EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 8267 bases
Position: chrreftig_1:602301-610567
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005071	DEAD	PF00270.29	7.3e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005142	-	2460	-	ENSCSAVP00000005071	713 (aa)	-	H2YIC2

Gene Model

Click here to download ENSCSAVG00000003028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003028	-	61	44.118	ENSCSAVG00000004895	-	66	44.118
ENSCSAVG00000003028	-	54	38.710	ENSCSAVG00000009920	-	90	38.710
ENSCSAVG00000003028	-	57	50.000	ENSCSAVG00000000522	-	79	50.000
ENSCSAVG00000003028	-	54	46.774	ENSCSAVG00000011566	-	68	46.774
ENSCSAVG00000003028	-	57	50.000	ENSCSAVG00000011266	-	73	50.000
ENSCSAVG00000003028	-	55	47.273	ENSCSAVG00000008916	-	100	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003028	-	99	60.440	ENSG00000079785	DDX1	98	60.302	Homo_sapiens
ENSCSAVG00000003028	-	99	61.728	ENSAPOG00000003166	ddx1	99	61.728	Acanthochromis_polyacanthus
ENSCSAVG00000003028	-	99	59.863	ENSAMEG00000001071	DDX1	98	60.000	Ailuropoda_melanoleuca
ENSCSAVG00000003028	-	87	60.125	ENSACIG00000017422	ddx1	97	60.748	Amphilophus_citrinellus
ENSCSAVG00000003028	-	88	61.585	ENSAOCG00000015436	ddx1	94	63.125	Amphiprion_ocellaris
ENSCSAVG00000003028	-	99	61.951	ENSAPEG00000007699	ddx1	99	61.951	Amphiprion_percula
ENSCSAVG00000003028	-	94	62.771	ENSATEG00000003965	ddx1	96	63.135	Anabas_testudineus
ENSCSAVG00000003028	-	99	61.454	ENSAPLG00000011093	DDX1	98	61.454	Anas_platyrhynchos
ENSCSAVG00000003028	-	94	60.606	ENSACAG00000011036	DDX1	98	60.958	Anolis_carolinensis
ENSCSAVG00000003028	-	99	60.165	ENSANAG00000037912	DDX1	98	60.027	Aotus_nancymaae
ENSCSAVG00000003028	-	99	61.813	ENSACLG00000008850	ddx1	97	61.838	Astatotilapia_calliptera
ENSCSAVG00000003028	-	99	60.852	ENSAMXG00000002100	ddx1	98	60.852	Astyanax_mexicanus
ENSCSAVG00000003028	-	99	60.302	ENSBTAG00000009906	DDX1	98	60.302	Bos_taurus
ENSCSAVG00000003028	-	99	42.141	WBGene00021938	Y55F3BR.1	99	42.141	Caenorhabditis_elegans
ENSCSAVG00000003028	-	99	60.165	ENSCJAG00000007076	DDX1	98	60.027	Callithrix_jacchus
ENSCSAVG00000003028	-	99	59.890	ENSCAFG00000003686	DDX1	98	59.890	Canis_familiaris
ENSCSAVG00000003028	-	99	59.890	ENSCAFG00020026083	DDX1	98	59.890	Canis_lupus_dingo
ENSCSAVG00000003028	-	99	60.302	ENSCHIG00000011046	DDX1	98	60.165	Capra_hircus
ENSCSAVG00000003028	-	99	60.302	ENSTSYG00000002477	-	98	60.302	Carlito_syrichta
ENSCSAVG00000003028	-	97	45.531	ENSTSYG00000037396	-	96	45.339	Carlito_syrichta
ENSCSAVG00000003028	-	85	48.819	ENSCAPG00000008906	-	91	48.661	Cavia_aperea
ENSCSAVG00000003028	-	70	59.800	ENSCPOG00000032467	-	99	60.000	Cavia_porcellus
ENSCSAVG00000003028	-	85	60.731	ENSCPOG00000009816	-	92	60.572	Cavia_porcellus
ENSCSAVG00000003028	-	99	60.027	ENSCCAG00000030085	DDX1	98	59.890	Cebus_capucinus
ENSCSAVG00000003028	-	99	60.577	ENSCATG00000033924	DDX1	98	60.440	Cercocebus_atys
ENSCSAVG00000003028	-	99	60.027	ENSCLAG00000005434	DDX1	98	60.027	Chinchilla_lanigera
ENSCSAVG00000003028	-	99	60.577	ENSCSAG00000007883	DDX1	98	60.440	Chlorocebus_sabaeus
ENSCSAVG00000003028	-	68	61.165	ENSCHOG00000002171	DDX1	69	61.165	Choloepus_hoffmanni
ENSCSAVG00000003028	-	99	56.966	ENSCPBG00000013330	DDX1	97	62.233	Chrysemys_picta_bellii
ENSCSAVG00000003028	-	100	76.119	ENSCING00000001176	-	99	76.351	Ciona_intestinalis
ENSCSAVG00000003028	-	99	60.989	ENSCANG00000031530	DDX1	98	60.852	Colobus_angolensis_palliatus
ENSCSAVG00000003028	-	99	60.577	ENSCGRG00001013025	Ddx1	98	60.577	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003028	-	99	60.577	ENSCGRG00000000676	Ddx1	98	60.577	Cricetulus_griseus_crigri
ENSCSAVG00000003028	-	99	61.676	ENSCSEG00000002630	ddx1	99	61.676	Cynoglossus_semilaevis
ENSCSAVG00000003028	-	99	61.951	ENSCVAG00000020927	ddx1	99	61.951	Cyprinodon_variegatus
ENSCSAVG00000003028	-	99	60.219	ENSDARG00000032117	ddx1	99	60.219	Danio_rerio
ENSCSAVG00000003028	-	99	60.577	ENSDNOG00000006905	DDX1	98	60.440	Dasypus_novemcinctus
ENSCSAVG00000003028	-	99	60.302	ENSDORG00000012847	Ddx1	98	60.302	Dipodomys_ordii
ENSCSAVG00000003028	-	99	54.545	FBgn0015075	Ddx1	99	55.021	Drosophila_melanogaster
ENSCSAVG00000003028	-	99	54.670	ENSETEG00000014259	DDX1	98	54.670	Echinops_telfairi
ENSCSAVG00000003028	-	59	63.087	ENSEBUG00000009800	-	94	62.864	Eptatretus_burgeri
ENSCSAVG00000003028	-	99	60.165	ENSEASG00005009335	DDX1	90	60.165	Equus_asinus_asinus
ENSCSAVG00000003028	-	93	59.624	ENSECAG00000016396	DDX1	98	59.768	Equus_caballus
ENSCSAVG00000003028	-	87	59.231	ENSEEUG00000001606	DDX1	88	59.231	Erinaceus_europaeus
ENSCSAVG00000003028	-	99	60.082	ENSELUG00000006743	ddx1	99	60.082	Esox_lucius
ENSCSAVG00000003028	-	99	60.027	ENSFCAG00000004680	DDX1	98	60.165	Felis_catus
ENSCSAVG00000003028	-	99	61.696	ENSFALG00000008696	DDX1	98	61.728	Ficedula_albicollis
ENSCSAVG00000003028	-	99	59.890	ENSFDAG00000021305	DDX1	98	59.890	Fukomys_damarensis
ENSCSAVG00000003028	-	99	61.813	ENSFHEG00000008444	ddx1	99	61.813	Fundulus_heteroclitus
ENSCSAVG00000003028	-	99	60.685	ENSGMOG00000011300	ddx1	98	60.685	Gadus_morhua
ENSCSAVG00000003028	-	99	60.989	ENSGALG00000016461	DDX1	98	60.989	Gallus_gallus
ENSCSAVG00000003028	-	99	62.088	ENSGAFG00000004706	ddx1	98	62.088	Gambusia_affinis
ENSCSAVG00000003028	-	99	60.714	ENSGACG00000011162	ddx1	98	60.577	Gasterosteus_aculeatus
ENSCSAVG00000003028	-	99	59.890	ENSGAGG00000021020	DDX1	98	59.615	Gopherus_agassizii
ENSCSAVG00000003028	-	99	60.440	ENSGGOG00000012482	DDX1	98	60.302	Gorilla_gorilla
ENSCSAVG00000003028	-	99	61.813	ENSHBUG00000014069	ddx1	98	61.813	Haplochromis_burtoni
ENSCSAVG00000003028	-	99	59.890	ENSHGLG00000000801	DDX1	98	59.890	Heterocephalus_glaber_female
ENSCSAVG00000003028	-	99	59.890	ENSHGLG00100000711	DDX1	99	59.890	Heterocephalus_glaber_male
ENSCSAVG00000003028	-	99	62.192	ENSHCOG00000011492	ddx1	94	62.192	Hippocampus_comes
ENSCSAVG00000003028	-	99	60.274	ENSIPUG00000003494	ddx1	98	60.274	Ictalurus_punctatus
ENSCSAVG00000003028	-	99	60.440	ENSSTOG00000003977	DDX1	99	60.440	Ictidomys_tridecemlineatus
ENSCSAVG00000003028	-	86	58.658	ENSJJAG00000013315	Ddx1	97	58.658	Jaculus_jaculus
ENSCSAVG00000003028	-	99	61.401	ENSKMAG00000011340	ddx1	98	61.401	Kryptolebias_marmoratus
ENSCSAVG00000003028	-	86	59.126	ENSLBEG00000008692	ddx1	97	58.970	Labrus_bergylta
ENSCSAVG00000003028	-	99	60.302	ENSLACG00000010529	DDX1	98	60.165	Latimeria_chalumnae
ENSCSAVG00000003028	-	99	60.082	ENSLOCG00000016473	ddx1	97	60.082	Lepisosteus_oculatus
ENSCSAVG00000003028	-	99	60.714	ENSLAFG00000002213	DDX1	98	60.714	Loxodonta_africana
ENSCSAVG00000003028	-	99	60.577	ENSMFAG00000033987	DDX1	98	60.440	Macaca_fascicularis
ENSCSAVG00000003028	-	99	60.577	ENSMMUG00000023437	DDX1	98	60.440	Macaca_mulatta
ENSCSAVG00000003028	-	99	60.577	ENSMNEG00000029189	DDX1	98	60.440	Macaca_nemestrina
ENSCSAVG00000003028	-	99	60.577	ENSMLEG00000030787	DDX1	98	60.440	Mandrillus_leucophaeus
ENSCSAVG00000003028	-	99	61.951	ENSMAMG00000015916	ddx1	98	61.951	Mastacembelus_armatus
ENSCSAVG00000003028	-	99	61.813	ENSMZEG00005015207	ddx1	97	61.838	Maylandia_zebra
ENSCSAVG00000003028	-	99	58.711	ENSMGAG00000014025	DDX1	99	58.711	Meleagris_gallopavo
ENSCSAVG00000003028	-	65	77.083	ENSMAUG00000016156	Ddx1	96	75.510	Mesocricetus_auratus
ENSCSAVG00000003028	-	99	60.165	ENSMICG00000001023	DDX1	98	60.165	Microcebus_murinus
ENSCSAVG00000003028	-	99	60.302	ENSMOCG00000000257	Ddx1	98	60.302	Microtus_ochrogaster
ENSCSAVG00000003028	-	87	61.526	ENSMMOG00000015397	ddx1	97	61.371	Mola_mola
ENSCSAVG00000003028	-	99	60.165	ENSMODG00000010275	DDX1	98	60.165	Monodelphis_domestica
ENSCSAVG00000003028	-	99	62.225	ENSMALG00000016409	ddx1	98	62.088	Monopterus_albus
ENSCSAVG00000003028	-	99	60.440	MGP_CAROLIEiJ_G0017622	Ddx1	98	60.440	Mus_caroli
ENSCSAVG00000003028	-	99	60.302	ENSMUSG00000037149	Ddx1	100	59.585	Mus_musculus
ENSCSAVG00000003028	-	99	60.440	MGP_PahariEiJ_G0029378	Ddx1	98	60.440	Mus_pahari
ENSCSAVG00000003028	-	99	60.302	MGP_SPRETEiJ_G0018464	Ddx1	98	60.440	Mus_spretus
ENSCSAVG00000003028	-	99	59.890	ENSMPUG00000013606	DDX1	98	59.890	Mustela_putorius_furo
ENSCSAVG00000003028	-	99	60.577	ENSMLUG00000003027	DDX1	96	60.577	Myotis_lucifugus
ENSCSAVG00000003028	-	99	60.577	ENSNGAG00000015783	Ddx1	99	60.440	Nannospalax_galili
ENSCSAVG00000003028	-	77	60.522	ENSNBRG00000020677	ddx1	93	60.522	Neolamprologus_brichardi
ENSCSAVG00000003028	-	99	60.440	ENSNLEG00000014417	DDX1	98	60.302	Nomascus_leucogenys
ENSCSAVG00000003028	-	99	58.791	ENSMEUG00000008254	DDX1	99	58.791	Notamacropus_eugenii
ENSCSAVG00000003028	-	76	50.864	ENSOPRG00000004290	DDX1	77	50.672	Ochotona_princeps
ENSCSAVG00000003028	-	99	59.753	ENSODEG00000000569	DDX1	98	59.753	Octodon_degus
ENSCSAVG00000003028	-	99	62.551	ENSONIG00000000513	ddx1	98	62.551	Oreochromis_niloticus
ENSCSAVG00000003028	-	72	64.504	ENSOANG00000005450	DDX1	94	64.504	Ornithorhynchus_anatinus
ENSCSAVG00000003028	-	99	60.027	ENSOCUG00000007010	DDX1	98	60.027	Oryctolagus_cuniculus
ENSCSAVG00000003028	-	99	61.676	ENSORLG00000016709	ddx1	98	61.538	Oryzias_latipes
ENSCSAVG00000003028	-	99	61.538	ENSORLG00020003290	ddx1	99	61.401	Oryzias_latipes_hni
ENSCSAVG00000003028	-	99	61.401	ENSORLG00015022438	ddx1	99	61.264	Oryzias_latipes_hsok
ENSCSAVG00000003028	-	99	57.459	ENSOMEG00000017620	ddx1	98	57.459	Oryzias_melastigma
ENSCSAVG00000003028	-	99	60.274	ENSOGAG00000008730	DDX1	99	60.274	Otolemur_garnettii
ENSCSAVG00000003028	-	99	60.137	ENSOARG00000016369	DDX1	99	60.000	Ovis_aries
ENSCSAVG00000003028	-	99	60.577	ENSPPAG00000027432	DDX1	98	60.440	Pan_paniscus
ENSCSAVG00000003028	-	99	60.027	ENSPPRG00000020556	DDX1	98	60.165	Panthera_pardus
ENSCSAVG00000003028	-	99	60.165	ENSPTIG00000008267	DDX1	98	60.165	Panthera_tigris_altaica
ENSCSAVG00000003028	-	99	60.577	ENSPTRG00000011670	DDX1	98	60.440	Pan_troglodytes
ENSCSAVG00000003028	-	99	60.577	ENSPANG00000025185	DDX1	98	60.440	Papio_anubis
ENSCSAVG00000003028	-	99	59.890	ENSPKIG00000012466	ddx1	99	59.890	Paramormyrops_kingsleyae
ENSCSAVG00000003028	-	56	59.500	ENSPSIG00000012292	DDX1	99	59.500	Pelodiscus_sinensis
ENSCSAVG00000003028	-	99	60.380	ENSPMGG00000000782	ddx1	98	60.380	Periophthalmus_magnuspinnatus
ENSCSAVG00000003028	-	99	60.440	ENSPEMG00000016389	Ddx1	98	60.440	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003028	-	99	61.119	ENSPMAG00000009118	-	99	60.982	Petromyzon_marinus
ENSCSAVG00000003028	-	99	60.577	ENSPCIG00000010941	DDX1	98	60.577	Phascolarctos_cinereus
ENSCSAVG00000003028	-	85	61.356	ENSPFOG00000006873	-	98	61.356	Poecilia_formosa
ENSCSAVG00000003028	-	99	61.813	ENSPFOG00000011921	ddx1	98	61.813	Poecilia_formosa
ENSCSAVG00000003028	-	99	61.538	ENSPLAG00000005939	ddx1	98	61.538	Poecilia_latipinna
ENSCSAVG00000003028	-	99	61.951	ENSPMEG00000011140	ddx1	98	61.951	Poecilia_mexicana
ENSCSAVG00000003028	-	99	61.676	ENSPREG00000011751	ddx1	98	61.676	Poecilia_reticulata
ENSCSAVG00000003028	-	99	60.440	ENSPPYG00000012638	DDX1	98	60.302	Pongo_abelii
ENSCSAVG00000003028	-	99	50.000	ENSPCAG00000001491	DDX1	98	49.863	Procavia_capensis
ENSCSAVG00000003028	-	99	59.066	ENSPCOG00000028185	DDX1	98	59.066	Propithecus_coquereli
ENSCSAVG00000003028	-	99	60.027	ENSPVAG00000013618	DDX1	98	59.890	Pteropus_vampyrus
ENSCSAVG00000003028	-	99	61.813	ENSPNYG00000013839	ddx1	98	61.813	Pundamilia_nyererei
ENSCSAVG00000003028	-	86	60.062	ENSPNAG00000017033	ddx1	95	60.062	Pygocentrus_nattereri
ENSCSAVG00000003028	-	99	60.440	ENSRNOG00000006652	Ddx1	98	60.440	Rattus_norvegicus
ENSCSAVG00000003028	-	99	61.080	ENSRBIG00000041664	DDX1	97	62.684	Rhinopithecus_bieti
ENSCSAVG00000003028	-	99	60.577	ENSRROG00000031167	DDX1	98	60.440	Rhinopithecus_roxellana
ENSCSAVG00000003028	-	99	60.165	ENSSBOG00000027577	DDX1	98	60.027	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003028	-	99	57.024	ENSSHAG00000009363	DDX1	98	57.024	Sarcophilus_harrisii
ENSCSAVG00000003028	-	99	60.519	ENSSFOG00015014476	ddx1	98	60.519	Scleropages_formosus
ENSCSAVG00000003028	-	99	61.951	ENSSMAG00000010094	ddx1	98	61.951	Scophthalmus_maximus
ENSCSAVG00000003028	-	99	62.225	ENSSDUG00000012334	ddx1	98	62.225	Seriola_dumerili
ENSCSAVG00000003028	-	99	61.676	ENSSLDG00000025345	ddx1	98	61.676	Seriola_lalandi_dorsalis
ENSCSAVG00000003028	-	89	60.976	ENSSARG00000004536	DDX1	89	60.976	Sorex_araneus
ENSCSAVG00000003028	-	99	60.165	ENSSPUG00000018835	DDX1	98	60.027	Sphenodon_punctatus
ENSCSAVG00000003028	-	99	58.726	ENSSPAG00000023554	ddx1	98	58.726	Stegastes_partitus
ENSCSAVG00000003028	-	99	60.027	ENSSSCG00000008619	DDX1	98	60.027	Sus_scrofa
ENSCSAVG00000003028	-	99	61.676	ENSTGUG00000013096	DDX1	98	61.676	Taeniopygia_guttata
ENSCSAVG00000003028	-	99	61.401	ENSTRUG00000015765	ddx1	98	61.401	Takifugu_rubripes
ENSCSAVG00000003028	-	99	61.433	ENSTNIG00000016309	ddx1	98	61.433	Tetraodon_nigroviridis
ENSCSAVG00000003028	-	99	57.692	ENSTBEG00000008454	DDX1	98	57.692	Tupaia_belangeri
ENSCSAVG00000003028	-	99	59.835	ENSTTRG00000005081	DDX1	98	59.835	Tursiops_truncatus
ENSCSAVG00000003028	-	61	59.361	ENSUAMG00000017375	DDX1	84	59.633	Ursus_americanus
ENSCSAVG00000003028	-	99	60.027	ENSUMAG00000023450	DDX1	99	60.027	Ursus_maritimus
ENSCSAVG00000003028	-	83	62.927	ENSVPAG00000007764	DDX1	83	62.927	Vicugna_pacos
ENSCSAVG00000003028	-	99	59.890	ENSVVUG00000013085	DDX1	94	59.890	Vulpes_vulpes
ENSCSAVG00000003028	-	99	60.989	ENSXETG00000017825	ddx1	98	60.989	Xenopus_tropicalis
ENSCSAVG00000003028	-	99	60.490	ENSXCOG00000007082	ddx1	98	60.490	Xiphophorus_couchianus
ENSCSAVG00000003028	-	99	62.088	ENSXMAG00000004555	ddx1	98	62.088	Xiphophorus_maculatus