EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1287 bases
Position: chrreftig_167:408722-410008
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005198	MMR_HSR1	PF01926.23	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005269	-	1287	-	ENSCSAVP00000005198	428 (aa)	-	H2YIP9

Gene Model

Click here to download ENSCSAVG00000003100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003100	-	66	46.102	ENSCSAVG00000003688	-	95	45.263
ENSCSAVG00000003100	-	67	38.393	ENSCSAVG00000007646	-	96	38.988
ENSCSAVG00000003100	-	66	36.585	ENSCSAVG00000001804	-	100	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003100	-	95	95.802	ENSCING00000000219	-	99	95.802	Ciona_intestinalis
ENSCSAVG00000003100	-	95	68.627	FBgn0014029	Sep2	97	68.627	Drosophila_melanogaster