EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003039 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
10131 bases
Position
chrreftig_26:168131-178261
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005088eRF1_2PF03464.151e-4611
ENSCSAVP00000005084eRF1_2PF03464.151.1e-4611
ENSCSAVP00000005085eRF1_2PF03464.155.8e-4611
ENSCSAVP00000005087eRF1_2PF03464.156.7e-4611
ENSCSAVP00000005086eRF1_2PF03464.156.8e-4611
ENSCSAVP00000005089eRF1_2PF03464.155.2e-4111
ENSCSAVP00000005086eRF1_3PF03465.152.6e-3811
ENSCSAVP00000005084eRF1_3PF03465.152.9e-3811
ENSCSAVP00000005087eRF1_3PF03465.154e-3811
ENSCSAVP00000005088eRF1_3PF03465.152.9e-3711
ENSCSAVP00000005085eRF1_3PF03465.155e-3711
ENSCSAVP00000005089eRF1_3PF03465.158.5e-3511
ENSCSAVP00000005089eRF1_1PF03463.152.3e-2011
ENSCSAVP00000005084eRF1_1PF03463.152.3e-2011
ENSCSAVP00000005087eRF1_1PF03463.152.6e-2011
ENSCSAVP00000005086eRF1_1PF03463.152.7e-2011
ENSCSAVP00000005085eRF1_1PF03463.152.8e-2011
ENSCSAVP00000005088eRF1_1PF03463.152.8e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005155-1724-ENSCSAVP00000005084435 (aa)-H2YID5
ENSCSAVT00000005157-1372-ENSCSAVP00000005086434 (aa)-H2YID7
ENSCSAVT00000005156-1386-ENSCSAVP00000005085439 (aa)-H2YID6
ENSCSAVT00000005159-1558-ENSCSAVP00000005088424 (aa)-H2YID9
ENSCSAVT00000005158-1594-ENSCSAVP00000005087441 (aa)-H2YID8
ENSCSAVT00000005160-1146-ENSCSAVP00000005089382 (aa)-H2YIE0
Gene Model
Click here to download ENSCSAVG00000003039's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003039's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003039-9986.374ENSG00000120705ETF110094.958Homo_sapiens
ENSCSAVG00000003039-9885.349ENSAPOG00000004622etf1a9984.282Acanthochromis_polyacanthus
ENSCSAVG00000003039-9985.450ENSAMEG00000016547ETF19985.450Ailuropoda_melanoleuca
ENSCSAVG00000003039-9786.792ENSACIG00000014875etf1a9985.681Amphilophus_citrinellus
ENSCSAVG00000003039-9885.349ENSAOCG00000015573etf1a9984.282Amphiprion_ocellaris
ENSCSAVG00000003039-9885.349ENSAPEG00000015124etf1a9984.282Amphiprion_percula
ENSCSAVG00000003039-9885.349ENSATEG00000009599etf1a9984.282Anabas_testudineus
ENSCSAVG00000003039-9386.386ENSAPLG00000009740ETF19986.386Anas_platyrhynchos
ENSCSAVG00000003039-9986.143ENSACAG00000015818ETF19986.143Anolis_carolinensis
ENSCSAVG00000003039-9977.829ENSANAG00000014418-9977.829Aotus_nancymaae
ENSCSAVG00000003039-10070.252ENSANAG00000023525-10070.252Aotus_nancymaae
ENSCSAVG00000003039-9986.374ENSANAG00000025638-9694.253Aotus_nancymaae
ENSCSAVG00000003039-9963.279ENSANAG00000021905-9963.279Aotus_nancymaae
ENSCSAVG00000003039-9885.581ENSACLG00000010368etf1a9984.510Astatotilapia_calliptera
ENSCSAVG00000003039-9886.047ENSAMXG00000040685etf1b9984.966Astyanax_mexicanus
ENSCSAVG00000003039-9884.884ENSAMXG00000037774etf1a9983.827Astyanax_mexicanus
ENSCSAVG00000003039-9986.374ENSBTAG00000011415ETF19986.374Bos_taurus
ENSCSAVG00000003039-9779.157WBGene00020269erfa-19779.302Caenorhabditis_elegans
ENSCSAVG00000003039-9986.374ENSCJAG00000006776ETF19986.374Callithrix_jacchus
ENSCSAVG00000003039-9986.374ENSCAFG00000015396-9986.374Canis_familiaris
ENSCSAVG00000003039-9986.374ENSCAFG00000001282ETF19986.374Canis_familiaris
ENSCSAVG00000003039-9986.374ENSCAFG00020010400ETF19986.374Canis_lupus_dingo
ENSCSAVG00000003039-9986.374ENSCHIG00000009685-9986.374Capra_hircus
ENSCSAVG00000003039-9663.484ENSTSYG00000036069-9467.363Carlito_syrichta
ENSCSAVG00000003039-9986.374ENSTSYG00000011754ETF19294.253Carlito_syrichta
ENSCSAVG00000003039-9562.350ENSCAPG00000009035ETF110062.350Cavia_aperea
ENSCSAVG00000003039-9986.374ENSCPOG00000002361ETF19986.374Cavia_porcellus
ENSCSAVG00000003039-9957.275ENSCCAG00000024925-9957.275Cebus_capucinus
ENSCSAVG00000003039-9386.386ENSCCAG00000035658-9986.250Cebus_capucinus
ENSCSAVG00000003039-10068.421ENSCATG00000030269-9281.111Cercocebus_atys
ENSCSAVG00000003039-9386.386ENSCATG00000031628-9294.253Cercocebus_atys
ENSCSAVG00000003039-8460.490ENSCATG00000029533-9560.490Cercocebus_atys
ENSCSAVG00000003039-9986.374ENSCLAG00000007158-9986.374Chinchilla_lanigera
ENSCSAVG00000003039-10059.640ENSCLAG00000001221-9761.593Chinchilla_lanigera
ENSCSAVG00000003039-64100.000ENSCHOG00000007697ETF163100.000Choloepus_hoffmanni
ENSCSAVG00000003039-10086.041ENSCPBG00000021239ETF19986.374Chrysemys_picta_bellii
ENSCSAVG00000003039-10099.080ENSCING00000002292-10099.080Ciona_intestinalis
ENSCSAVG00000003039-7069.637ENSCANG00000035977-8469.637Colobus_angolensis_palliatus
ENSCSAVG00000003039-8867.885ENSCANG00000037950-9667.885Colobus_angolensis_palliatus
ENSCSAVG00000003039-10065.750ENSCANG00000043675-9065.217Colobus_angolensis_palliatus
ENSCSAVG00000003039-10077.444ENSCGRG00001007046Etf110074.371Cricetulus_griseus_chok1gshd
ENSCSAVG00000003039-9386.139ENSCGRG00000008154Etf19986.139Cricetulus_griseus_crigri
ENSCSAVG00000003039-9885.349ENSCSEG00000006451etf1a9984.282Cynoglossus_semilaevis
ENSCSAVG00000003039-9885.814ENSCVAG00000011438etf1a9984.738Cyprinodon_variegatus
ENSCSAVG00000003039-9886.047ENSDARG00000043976etf1b9985.388Danio_rerio
ENSCSAVG00000003039-9378.436ENSDARG00000105210etf1a10078.436Danio_rerio
ENSCSAVG00000003039-9986.374ENSDNOG00000010830ETF19986.374Dasypus_novemcinctus
ENSCSAVG00000003039-9986.374ENSDORG00000006134Etf19986.374Dipodomys_ordii
ENSCSAVG00000003039-10082.877FBgn0036974eRF110083.066Drosophila_melanogaster
ENSCSAVG00000003039-9975.751ENSETEG00000007362ETF19975.751Echinops_telfairi
ENSCSAVG00000003039-6764.179ENSEBUG00000014212-5864.621Eptatretus_burgeri
ENSCSAVG00000003039-9261.823ENSEBUG00000012821-10061.369Eptatretus_burgeri
ENSCSAVG00000003039-9986.374ENSEASG00005020814ETF19294.253Equus_asinus_asinus
ENSCSAVG00000003039-9986.374ENSECAG00000013041ETF19294.253Equus_caballus
ENSCSAVG00000003039-7479.894ENSEEUG00000012422-7479.894Erinaceus_europaeus
ENSCSAVG00000003039-9983.710ENSELUG00000013149etf1b9983.710Esox_lucius
ENSCSAVG00000003039-9885.116ENSELUG00000018668etf1a9984.055Esox_lucius
ENSCSAVG00000003039-9986.374ENSFCAG00000030132ETF19986.374Felis_catus
ENSCSAVG00000003039-9581.671ENSFALG00000003225ETF19981.671Ficedula_albicollis
ENSCSAVG00000003039-9386.386ENSFDAG00000016056ETF19984.337Fukomys_damarensis
ENSCSAVG00000003039-9984.510ENSFHEG00000002090etf1a9984.510Fundulus_heteroclitus
ENSCSAVG00000003039-9884.722ENSGMOG00000006876etf1a9983.900Gadus_morhua
ENSCSAVG00000003039-9986.374ENSGALG00000002262ETF19986.374Gallus_gallus
ENSCSAVG00000003039-9885.814ENSGAFG00000015447etf1a9984.738Gambusia_affinis
ENSCSAVG00000003039-9885.581ENSGACG00000017928etf1a9984.527Gasterosteus_aculeatus
ENSCSAVG00000003039-9986.374ENSGAGG00000022294ETF19986.374Gopherus_agassizii
ENSCSAVG00000003039-9968.822ENSGGOG00000040995-9968.822Gorilla_gorilla
ENSCSAVG00000003039-5881.423ENSGGOG00000000657-9481.423Gorilla_gorilla
ENSCSAVG00000003039-9885.581ENSHBUG00000009074etf1a9984.510Haplochromis_burtoni
ENSCSAVG00000003039-9977.389ENSHGLG00000004075-9978.111Heterocephalus_glaber_female
ENSCSAVG00000003039-9865.654ENSHGLG00000014695-9765.654Heterocephalus_glaber_female
ENSCSAVG00000003039-9066.474ENSHGLG00000015270-9979.221Heterocephalus_glaber_female
ENSCSAVG00000003039-9969.655ENSHGLG00000003688-9969.655Heterocephalus_glaber_female
ENSCSAVG00000003039-9970.534ENSHGLG00100014362-9970.534Heterocephalus_glaber_male
ENSCSAVG00000003039-9863.403ENSHGLG00100012061-9763.403Heterocephalus_glaber_male
ENSCSAVG00000003039-9066.474ENSHGLG00100007609-9979.221Heterocephalus_glaber_male
ENSCSAVG00000003039-9977.622ENSHGLG00100008699-9978.341Heterocephalus_glaber_male
ENSCSAVG00000003039-9985.912ENSHGLG00100015871-9985.912Heterocephalus_glaber_male
ENSCSAVG00000003039-9885.581ENSHCOG00000014543etf1a9984.510Hippocampus_comes
ENSCSAVG00000003039-9984.055ENSIPUG00000008892etf19984.055Ictalurus_punctatus
ENSCSAVG00000003039-9983.599ENSIPUG00000020217etf1b9983.599Ictalurus_punctatus
ENSCSAVG00000003039-9986.374ENSSTOG00000025996ETF19986.374Ictidomys_tridecemlineatus
ENSCSAVG00000003039-9984.296ENSJJAG00000017795Etf19984.296Jaculus_jaculus
ENSCSAVG00000003039-9885.814ENSKMAG00000009423etf1a9984.738Kryptolebias_marmoratus
ENSCSAVG00000003039-9885.581ENSLBEG00000001321etf1a9984.510Labrus_bergylta
ENSCSAVG00000003039-9787.500ENSLACG00000004339ETF19986.605Latimeria_chalumnae
ENSCSAVG00000003039-9787.264ENSLOCG00000009715etf1b9886.374Lepisosteus_oculatus
ENSCSAVG00000003039-9986.374ENSLAFG00000016509ETF19986.374Loxodonta_africana
ENSCSAVG00000003039-9386.386ENSMFAG00000039900ETF19294.253Macaca_fascicularis
ENSCSAVG00000003039-10068.879ENSMMUG00000044828-10068.879Macaca_mulatta
ENSCSAVG00000003039-9986.374ENSMMUG00000005871ETF19986.374Macaca_mulatta
ENSCSAVG00000003039-8859.580ENSMNEG00000039922-9760.477Macaca_nemestrina
ENSCSAVG00000003039-10063.844ENSMNEG00000040590-10063.844Macaca_nemestrina
ENSCSAVG00000003039-9386.386ENSMNEG00000033524-9986.250Macaca_nemestrina
ENSCSAVG00000003039-10069.336ENSMLEG00000040356-10069.336Mandrillus_leucophaeus
ENSCSAVG00000003039-9386.386ENSMLEG00000030877-9294.253Mandrillus_leucophaeus
ENSCSAVG00000003039-9885.349ENSMAMG00000006188etf1a9984.282Mastacembelus_armatus
ENSCSAVG00000003039-9885.581ENSMZEG00005000459etf1a9984.510Maylandia_zebra
ENSCSAVG00000003039-9883.178ENSMGAG00000001474ETF19883.178Meleagris_gallopavo
ENSCSAVG00000003039-9986.374ENSMAUG00000013832Etf19986.374Mesocricetus_auratus
ENSCSAVG00000003039-9986.374ENSMICG00000012999ETF19294.253Microcebus_murinus
ENSCSAVG00000003039-9986.374ENSMOCG00000016845Etf19986.374Microtus_ochrogaster
ENSCSAVG00000003039-9886.632ENSMMOG00000002824etf1a9685.642Mola_mola
ENSCSAVG00000003039-9986.374ENSMODG00000012115ETF19986.374Monodelphis_domestica
ENSCSAVG00000003039-9885.349ENSMALG00000001409etf1a9984.282Monopterus_albus
ENSCSAVG00000003039-9986.374MGP_CAROLIEiJ_G0022102Etf19986.374Mus_caroli
ENSCSAVG00000003039-9986.374ENSMUSG00000024360Etf19986.374Mus_musculus
ENSCSAVG00000003039-9986.374MGP_PahariEiJ_G0018836Etf19986.374Mus_pahari
ENSCSAVG00000003039-9986.374MGP_SPRETEiJ_G0023014Etf19986.374Mus_spretus
ENSCSAVG00000003039-9986.374ENSMPUG00000009338ETF19986.374Mustela_putorius_furo
ENSCSAVG00000003039-9986.605ENSMLUG00000016844ETF19986.605Myotis_lucifugus
ENSCSAVG00000003039-9986.374ENSNGAG00000006779Etf19986.374Nannospalax_galili
ENSCSAVG00000003039-9786.792ENSNBRG00000008918etf1a9985.681Neolamprologus_brichardi
ENSCSAVG00000003039-9381.436ENSNLEG00000008972ETF19981.250Nomascus_leucogenys
ENSCSAVG00000003039-9986.143ENSMEUG00000012138ETF19986.143Notamacropus_eugenii
ENSCSAVG00000003039-9986.374ENSOPRG00000016434ETF19986.374Ochotona_princeps
ENSCSAVG00000003039-9986.374ENSODEG00000003605ETF19986.374Octodon_degus
ENSCSAVG00000003039-9885.581ENSONIG00000004951etf1a9984.510Oreochromis_niloticus
ENSCSAVG00000003039-9977.622ENSOCUG00000027367-9877.622Oryctolagus_cuniculus
ENSCSAVG00000003039-9986.374ENSOCUG00000006650ETF19986.374Oryctolagus_cuniculus
ENSCSAVG00000003039-9885.581ENSORLG00000004308etf1a9984.510Oryzias_latipes
ENSCSAVG00000003039-9885.581ENSORLG00020014360etf1a9984.510Oryzias_latipes_hni
ENSCSAVG00000003039-9885.581ENSORLG00015021577etf1a9984.510Oryzias_latipes_hsok
ENSCSAVG00000003039-9786.792ENSOMEG00000003972etf1a9985.681Oryzias_melastigma
ENSCSAVG00000003039-9374.877ENSOGAG00000015866ETF19974.877Otolemur_garnettii
ENSCSAVG00000003039-5087.500ENSOARG00000016500-7586.139Ovis_aries
ENSCSAVG00000003039-9984.296ENSOARG00000004435-9984.296Ovis_aries
ENSCSAVG00000003039-9386.386ENSPPAG00000040714-9294.253Pan_paniscus
ENSCSAVG00000003039-9970.862ENSPPAG00000040284-9870.862Pan_paniscus
ENSCSAVG00000003039-9986.374ENSPPRG00000012410ETF19986.374Panthera_pardus
ENSCSAVG00000003039-9786.698ENSPTIG00000014892ETF19986.698Panthera_tigris_altaica
ENSCSAVG00000003039-9969.231ENSPTRG00000049560-9869.231Pan_troglodytes
ENSCSAVG00000003039-9969.231ENSPTRG00000045744-9869.231Pan_troglodytes
ENSCSAVG00000003039-8459.140ENSPTRG00000046166-9859.140Pan_troglodytes
ENSCSAVG00000003039-9386.386ENSPTRG00000017289ETF19294.253Pan_troglodytes
ENSCSAVG00000003039-10069.336ENSPANG00000009407-10069.336Papio_anubis
ENSCSAVG00000003039-9986.374ENSPANG00000008616-9294.253Papio_anubis
ENSCSAVG00000003039-9885.581ENSPKIG00000016950-9984.738Paramormyrops_kingsleyae
ENSCSAVG00000003039-9885.814ENSPKIG00000003947ETF19984.966Paramormyrops_kingsleyae
ENSCSAVG00000003039-9386.386ENSPSIG00000012406ETF19986.250Pelodiscus_sinensis
ENSCSAVG00000003039-8686.364ENSPMGG00000021758etf1a9985.379Periophthalmus_magnuspinnatus
ENSCSAVG00000003039-9986.374ENSPEMG00000000151Etf19986.374Peromyscus_maniculatus_bairdii
ENSCSAVG00000003039-10083.827ENSPMAG00000006286-10083.827Petromyzon_marinus
ENSCSAVG00000003039-9986.374ENSPCIG00000015966ETF19986.374Phascolarctos_cinereus
ENSCSAVG00000003039-9885.814ENSPFOG00000000902etf1a9984.738Poecilia_formosa
ENSCSAVG00000003039-9885.814ENSPLAG00000012676etf1a9984.738Poecilia_latipinna
ENSCSAVG00000003039-9885.814ENSPMEG00000005567etf1a9984.738Poecilia_mexicana
ENSCSAVG00000003039-9787.028ENSPREG00000001855etf1a9985.912Poecilia_reticulata
ENSCSAVG00000003039-9986.374ENSPPYG00000015829ETF19986.374Pongo_abelii
ENSCSAVG00000003039-9977.136ENSPCAG00000010722ETF19977.136Procavia_capensis
ENSCSAVG00000003039-9986.374ENSPCOG00000019476ETF19294.253Propithecus_coquereli
ENSCSAVG00000003039-9986.374ENSPVAG00000008352ETF19986.374Pteropus_vampyrus
ENSCSAVG00000003039-9885.581ENSPNYG00000001784etf1a9984.510Pundamilia_nyererei
ENSCSAVG00000003039-9885.581ENSPNAG00000022201etf1b9984.510Pygocentrus_nattereri
ENSCSAVG00000003039-9884.884ENSPNAG00000011377etf1a9983.827Pygocentrus_nattereri
ENSCSAVG00000003039-9986.374ENSRNOG00000019450Etf19986.374Rattus_norvegicus
ENSCSAVG00000003039-8885.640ENSRBIG00000020512-9985.640Rhinopithecus_bieti
ENSCSAVG00000003039-10068.650ENSRBIG00000038145-9168.650Rhinopithecus_bieti
ENSCSAVG00000003039-10059.497ENSRBIG00000043448-10059.497Rhinopithecus_bieti
ENSCSAVG00000003039-9986.374ENSRROG00000043321ETF19986.374Rhinopithecus_roxellana
ENSCSAVG00000003039-10068.650ENSRROG00000032696-9168.650Rhinopithecus_roxellana
ENSCSAVG00000003039-9968.910YBR143CSUP459868.910Saccharomyces_cerevisiae
ENSCSAVG00000003039-9386.386ENSSBOG00000031547ETF19986.250Saimiri_boliviensis_boliviensis
ENSCSAVG00000003039-9385.432ENSSHAG00000012614ETF19986.250Sarcophilus_harrisii
ENSCSAVG00000003039-9885.814ENSSFOG00015006929ETF19985.194Scleropages_formosus
ENSCSAVG00000003039-9885.814ENSSFOG00015004315-9985.194Scleropages_formosus
ENSCSAVG00000003039-9885.116ENSSMAG00000001690etf1a9984.055Scophthalmus_maximus
ENSCSAVG00000003039-9885.349ENSSDUG00000022965etf1a9984.282Seriola_dumerili
ENSCSAVG00000003039-9885.349ENSSLDG00000001845etf1a9984.282Seriola_lalandi_dorsalis
ENSCSAVG00000003039-8495.294ENSSARG00000008318ETF18493.333Sorex_araneus
ENSCSAVG00000003039-9386.139ENSSPUG00000000174ETF19986.139Sphenodon_punctatus
ENSCSAVG00000003039-9885.349ENSSPAG00000016855etf1a9984.282Stegastes_partitus
ENSCSAVG00000003039-9986.374ENSSSCG00000014337ETF19986.374Sus_scrofa
ENSCSAVG00000003039-9386.386ENSTGUG00000014736ETF19986.386Taeniopygia_guttata
ENSCSAVG00000003039-9885.814ENSTRUG00000001004etf1a9986.811Takifugu_rubripes
ENSCSAVG00000003039-9786.247ENSTNIG00000003433etf1a9985.388Tetraodon_nigroviridis
ENSCSAVG00000003039-9984.988ENSTBEG00000015066ETF19984.988Tupaia_belangeri
ENSCSAVG00000003039-9980.184ENSTTRG00000005507ETF19980.184Tursiops_truncatus
ENSCSAVG00000003039-9986.374ENSUMAG00000016136ETF19986.374Ursus_maritimus
ENSCSAVG00000003039-9386.386ENSVPAG00000006331ETF19986.386Vicugna_pacos
ENSCSAVG00000003039-9986.374ENSVVUG00000018226ETF19986.374Vulpes_vulpes
ENSCSAVG00000003039-9985.484ENSXETG00000011876etf19985.484Xenopus_tropicalis
ENSCSAVG00000003039-9787.028ENSXCOG00000002561etf1a9985.912Xiphophorus_couchianus
ENSCSAVG00000003039-9885.814ENSXMAG00000004958etf1a9984.738Xiphophorus_maculatus

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