EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003057 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8502 bases
Position: chrreftig_7:1380249-1388750
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005119	eIF2A	PF08662.11	2e-69	1	1
ENSCSAVP00000005118	eIF2A	PF08662.11	7.6e-69	1	1
ENSCSAVP00000005117	eIF2A	PF08662.11	9.8e-69	1	1
ENSCSAVP00000005116	eIF2A	PF08662.11	1.1e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005188	-	1608	-	ENSCSAVP00000005117	511 (aa)	-	H2YIG8
ENSCSAVT00000005189	-	1832	-	ENSCSAVP00000005118	548 (aa)	-	H2YIG9
ENSCSAVT00000005187	-	1563	-	ENSCSAVP00000005116	489 (aa)	-	H2YIG7
ENSCSAVT00000005190	-	1757	-	ENSCSAVP00000005119	563 (aa)	-	H2YIH0

Gene Model

Click here to download ENSCSAVG00000003057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003057	-	98	44.340	ENSG00000144895	EIF2A	99	46.789	Homo_sapiens
ENSCSAVG00000003057	-	99	42.478	ENSAPOG00000008520	eif2a	99	39.767	Acanthochromis_polyacanthus
ENSCSAVG00000003057	-	98	44.340	ENSAMEG00000010505	-	98	42.954	Ailuropoda_melanoleuca
ENSCSAVG00000003057	-	96	42.486	ENSACIG00000024095	eif2a	91	39.572	Amphilophus_citrinellus
ENSCSAVG00000003057	-	99	43.345	ENSAOCG00000006919	eif2a	99	40.995	Amphiprion_ocellaris
ENSCSAVG00000003057	-	99	43.345	ENSAPEG00000019145	eif2a	99	41.166	Amphiprion_percula
ENSCSAVG00000003057	-	99	43.964	ENSATEG00000019832	eif2a	99	42.808	Anabas_testudineus
ENSCSAVG00000003057	-	97	45.985	ENSAPLG00000010076	EIF2A	99	44.027	Anas_platyrhynchos
ENSCSAVG00000003057	-	98	43.570	ENSACAG00000007685	EIF2A	99	42.882	Anolis_carolinensis
ENSCSAVG00000003057	-	98	44.340	ENSANAG00000038084	EIF2A	99	43.299	Aotus_nancymaae
ENSCSAVG00000003057	-	99	43.243	ENSACLG00000009872	eif2a	99	41.319	Astatotilapia_calliptera
ENSCSAVG00000003057	-	98	43.545	ENSAMXG00000013924	eif2a	99	41.781	Astyanax_mexicanus
ENSCSAVG00000003057	-	98	43.962	ENSBTAG00000009106	EIF2A	99	42.978	Bos_taurus
ENSCSAVG00000003057	-	99	33.142	WBGene00008480	eif-2A	99	33.002	Caenorhabditis_elegans
ENSCSAVG00000003057	-	98	44.151	ENSCJAG00000001199	EIF2A	99	43.127	Callithrix_jacchus
ENSCSAVG00000003057	-	97	45.109	ENSCAFG00000008407	EIF2A	99	43.316	Canis_familiaris
ENSCSAVG00000003057	-	91	45.491	ENSCAFG00020004502	EIF2A	90	44.597	Canis_lupus_dingo
ENSCSAVG00000003057	-	98	44.677	ENSCHIG00000023786	EIF2A	99	42.978	Capra_hircus
ENSCSAVG00000003057	-	98	44.952	ENSTSYG00000014247	EIF2A	99	43.486	Carlito_syrichta
ENSCSAVG00000003057	-	100	42.527	ENSCPOG00000006568	EIF2A	99	41.581	Cavia_porcellus
ENSCSAVG00000003057	-	98	44.528	ENSCCAG00000032810	-	99	43.471	Cebus_capucinus
ENSCSAVG00000003057	-	98	38.740	ENSCCAG00000026029	-	99	38.501	Cebus_capucinus
ENSCSAVG00000003057	-	98	42.966	ENSCATG00000030017	EIF2A	97	41.969	Cercocebus_atys
ENSCSAVG00000003057	-	100	45.989	ENSCLAG00000002863	EIF2A	99	45.222	Chinchilla_lanigera
ENSCSAVG00000003057	-	98	44.151	ENSCSAG00000011568	EIF2A	99	43.299	Chlorocebus_sabaeus
ENSCSAVG00000003057	-	99	40.794	ENSCHOG00000005256	EIF2A	90	40.794	Choloepus_hoffmanni
ENSCSAVG00000003057	-	98	44.508	ENSCPBG00000014430	EIF2A	99	43.003	Chrysemys_picta_bellii
ENSCSAVG00000003057	-	100	76.182	ENSCING00000002504	-	99	73.494	Ciona_intestinalis
ENSCSAVG00000003057	-	97	43.907	ENSCANG00000037097	EIF2A	99	43.316	Colobus_angolensis_palliatus
ENSCSAVG00000003057	-	97	45.404	ENSCGRG00001016171	Eif2a	99	43.289	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003057	-	97	45.404	ENSCGRG00000009072	Eif2a	99	43.289	Cricetulus_griseus_crigri
ENSCSAVG00000003057	-	97	44.527	ENSCSEG00000006247	eif2a	96	40.117	Cynoglossus_semilaevis
ENSCSAVG00000003057	-	99	42.342	ENSCVAG00000001346	eif2a	99	41.138	Cyprinodon_variegatus
ENSCSAVG00000003057	-	98	43.762	ENSDARG00000101061	eif2a	99	42.685	Danio_rerio
ENSCSAVG00000003057	-	97	45.037	ENSDNOG00000014002	EIF2A	99	43.761	Dasypus_novemcinctus
ENSCSAVG00000003057	-	97	41.408	ENSDORG00000012408	Eif2a	93	43.724	Dipodomys_ordii
ENSCSAVG00000003057	-	99	34.068	FBgn0037135	CG7414	98	33.543	Drosophila_melanogaster
ENSCSAVG00000003057	-	98	41.794	ENSETEG00000020032	EIF2A	97	41.368	Echinops_telfairi
ENSCSAVG00000003057	-	100	38.342	ENSEBUG00000009787	eif2a	99	37.997	Eptatretus_burgeri
ENSCSAVG00000003057	-	97	45.091	ENSEASG00005021392	EIF2A	99	43.316	Equus_asinus_asinus
ENSCSAVG00000003057	-	97	45.091	ENSECAG00000024832	EIF2A	99	43.316	Equus_caballus
ENSCSAVG00000003057	-	98	44.847	ENSEEUG00000011239	EIF2A	95	43.932	Erinaceus_europaeus
ENSCSAVG00000003057	-	99	44.086	ENSELUG00000006270	eif2a	99	42.087	Esox_lucius
ENSCSAVG00000003057	-	98	44.528	ENSFCAG00000011331	EIF2A	97	43.486	Felis_catus
ENSCSAVG00000003057	-	98	43.870	ENSFALG00000005241	EIF2A	99	42.230	Ficedula_albicollis
ENSCSAVG00000003057	-	99	45.617	ENSFDAG00000019484	EIF2A	96	43.707	Fukomys_damarensis
ENSCSAVG00000003057	-	99	44.144	ENSFHEG00000008768	eif2a	92	44.259	Fundulus_heteroclitus
ENSCSAVG00000003057	-	96	43.843	ENSGMOG00000001939	eif2a	100	41.273	Gadus_morhua
ENSCSAVG00000003057	-	98	45.155	ENSGALG00000010401	EIF2A	99	43.836	Gallus_gallus
ENSCSAVG00000003057	-	99	43.315	ENSGAFG00000016886	eif2a	99	42.051	Gambusia_affinis
ENSCSAVG00000003057	-	99	41.591	ENSGACG00000004748	eif2a	99	40.348	Gasterosteus_aculeatus
ENSCSAVG00000003057	-	98	43.536	ENSGAGG00000020541	EIF2A	99	42.687	Gopherus_agassizii
ENSCSAVG00000003057	-	98	44.528	ENSGGOG00000015391	EIF2A	99	43.471	Gorilla_gorilla
ENSCSAVG00000003057	-	99	43.447	ENSHBUG00000017252	eif2a	99	41.319	Haplochromis_burtoni
ENSCSAVG00000003057	-	98	46.098	ENSHGLG00000019241	-	99	44.974	Heterocephalus_glaber_female
ENSCSAVG00000003057	-	94	39.313	ENSHGLG00000002495	-	99	37.613	Heterocephalus_glaber_female
ENSCSAVG00000003057	-	94	39.313	ENSHGLG00100005448	-	99	37.613	Heterocephalus_glaber_male
ENSCSAVG00000003057	-	98	46.098	ENSHGLG00100008925	-	99	44.974	Heterocephalus_glaber_male
ENSCSAVG00000003057	-	99	42.473	ENSHCOG00000006342	eif2a	99	40.000	Hippocampus_comes
ENSCSAVG00000003057	-	98	44.231	ENSIPUG00000013822	eif2a	99	43.056	Ictalurus_punctatus
ENSCSAVG00000003057	-	98	44.551	ENSSTOG00000003374	EIF2A	99	43.932	Ictidomys_tridecemlineatus
ENSCSAVG00000003057	-	98	44.592	ENSJJAG00000011257	Eif2a	99	43.664	Jaculus_jaculus
ENSCSAVG00000003057	-	99	42.986	ENSKMAG00000007156	eif2a	99	40.630	Kryptolebias_marmoratus
ENSCSAVG00000003057	-	98	44.551	ENSLACG00000009147	EIF2A	99	42.784	Latimeria_chalumnae
ENSCSAVG00000003057	-	97	42.000	ENSLOCG00000001831	eif2a	99	39.559	Lepisosteus_oculatus
ENSCSAVG00000003057	-	98	44.867	ENSLAFG00000003767	EIF2A	99	43.643	Loxodonta_africana
ENSCSAVG00000003057	-	98	44.528	ENSMFAG00000045972	EIF2A	99	43.643	Macaca_fascicularis
ENSCSAVG00000003057	-	98	44.528	ENSMMUG00000017696	EIF2A	99	43.643	Macaca_mulatta
ENSCSAVG00000003057	-	98	42.748	ENSMNEG00000034637	EIF2A	99	41.638	Macaca_nemestrina
ENSCSAVG00000003057	-	98	44.528	ENSMLEG00000032824	EIF2A	99	43.643	Mandrillus_leucophaeus
ENSCSAVG00000003057	-	97	43.243	ENSMAMG00000018484	eif2a	99	40.871	Mastacembelus_armatus
ENSCSAVG00000003057	-	99	43.243	ENSMZEG00005001832	eif2a	99	41.319	Maylandia_zebra
ENSCSAVG00000003057	-	98	45.338	ENSMGAG00000010935	EIF2A	98	44.821	Meleagris_gallopavo
ENSCSAVG00000003057	-	97	45.037	ENSMAUG00000017191	Eif2a	99	43.419	Mesocricetus_auratus
ENSCSAVG00000003057	-	98	44.802	ENSMICG00000049004	EIF2A	99	43.824	Microcebus_murinus
ENSCSAVG00000003057	-	94	43.470	ENSMOCG00000017111	Eif2a	95	40.103	Microtus_ochrogaster
ENSCSAVG00000003057	-	98	43.478	ENSMMOG00000009546	eif2a	99	40.000	Mola_mola
ENSCSAVG00000003057	-	98	43.289	ENSMODG00000028858	EIF2A	99	42.640	Monodelphis_domestica
ENSCSAVG00000003057	-	97	43.353	ENSMALG00000018747	eif2a	99	38.624	Monopterus_albus
ENSCSAVG00000003057	-	98	44.636	MGP_CAROLIEiJ_G0025009	Eif2a	99	43.836	Mus_caroli
ENSCSAVG00000003057	-	98	44.636	ENSMUSG00000027810	Eif2a	99	43.836	Mus_musculus
ENSCSAVG00000003057	-	98	44.297	MGP_PahariEiJ_G0026453	Eif2a	99	43.271	Mus_pahari
ENSCSAVG00000003057	-	98	44.636	MGP_SPRETEiJ_G0025949	Eif2a	99	43.836	Mus_spretus
ENSCSAVG00000003057	-	100	44.700	ENSMPUG00000002592	EIF2A	99	43.316	Mustela_putorius_furo
ENSCSAVG00000003057	-	98	44.190	ENSMLUG00000010497	EIF2A	99	42.735	Myotis_lucifugus
ENSCSAVG00000003057	-	97	42.987	ENSNGAG00000007717	Eif2a	99	41.809	Nannospalax_galili
ENSCSAVG00000003057	-	99	43.268	ENSNBRG00000007149	eif2a	96	42.190	Neolamprologus_brichardi
ENSCSAVG00000003057	-	97	43.986	ENSNLEG00000003219	EIF2A	99	42.931	Nomascus_leucogenys
ENSCSAVG00000003057	-	87	68.889	ENSMEUG00000000747	EIF2A	79	59.649	Notamacropus_eugenii
ENSCSAVG00000003057	-	98	44.213	ENSOPRG00000014400	EIF2A	95	41.525	Ochotona_princeps
ENSCSAVG00000003057	-	82	42.373	ENSODEG00000001987	-	93	41.791	Octodon_degus
ENSCSAVG00000003057	-	83	43.624	ENSODEG00000000457	-	87	44.543	Octodon_degus
ENSCSAVG00000003057	-	99	43.423	ENSONIG00000017284	eif2a	99	40.741	Oreochromis_niloticus
ENSCSAVG00000003057	-	90	45.493	ENSOANG00000005785	EIF2A	99	43.788	Ornithorhynchus_anatinus
ENSCSAVG00000003057	-	50	42.647	ENSOCUG00000007577	-	90	39.744	Oryctolagus_cuniculus
ENSCSAVG00000003057	-	98	44.906	ENSOCUG00000016095	-	99	43.993	Oryctolagus_cuniculus
ENSCSAVG00000003057	-	52	45.614	ENSOCUG00000013487	-	75	50.213	Oryctolagus_cuniculus
ENSCSAVG00000003057	-	99	42.780	ENSORLG00015012728	eif2a	99	41.146	Oryzias_latipes_hsok
ENSCSAVG00000003057	-	99	43.400	ENSOMEG00000016817	eif2a	99	41.493	Oryzias_melastigma
ENSCSAVG00000003057	-	97	45.109	ENSOGAG00000010148	EIF2A	99	43.316	Otolemur_garnettii
ENSCSAVG00000003057	-	98	44.677	ENSOARG00000004511	EIF2A	99	42.978	Ovis_aries
ENSCSAVG00000003057	-	98	44.423	ENSPPAG00000043784	EIF2A	99	43.471	Pan_paniscus
ENSCSAVG00000003057	-	98	44.612	ENSPPRG00000020244	EIF2A	99	43.655	Panthera_pardus
ENSCSAVG00000003057	-	98	44.717	ENSPTIG00000017401	EIF2A	99	43.655	Panthera_tigris_altaica
ENSCSAVG00000003057	-	98	44.528	ENSPTRG00000015528	EIF2A	99	43.471	Pan_troglodytes
ENSCSAVG00000003057	-	98	44.340	ENSPANG00000017829	EIF2A	99	43.299	Papio_anubis
ENSCSAVG00000003057	-	99	44.165	ENSPKIG00000014595	eif2a	97	41.697	Paramormyrops_kingsleyae
ENSCSAVG00000003057	-	98	44.914	ENSPSIG00000005644	EIF2A	99	44.369	Pelodiscus_sinensis
ENSCSAVG00000003057	-	99	41.877	ENSPMGG00000020947	eif2a	97	40.675	Periophthalmus_magnuspinnatus
ENSCSAVG00000003057	-	98	44.933	ENSPEMG00000015613	Eif2a	99	43.836	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003057	-	98	44.038	ENSPCIG00000022274	EIF2A	99	43.201	Phascolarctos_cinereus
ENSCSAVG00000003057	-	99	43.691	ENSPFOG00000008701	eif2a	93	43.169	Poecilia_formosa
ENSCSAVG00000003057	-	99	43.691	ENSPLAG00000017279	eif2a	93	43.169	Poecilia_latipinna
ENSCSAVG00000003057	-	99	43.902	ENSPMEG00000005215	eif2a	97	41.744	Poecilia_mexicana
ENSCSAVG00000003057	-	98	45.267	ENSPREG00000021793	eif2a	82	45.267	Poecilia_reticulata
ENSCSAVG00000003057	-	65	46.857	ENSPPYG00000029636	-	99	46.649	Pongo_abelii
ENSCSAVG00000003057	-	97	42.173	ENSPCAG00000010767	EIF2A	95	40.855	Procavia_capensis
ENSCSAVG00000003057	-	98	44.991	ENSPCOG00000024978	EIF2A	99	43.993	Propithecus_coquereli
ENSCSAVG00000003057	-	92	43.545	ENSPVAG00000011535	EIF2A	95	42.674	Pteropus_vampyrus
ENSCSAVG00000003057	-	99	43.447	ENSPNYG00000023276	eif2a	99	41.319	Pundamilia_nyererei
ENSCSAVG00000003057	-	98	44.146	ENSPNAG00000022086	eif2a	99	43.106	Pygocentrus_nattereri
ENSCSAVG00000003057	-	98	44.952	ENSRNOG00000013393	Eif2a	97	44.123	Rattus_norvegicus
ENSCSAVG00000003057	-	100	44.170	ENSRBIG00000038363	EIF2A	99	43.299	Rhinopithecus_bieti
ENSCSAVG00000003057	-	100	44.523	ENSRROG00000039293	EIF2A	99	43.643	Rhinopithecus_roxellana
ENSCSAVG00000003057	-	98	44.528	ENSSBOG00000022479	EIF2A	98	43.993	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003057	-	85	45.682	ENSSHAG00000018554	EIF2A	99	45.434	Sarcophilus_harrisii
ENSCSAVG00000003057	-	98	44.297	ENSSFOG00015017634	eif2a	99	41.919	Scleropages_formosus
ENSCSAVG00000003057	-	99	42.830	ENSSMAG00000005233	eif2a	95	42.537	Scophthalmus_maximus
ENSCSAVG00000003057	-	99	42.883	ENSSDUG00000005404	eif2a	99	40.436	Seriola_dumerili
ENSCSAVG00000003057	-	99	42.883	ENSSLDG00000006171	eif2a	99	40.436	Seriola_lalandi_dorsalis
ENSCSAVG00000003057	-	81	44.444	ENSSARG00000013191	EIF2A	93	44.105	Sorex_araneus
ENSCSAVG00000003057	-	98	41.899	ENSSPUG00000010458	EIF2A	98	40.870	Sphenodon_punctatus
ENSCSAVG00000003057	-	82	43.812	ENSSPAG00000005081	eif2a	99	43.355	Stegastes_partitus
ENSCSAVG00000003057	-	97	45.361	ENSSSCG00000011710	EIF2A	98	43.984	Sus_scrofa
ENSCSAVG00000003057	-	98	43.678	ENSTGUG00000011386	EIF2A	99	42.637	Taeniopygia_guttata
ENSCSAVG00000003057	-	92	40.695	ENSTRUG00000002918	eif2a	97	39.479	Takifugu_rubripes
ENSCSAVG00000003057	-	99	42.777	ENSTNIG00000011202	eif2a	95	40.067	Tetraodon_nigroviridis
ENSCSAVG00000003057	-	97	41.953	ENSTBEG00000017179	EIF2A	95	41.286	Tupaia_belangeri
ENSCSAVG00000003057	-	97	42.308	ENSTTRG00000007521	EIF2A	95	40.840	Tursiops_truncatus
ENSCSAVG00000003057	-	98	44.340	ENSUAMG00000027103	EIF2A	98	44.685	Ursus_americanus
ENSCSAVG00000003057	-	97	45.567	ENSUMAG00000012261	EIF2A	96	43.640	Ursus_maritimus
ENSCSAVG00000003057	-	98	45.143	ENSVPAG00000006109	EIF2A	99	43.419	Vicugna_pacos
ENSCSAVG00000003057	-	98	44.340	ENSVVUG00000011028	EIF2A	99	43.816	Vulpes_vulpes
ENSCSAVG00000003057	-	100	43.286	ENSXETG00000020093	eif2a	99	43.003	Xenopus_tropicalis
ENSCSAVG00000003057	-	82	44.802	ENSXCOG00000012657	eif2a	99	41.704	Xiphophorus_couchianus
ENSCSAVG00000003057	-	99	43.503	ENSXMAG00000014008	eif2a	99	42.393	Xiphophorus_maculatus