EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003023 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2220 bases
Position: chrreftig_1:597154-599373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005066	ResIII	PF04851.15	3.6e-06	1	1
ENSCSAVP00000005066	DEAD	PF00270.29	2.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005137	-	1683	-	ENSCSAVP00000005066	561 (aa)	-	H2YIB7

Gene Model

Click here to download ENSCSAVG00000003023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003023	-	63	35.674	ENSCSAVG00000008916	-	98	36.095
ENSCSAVG00000003023	-	66	33.248	ENSCSAVG00000002353	-	74	31.724
ENSCSAVG00000003023	-	55	33.861	ENSCSAVG00000006949	-	64	33.861
ENSCSAVG00000003023	-	58	30.423	ENSCSAVG00000010817	-	57	30.688
ENSCSAVG00000003023	-	62	40.227	ENSCSAVG00000011566	-	77	40.227
ENSCSAVG00000003023	-	62	31.714	ENSCSAVG00000002162	-	82	30.685
ENSCSAVG00000003023	-	58	31.548	ENSCSAVG00000003835	-	83	30.814
ENSCSAVG00000003023	-	63	30.194	ENSCSAVG00000003045	-	87	30.194
ENSCSAVG00000003023	-	77	42.529	ENSCSAVG00000004895	-	81	42.529
ENSCSAVG00000003023	-	73	31.808	ENSCSAVG00000004304	-	67	31.674
ENSCSAVG00000003023	-	54	30.149	ENSCSAVG00000004158	-	68	30.149
ENSCSAVG00000003023	-	60	33.235	ENSCSAVG00000000630	-	95	32.791
ENSCSAVG00000003023	-	83	33.017	ENSCSAVG00000004227	-	86	35.811
ENSCSAVG00000003023	-	71	34.211	ENSCSAVG00000000522	-	95	34.211
ENSCSAVG00000003023	-	60	32.344	ENSCSAVG00000009920	-	89	32.344
ENSCSAVG00000003023	-	78	34.649	ENSCSAVG00000003375	-	83	34.348
ENSCSAVG00000003023	-	58	35.435	ENSCSAVG00000002180	-	86	34.311

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003023	-	89	56.189	ENSG00000178105	DDX10	67	60.706	Homo_sapiens
ENSCSAVG00000003023	-	81	59.956	ENSAPOG00000009242	ddx10	56	58.403	Acanthochromis_polyacanthus
ENSCSAVG00000003023	-	82	60.349	ENSAMEG00000009232	DDX10	70	60.349	Ailuropoda_melanoleuca
ENSCSAVG00000003023	-	87	57.200	ENSACIG00000012927	ddx10	56	59.792	Amphilophus_citrinellus
ENSCSAVG00000003023	-	81	60.394	ENSAOCG00000021917	ddx10	56	58.824	Amphiprion_ocellaris
ENSCSAVG00000003023	-	82	60.349	ENSAPEG00000022230	ddx10	56	59.034	Amphiprion_percula
ENSCSAVG00000003023	-	83	59.698	ENSATEG00000007227	ddx10	57	58.506	Anabas_testudineus
ENSCSAVG00000003023	-	87	56.436	ENSAPLG00000011942	DDX10	61	60.619	Anas_platyrhynchos
ENSCSAVG00000003023	-	86	58.111	ENSACAG00000005173	DDX10	60	61.298	Anolis_carolinensis
ENSCSAVG00000003023	-	94	54.089	ENSANAG00000020864	DDX10	65	58.723	Aotus_nancymaae
ENSCSAVG00000003023	-	87	56.000	ENSACLG00000003559	ddx10	59	55.992	Astatotilapia_calliptera
ENSCSAVG00000003023	-	90	56.805	ENSAMXG00000006135	ddx10	59	59.167	Astyanax_mexicanus
ENSCSAVG00000003023	-	89	56.250	ENSBTAG00000002382	DDX10	58	56.140	Bos_taurus
ENSCSAVG00000003023	-	80	51.778	WBGene00021277	Y23H5B.6	61	51.778	Caenorhabditis_elegans
ENSCSAVG00000003023	-	83	59.395	ENSCJAG00000010281	DDX10	53	59.395	Callithrix_jacchus
ENSCSAVG00000003023	-	81	60.927	ENSCAFG00000014324	DDX10	52	60.927	Canis_familiaris
ENSCSAVG00000003023	-	81	60.927	ENSCAFG00020007058	DDX10	52	60.927	Canis_lupus_dingo
ENSCSAVG00000003023	-	89	56.250	ENSCHIG00000015147	DDX10	58	56.140	Capra_hircus
ENSCSAVG00000003023	-	81	59.823	ENSTSYG00000003184	DDX10	53	59.823	Carlito_syrichta
ENSCSAVG00000003023	-	86	54.244	ENSCPOG00000000865	DDX10	50	56.416	Cavia_porcellus
ENSCSAVG00000003023	-	83	59.395	ENSCCAG00000024209	DDX10	53	59.395	Cebus_capucinus
ENSCSAVG00000003023	-	82	60.566	ENSCATG00000028487	DDX10	66	60.566	Cercocebus_atys
ENSCSAVG00000003023	-	81	60.841	ENSCLAG00000013463	DDX10	52	60.841	Chinchilla_lanigera
ENSCSAVG00000003023	-	88	57.980	ENSCPBG00000021681	DDX10	71	59.290	Chrysemys_picta_bellii
ENSCSAVG00000003023	-	88	77.282	ENSCING00000021618	-	69	78.643	Ciona_intestinalis
ENSCSAVG00000003023	-	89	56.778	ENSCANG00000027716	DDX10	54	59.619	Colobus_angolensis_palliatus
ENSCSAVG00000003023	-	92	56.167	ENSCGRG00001007099	Ddx10	53	60.085	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003023	-	92	56.167	ENSCGRG00000000153	Ddx10	53	60.085	Cricetulus_griseus_crigri
ENSCSAVG00000003023	-	81	60.307	ENSCSEG00000002080	ddx10	65	55.969	Cynoglossus_semilaevis
ENSCSAVG00000003023	-	85	55.975	ENSCVAG00000000109	ddx10	69	52.354	Cyprinodon_variegatus
ENSCSAVG00000003023	-	86	58.471	ENSDARG00000061865	ddx10	59	55.922	Danio_rerio
ENSCSAVG00000003023	-	89	55.166	ENSDNOG00000012542	DDX10	77	55.058	Dasypus_novemcinctus
ENSCSAVG00000003023	-	85	50.000	ENSDORG00000014459	Ddx10	52	49.792	Dipodomys_ordii
ENSCSAVG00000003023	-	81	51.586	FBgn0030855	CG5800	59	51.235	Drosophila_melanogaster
ENSCSAVG00000003023	-	88	54.274	ENSEBUG00000007794	ddx10	70	58.889	Eptatretus_burgeri
ENSCSAVG00000003023	-	89	56.445	ENSEASG00005010110	DDX10	59	56.335	Equus_asinus_asinus
ENSCSAVG00000003023	-	89	56.445	ENSECAG00000010355	DDX10	62	56.335	Equus_caballus
ENSCSAVG00000003023	-	81	52.759	ENSEEUG00000011164	DDX10	52	52.759	Erinaceus_europaeus
ENSCSAVG00000003023	-	89	55.299	ENSELUG00000014515	ddx10	52	60.486	Esox_lucius
ENSCSAVG00000003023	-	81	61.148	ENSFCAG00000007246	DDX10	52	61.148	Felis_catus
ENSCSAVG00000003023	-	69	61.440	ENSFALG00000000449	DDX10	51	61.440	Ficedula_albicollis
ENSCSAVG00000003023	-	87	56.627	ENSFHEG00000011340	ddx10	57	59.913	Fundulus_heteroclitus
ENSCSAVG00000003023	-	89	55.186	ENSGAFG00000011210	ddx10	59	58.125	Gambusia_affinis
ENSCSAVG00000003023	-	88	55.644	ENSGACG00000002948	ddx10	55	60.659	Gasterosteus_aculeatus
ENSCSAVG00000003023	-	90	56.461	ENSGAGG00000023967	DDX10	56	61.416	Gopherus_agassizii
ENSCSAVG00000003023	-	80	60.667	ENSGGOG00000000271	-	52	60.486	Gorilla_gorilla
ENSCSAVG00000003023	-	89	46.667	ENSGGOG00000043095	-	57	46.667	Gorilla_gorilla
ENSCSAVG00000003023	-	80	60.000	ENSGGOG00000043387	-	73	59.823	Gorilla_gorilla
ENSCSAVG00000003023	-	87	55.800	ENSHBUG00000012476	ddx10	58	55.796	Haplochromis_burtoni
ENSCSAVG00000003023	-	88	56.522	ENSHGLG00100003298	DDX10	64	60.667	Heterocephalus_glaber_male
ENSCSAVG00000003023	-	83	59.611	ENSHCOG00000010943	ddx10	57	59.611	Hippocampus_comes
ENSCSAVG00000003023	-	85	59.244	ENSIPUG00000024738	ddx10	56	59.956	Ictalurus_punctatus
ENSCSAVG00000003023	-	78	40.774	ENSIPUG00000012876	ddx18	81	39.451	Ictalurus_punctatus
ENSCSAVG00000003023	-	92	55.513	ENSSTOG00000005213	DDX10	74	61.062	Ictidomys_tridecemlineatus
ENSCSAVG00000003023	-	81	58.811	ENSJJAG00000014261	Ddx10	53	58.811	Jaculus_jaculus
ENSCSAVG00000003023	-	87	55.000	ENSKMAG00000001578	ddx10	58	56.900	Kryptolebias_marmoratus
ENSCSAVG00000003023	-	94	53.604	ENSLBEG00000011602	ddx10	64	54.302	Labrus_bergylta
ENSCSAVG00000003023	-	87	56.000	ENSLOCG00000002074	ddx10	60	60.491	Lepisosteus_oculatus
ENSCSAVG00000003023	-	89	56.189	ENSLAFG00000005951	DDX10	70	60.526	Loxodonta_africana
ENSCSAVG00000003023	-	82	60.566	ENSMMUG00000014415	DDX10	53	60.566	Macaca_mulatta
ENSCSAVG00000003023	-	82	60.566	ENSMNEG00000033513	DDX10	53	60.566	Macaca_nemestrina
ENSCSAVG00000003023	-	82	60.566	ENSMLEG00000044081	DDX10	66	60.566	Mandrillus_leucophaeus
ENSCSAVG00000003023	-	87	57.819	ENSMAMG00000022111	ddx10	56	57.287	Mastacembelus_armatus
ENSCSAVG00000003023	-	87	56.000	ENSMZEG00005003586	ddx10	59	55.992	Maylandia_zebra
ENSCSAVG00000003023	-	80	60.444	ENSMGAG00000015145	DDX10	76	60.444	Meleagris_gallopavo
ENSCSAVG00000003023	-	89	56.778	ENSMICG00000035071	DDX10	65	60.746	Microcebus_murinus
ENSCSAVG00000003023	-	88	56.917	ENSMOCG00000009915	Ddx10	51	61.111	Microtus_ochrogaster
ENSCSAVG00000003023	-	91	54.143	ENSMMOG00000009042	ddx10	56	58.030	Mola_mola
ENSCSAVG00000003023	-	82	58.824	ENSMODG00000014600	DDX10	51	58.824	Monodelphis_domestica
ENSCSAVG00000003023	-	82	60.087	ENSMALG00000021441	ddx10	58	58.750	Monopterus_albus
ENSCSAVG00000003023	-	88	56.917	MGP_CAROLIEiJ_G0032212	Ddx10	51	61.333	Mus_caroli
ENSCSAVG00000003023	-	88	56.917	ENSMUSG00000053289	Ddx10	51	61.333	Mus_musculus
ENSCSAVG00000003023	-	89	57.031	MGP_PahariEiJ_G0015080	Ddx10	51	61.556	Mus_pahari
ENSCSAVG00000003023	-	93	55.577	MGP_SPRETEiJ_G0033352	Ddx10	51	61.333	Mus_spretus
ENSCSAVG00000003023	-	81	60.927	ENSMPUG00000005921	DDX10	52	60.927	Mustela_putorius_furo
ENSCSAVG00000003023	-	89	53.045	ENSMLUG00000001645	DDX10	68	58.150	Myotis_lucifugus
ENSCSAVG00000003023	-	89	56.471	ENSNGAG00000010526	Ddx10	51	61.111	Nannospalax_galili
ENSCSAVG00000003023	-	88	56.126	ENSNBRG00000016684	ddx10	54	60.304	Neolamprologus_brichardi
ENSCSAVG00000003023	-	81	60.486	ENSNLEG00000007242	DDX10	52	60.486	Nomascus_leucogenys
ENSCSAVG00000003023	-	84	44.280	ENSOPRG00000004266	DDX10	58	44.280	Ochotona_princeps
ENSCSAVG00000003023	-	88	56.151	ENSONIG00000007263	ddx10	55	56.582	Oreochromis_niloticus
ENSCSAVG00000003023	-	93	55.888	ENSOANG00000006243	DDX10	72	60.684	Ornithorhynchus_anatinus
ENSCSAVG00000003023	-	83	60.259	ENSOCUG00000003843	DDX10	59	56.335	Oryctolagus_cuniculus
ENSCSAVG00000003023	-	96	51.892	ENSORLG00000003073	ddx10	57	58.246	Oryzias_latipes
ENSCSAVG00000003023	-	96	51.718	ENSORLG00015002672	ddx10	70	50.687	Oryzias_latipes_hsok
ENSCSAVG00000003023	-	86	57.320	ENSOMEG00000007443	ddx10	57	58.475	Oryzias_melastigma
ENSCSAVG00000003023	-	93	55.094	ENSOGAG00000010962	DDX10	71	59.448	Otolemur_garnettii
ENSCSAVG00000003023	-	89	56.008	ENSOARG00000012714	DDX10	78	55.899	Ovis_aries
ENSCSAVG00000003023	-	89	47.451	ENSPPAG00000032506	-	50	50.993	Pan_paniscus
ENSCSAVG00000003023	-	81	60.486	ENSPPAG00000035222	DDX10	52	60.486	Pan_paniscus
ENSCSAVG00000003023	-	81	61.148	ENSPPRG00000005990	DDX10	52	61.148	Panthera_pardus
ENSCSAVG00000003023	-	81	61.148	ENSPTIG00000010152	DDX10	52	61.148	Panthera_tigris_altaica
ENSCSAVG00000003023	-	89	47.647	ENSPTRG00000047351	-	51	51.214	Pan_troglodytes
ENSCSAVG00000003023	-	81	60.486	ENSPTRG00000004256	DDX10	52	60.486	Pan_troglodytes
ENSCSAVG00000003023	-	88	47.177	ENSPANG00000029813	-	50	52.358	Papio_anubis
ENSCSAVG00000003023	-	82	60.349	ENSPANG00000015325	DDX10	66	60.349	Papio_anubis
ENSCSAVG00000003023	-	83	59.829	ENSPKIG00000015739	ddx10	59	59.158	Paramormyrops_kingsleyae
ENSCSAVG00000003023	-	91	56.496	ENSPSIG00000014874	DDX10	81	60.171	Pelodiscus_sinensis
ENSCSAVG00000003023	-	88	56.189	ENSPMGG00000008344	ddx10	57	59.348	Periophthalmus_magnuspinnatus
ENSCSAVG00000003023	-	99	49.828	ENSPEMG00000017492	Ddx10	52	58.000	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003023	-	90	56.667	ENSPCIG00000003013	DDX10	86	60.988	Phascolarctos_cinereus
ENSCSAVG00000003023	-	89	55.577	ENSPFOG00000013021	ddx10	57	59.695	Poecilia_formosa
ENSCSAVG00000003023	-	89	55.577	ENSPLAG00000009048	ddx10	57	59.695	Poecilia_latipinna
ENSCSAVG00000003023	-	89	55.186	ENSPMEG00000004541	ddx10	57	59.695	Poecilia_mexicana
ENSCSAVG00000003023	-	89	55.186	ENSPREG00000019559	ddx10	57	57.928	Poecilia_reticulata
ENSCSAVG00000003023	-	80	61.111	ENSPPYG00000003849	DDX10	52	60.927	Pongo_abelii
ENSCSAVG00000003023	-	89	49.805	ENSPVAG00000007371	DDX10	58	49.708	Pteropus_vampyrus
ENSCSAVG00000003023	-	87	56.000	ENSPNYG00000001756	ddx10	59	55.992	Pundamilia_nyererei
ENSCSAVG00000003023	-	88	57.661	ENSPNAG00000017154	ddx10	61	57.661	Pygocentrus_nattereri
ENSCSAVG00000003023	-	88	56.324	ENSRNOG00000012500	Ddx10	51	60.667	Rattus_norvegicus
ENSCSAVG00000003023	-	88	54.150	ENSRBIG00000040612	DDX10	65	57.675	Rhinopithecus_bieti
ENSCSAVG00000003023	-	82	60.566	ENSRROG00000031744	DDX10	52	60.566	Rhinopithecus_roxellana
ENSCSAVG00000003023	-	81	49.784	YJL033W	HCA4	60	49.784	Saccharomyces_cerevisiae
ENSCSAVG00000003023	-	88	56.522	ENSSBOG00000022735	DDX10	69	59.197	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003023	-	61	64.140	ENSSHAG00000008417	-	99	64.140	Sarcophilus_harrisii
ENSCSAVG00000003023	-	94	52.632	ENSSFOG00015007982	ddx10	57	57.084	Scleropages_formosus
ENSCSAVG00000003023	-	81	60.746	ENSSMAG00000018735	ddx10	56	59.957	Scophthalmus_maximus
ENSCSAVG00000003023	-	83	59.315	ENSSDUG00000018245	ddx10	60	55.731	Seriola_dumerili
ENSCSAVG00000003023	-	83	59.529	ENSSLDG00000012041	ddx10	59	56.324	Seriola_lalandi_dorsalis
ENSCSAVG00000003023	-	89	55.906	ENSSARG00000004103	DDX10	52	61.111	Sorex_araneus
ENSCSAVG00000003023	-	92	54.080	ENSSPUG00000017612	DDX10	64	53.700	Sphenodon_punctatus
ENSCSAVG00000003023	-	90	56.093	ENSSPAG00000015548	ddx10	82	55.929	Stegastes_partitus
ENSCSAVG00000003023	-	81	60.352	ENSTGUG00000012605	DDX10	56	60.754	Taeniopygia_guttata
ENSCSAVG00000003023	-	82	58.134	ENSTRUG00000010881	ddx10	56	56.632	Takifugu_rubripes
ENSCSAVG00000003023	-	90	54.111	ENSTNIG00000010477	ddx10	56	58.913	Tetraodon_nigroviridis
ENSCSAVG00000003023	-	81	50.552	ENSTBEG00000006321	DDX10	56	50.552	Tupaia_belangeri
ENSCSAVG00000003023	-	89	46.562	ENSTTRG00000006068	DDX10	52	50.110	Tursiops_truncatus
ENSCSAVG00000003023	-	86	55.781	ENSUAMG00000014176	DDX10	87	60.829	Ursus_americanus
ENSCSAVG00000003023	-	81	60.927	ENSUMAG00000007300	DDX10	55	60.927	Ursus_maritimus
ENSCSAVG00000003023	-	80	60.714	ENSVPAG00000010185	DDX10	56	60.714	Vicugna_pacos
ENSCSAVG00000003023	-	89	56.250	ENSVVUG00000015484	DDX10	55	61.148	Vulpes_vulpes
ENSCSAVG00000003023	-	90	58.221	ENSXETG00000014458	ddx10	78	57.009	Xenopus_tropicalis
ENSCSAVG00000003023	-	98	51.318	ENSXCOG00000003080	ddx10	61	57.203	Xiphophorus_couchianus
ENSCSAVG00000003023	-	99	51.049	ENSXMAG00000016515	ddx10	59	57.083	Xiphophorus_maculatus