING00000024131	-	100	58.097	Ciona_intestinalis
ENSCSAVG00000002978	-	98	47.107	ENSCANG00000001873	EEF1AKNMT	86	47.107	Colobus_angolensis_palliatus
ENSCSAVG00000002978	-	98	48.485	ENSCGRG00001014417	Mettl13	93	40.957	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002978	-	98	48.485	ENSCGRG00000009062	Mettl13	93	40.957	Cricetulus_griseus_crigri
ENSCSAVG00000002978	-	97	44.693	ENSCSEG00000004233	mettl13	99	39.106	Cynoglossus_semilaevis
ENSCSAVG00000002978	-	98	41.783	ENSCVAG00000003860	mettl13	93	35.332	Cyprinodon_variegatus
ENSCSAVG00000002978	-	97	44.809	ENSDARG00000010905	mettl13	99	42.208	Danio_rerio
ENSCSAVG00000002978	-	97	44.751	ENSDORG00000011976	Mettl13	96	38.340	Dipodomys_ordii
ENSCSAVG00000002978	-	99	38.592	FBgn0032873	CG2614	100	35.434	Drosophila_melanogaster
ENSCSAVG00000002978	-	98	46.281	ENSETEG00000015471	-	93	39.583	Echinops_telfairi
ENSCSAVG00000002978	-	73	43.810	ENSETEG00000003655	-	59	43.810	Echinops_telfairi
ENSCSAVG00000002978	-	99	34.383	ENSEBUG00000011508	mettl13	91	35.076	Eptatretus_burgeri
ENSCSAVG00000002978	-	98	47.814	ENSEASG00005018330	EEF1AKNMT	88	46.759	Equus_asinus_asinus
ENSCSAVG00000002978	-	98	47.541	ENSECAG00000018565	EEF1AKNMT	93	40.393	Equus_caballus
ENSCSAVG00000002978	-	89	45.513	ENSEEUG00000000985	EEF1AKNMT	100	36.826	Erinaceus_europaeus
ENSCSAVG00000002978	-	97	43.697	ENSELUG00000000238	mettl13	100	37.293	Esox_lucius
ENSCSAVG00000002978	-	98	47.268	ENSFCAG00000025669	EEF1AKNMT	93	39.788	Felis_catus
ENSCSAVG00000002978	-	99	46.849	ENSFALG00000007811	EEF1AKNMT	89	40.841	Ficedula_albicollis
ENSCSAVG00000002978	-	98	47.107	ENSFDAG00000017108	EEF1AKNMT	93	40.299	Fukomys_damarensis
ENSCSAVG00000002978	-	100	40.591	ENSFHEG00000000968	mettl13	94	35.863	Fundulus_heteroclitus
ENSCSAVG00000002978	-	99	43.137	ENSGMOG00000012344	mettl13	100	36.582	Gadus_morhua
ENSCSAVG00000002978	-	99	46.301	ENSGALG00000003206	EEF1AKNMT	93	40.512	Gallus_gallus
ENSCSAVG00000002978	-	97	39.433	ENSGAFG00000006873	mettl13	84	49.664	Gambusia_affinis
ENSCSAVG00000002978	-	97	42.500	ENSGACG00000014705	mettl13	99	37.396	Gasterosteus_aculeatus
ENSCSAVG00000002978	-	87	44.667	ENSGAGG00000018083	EEF1AKNMT	98	39.117	Gopherus_agassizii
ENSCSAVG00000002978	-	98	47.107	ENSGGOG00000027207	-	93	40.120	Gorilla_gorilla
ENSCSAVG00000002978	-	90	47.107	ENSGGOG00000004671	-	98	40.320	Gorilla_gorilla
ENSCSAVG00000002978	-	100	37.135	ENSHBUG00000017712	mettl13	100	37.225	Haplochromis_burtoni
ENSCSAVG00000002978	-	98	47.814	ENSHGLG00000011737	METTL13	98	40.456	Heterocephalus_glaber_female
ENSCSAVG00000002978	-	98	47.814	ENSHGLG00100001495	METTL13	98	40.456	Heterocephalus_glaber_male
ENSCSAVG00000002978	-	93	44.199	ENSHCOG00000017290	mettl13	100	37.183	Hippocampus_comes
ENSCSAVG00000002978	-	97	42.936	ENSIPUG00000012806	mettl13	97	36.454	Ictalurus_punctatus
ENSCSAVG00000002978	-	98	47.541	ENSSTOG00000003852	EEF1AKNMT	93	40.658	Ictidomys_tridecemlineatus
ENSCSAVG00000002978	-	98	47.268	ENSJJAG00000020197	Mettl13	93	40.658	Jaculus_jaculus
ENSCSAVG00000002978	-	97	42.897	ENSKMAG00000003207	mettl13	99	36.746	Kryptolebias_marmoratus
ENSCSAVG00000002978	-	92	43.611	ENSLBEG00000008944	mettl13	99	36.530	Labrus_bergylta
ENSCSAVG00000002978	-	99	48.907	ENSLACG00000011875	EEF1AKNMT	96	41.064	Latimeria_chalumnae
ENSCSAVG00000002978	-	64	42.700	ENSLOCG00000010429	mettl13	96	42.727	Lepisosteus_oculatus
ENSCSAVG00000002978	-	98	47.383	ENSLAFG00000008601	EEF1AKNMT	90	46.065	Loxodonta_africana
ENSCSAVG00000002978	-	98	47.107	ENSMFAG00000045158	EEF1AKNMT	93	40.120	Macaca_fascicularis
ENSCSAVG00000002978	-	98	47.107	ENSMMUG00000007266	EEF1AKNMT	93	40.120	Macaca_mulatta
ENSCSAVG00000002978	-	98	47.107	ENSMNEG00000035859	EEF1AKNMT	86	47.107	Macaca_nemestrina
ENSCSAVG00000002978	-	98	47.107	ENSMLEG00000029475	EEF1AKNMT	93	40.120	Mandrillus_leucophaeus
ENSCSAVG00000002978	-	97	44.444	ENSMAMG00000016683	mettl13	99	37.796	Mastacembelus_armatus
ENSCSAVG00000002978	-	100	37.135	ENSMZEG00005019629	mettl13	100	37.241	Maylandia_zebra
ENSCSAVG00000002978	-	99	47.814	ENSMGAG00000004201	EEF1AKNMT	93	41.578	Meleagris_gallopavo
ENSCSAVG00000002978	-	98	48.209	ENSMAUG00000021447	Mettl13	93	40.807	Mesocricetus_auratus
ENSCSAVG00000002978	-	98	46.995	ENSMICG00000037588	EEF1AKNMT	93	39.939	Microcebus_murinus
ENSCSAVG00000002978	-	98	48.485	ENSMOCG00000011261	Mettl13	99	39.301	Microtus_ochrogaster
ENSCSAVG00000002978	-	96	43.785	ENSMMOG00000003239	mettl13	84	49.342	Mola_mola
ENSCSAVG00000002978	-	99	47.978	ENSMODG00000003886	EEF1AKNMT	99	39.281	Monodelphis_domestica
ENSCSAVG00000002978	-	97	43.417	ENSMALG00000007161	mettl13	99	37.588	Monopterus_albus
ENSCSAVG00000002978	-	99	48.098	MGP_CAROLIEiJ_G0014771	Mettl13	93	40.896	Mus_caroli
ENSCSAVG00000002978	-	99	48.098	ENSMUSG00000026694	Mettl13	93	41.343	Mus_musculus
ENSCSAVG00000002978	-	99	47.139	MGP_PahariEiJ_G0028008	Mettl13	98	39.972	Mus_pahari
ENSCSAVG00000002978	-	99	48.370	MGP_SPRETEiJ_G0015578	Mettl13	87	48.370	Mus_spretus
ENSCSAVG00000002978	-	89	45.192	ENSMPUG00000015625	EEF1AKNMT	90	38.003	Mustela_putorius_furo
ENSCSAVG00000002978	-	98	47.814	ENSMLUG00000012259	EEF1AKNMT	99	39.038	Myotis_lucifugus
ENSCSAVG00000002978	-	98	47.658	ENSNGAG00000017426	Mettl13	93	40.746	Nannospalax_galili
ENSCSAVG00000002978	-	100	36.908	ENSNBRG00000023713	mettl13	100	37.017	Neolamprologus_brichardi
ENSCSAVG00000002978	-	98	47.107	ENSNLEG00000015209	EEF1AKNMT	93	40.120	Nomascus_leucogenys
ENSCSAVG00000002978	-	98	46.175	ENSODEG00000013057	EEF1AKNMT	93	40.120	Octodon_degus
ENSCSAVG00000002978	-	100	36.981	ENSONIG00000002768	mettl13	100	37.291	Oreochromis_niloticus
ENSCSAVG00000002978	-	92	32.879	ENSOANG00000000905	EEF1AKNMT	99	33.636	Ornithorhynchus_anatinus
ENSCSAVG00000002978	-	98	47.814	ENSOCUG00000008257	EEF1AKNMT	93	40.242	Oryctolagus_cuniculus
ENSCSAVG00000002978	-	98	42.265	ENSORLG00000022310	mettl13	93	42.265	Oryzias_latipes
ENSCSAVG00000002978	-	98	41.989	ENSORLG00020008764	mettl13	93	41.989	Oryzias_latipes_hni
ENSCSAVG00000002978	-	100	34.015	ENSORLG00015004926	mettl13	93	42.265	Oryzias_latipes_hsok
ENSCSAVG00000002978	-	99	38.095	ENSOMEG00000023355	mettl13	77	44.598	Oryzias_melastigma
ENSCSAVG00000002978	-	98	47.658	ENSOGAG00000011755	EEF1AKNMT	93	40.091	Otolemur_garnettii
ENSCSAVG00000002978	-	98	46.995	ENSOARG00000013736	EEF1AKNMT	98	39.658	Ovis_aries
ENSCSAVG00000002978	-	98	47.107	ENSPPAG00000039457	EEF1AKNMT	86	47.107	Pan_paniscus
ENSCSAVG00000002978	-	98	47.268	ENSPPRG00000006545	EEF1AKNMT	93	40.060	Panthera_pardus
ENSCSAVG00000002978	-	98	47.107	ENSPTRG00000001682	EEF1AKNMT	86	47.107	Pan_troglodytes
ENSCSAVG00000002978	-	98	47.107	ENSPANG00000013789	EEF1AKNMT	97	40.419	Papio_anubis
ENSCSAVG00000002978	-	93	34.731	ENSPKIG00000009076	mettl13	97	34.731	Paramormyrops_kingsleyae
ENSCSAVG00000002978	-	55	45.938	ENSPSIG00000007651	EEF1AKNMT	93	43.133	Pelodiscus_sinensis
ENSCSAVG00000002978	-	97	44.321	ENSPMGG00000013233	mettl13	92	37.842	Periophthalmus_magnuspinnatus
ENSCSAVG00000002978	-	98	47.802	ENSPEMG00000019591	Mettl13	93	40.746	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002978	-	99	46.524	ENSPCIG00000029847	EEF1AKNMT	86	39.034	Phascolarctos_cinereus
ENSCSAVG00000002978	-	97	42.458	ENSPFOG00000014838	mettl13	94	38.131	Poecilia_formosa
ENSCSAVG00000002978	-	97	42.179	ENSPLAG00000014327	mettl13	94	38.131	Poecilia_latipinna
ENSCSAVG00000002978	-	97	42.737	ENSPMEG00000002612	mettl13	94	38.279	Poecilia_mexicana
ENSCSAVG00000002978	-	97	42.179	ENSPREG00000000863	mettl13	94	38.131	Poecilia_reticulata
ENSCSAVG00000002978	-	98	47.107	ENSPPYG00000000509	EEF1AKNMT	95	39.678	Pongo_abelii
ENSCSAVG00000002978	-	98	47.107	ENSPCAG00000005276	EEF1AKNMT	98	40.419	Procavia_capensis
ENSCSAVG00000002978	-	98	47.123	ENSPCOG00000016474	EEF1AKNMT	99	38.990	Propithecus_coquereli
ENSCSAVG00000002978	-	100	37.135	ENSPNYG00000008414	mettl13	100	37.379	Pundamilia_nyererei
ENSCSAVG00000002978	-	97	42.105	ENSPNAG00000007903	mettl13	99	36.415	Pygocentrus_nattereri
ENSCSAVG00000002978	-	98	47.107	ENSRROG00000038013	EEF1AKNMT	86	47.107	Rhinopithecus_roxellana
ENSCSAVG00000002978	-	99	46.216	ENSSBOG00000028175	EEF1AKNMT	95	40.258	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002978	-	98	48.128	ENSSHAG00000017290	EEF1AKNMT	99	39.202	Sarcophilus_harrisii
ENSCSAVG00000002978	-	97	42.577	ENSSFOG00015002093	mettl13	99	37.011	Scleropages_formosus
ENSCSAVG00000002978	-	97	43.333	ENSSMAG00000017192	mettl13	99	37.115	Scophthalmus_maximus
ENSCSAVG00000002978	-	97	43.611	ENSSDUG00000016028	mettl13	99	37.187	Seriola_dumerili
ENSCSAVG00000002978	-	97	43.333	ENSSLDG00000018397	mettl13	95	51.765	Seriola_lalandi_dorsalis
ENSCSAVG00000002978	-	97	43.333	ENSSPAG00000014359	mettl13	100	37.187	Stegastes_partitus
ENSCSAVG00000002978	-	98	46.866	ENSSSCG00000015483	EEF1AKNMT	99	47.541	Sus_scrofa
ENSCSAVG00000002978	-	99	47.123	ENSTGUG00000017274	EEF1AKNMT	95	41.124	Taeniopygia_guttata
ENSCSAVG00000002978	-	97	44.972	ENSTRUG00000016505	mettl13	93	41.033	Takifugu_rubripes
ENSCSAVG00000002978	-	99	45.098	ENSTNIG00000002653	mettl13	100	39.155	Tetraodon_nigroviridis
ENSCSAVG00000002978	-	98	46.995	ENSTTRG00000005192	EEF1AKNMT	99	37.058	Tursiops_truncatus
ENSCSAVG00000002978	-	99	47.658	ENSUAMG00000002862	EEF1AKNMT	93	46.528	Ursus_americanus
ENSCSAVG00000002978	-	98	47.658	ENSUMAG00000017931	EEF1AKNMT	93	40.091	Ursus_maritimus
ENSCSAVG00000002978	-	98	46.556	ENSVVUG00000014638	EEF1AKNMT	93	40.060	Vulpes_vulpes
ENSCSAVG00000002978	-	99	45.504	ENSXETG00000010438	eef1aknmt	93	40.000	Xenopus_tropicalis
ENSCSAVG00000002978	-	97	41.899	ENSXCOG00000008785	mettl13	94	38.599	Xiphophorus_couchianus
ENSCSAVG00000002978	-	97	41.899	ENSXMAG00000011288	mettl13	94	38.599	Xiphophorus_maculatus