EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003127 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
768 bases
Position
chrreftig_183:200323-201090
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005248Ribosomal_L2_CPF03947.181.9e-4411
ENSCSAVP00000005248Ribosomal_L2PF00181.231.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005319-768-ENSCSAVP00000005248255 (aa)-H2YIU9
Gene Model
Click here to download ENSCSAVG00000003127's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003127's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003127-10077.344ENSG00000161016RPL89983.333Homo_sapiens
ENSCSAVG00000003127-10077.344ENSAPOG00000003954rpl89977.344Acanthochromis_polyacanthus
ENSCSAVG00000003127-10077.344ENSAPOG00000018383-9977.344Acanthochromis_polyacanthus
ENSCSAVG00000003127-10077.344ENSAMEG00000005395RPL89977.344Ailuropoda_melanoleuca
ENSCSAVG00000003127-7132.044ENSACIG00000012738-7732.044Amphilophus_citrinellus
ENSCSAVG00000003127-10077.734ENSACIG00000020232rpl89977.734Amphilophus_citrinellus
ENSCSAVG00000003127-10076.953ENSAOCG00000019406rpl89976.953Amphiprion_ocellaris
ENSCSAVG00000003127-10076.953ENSAPEG00000002868rpl89976.953Amphiprion_percula
ENSCSAVG00000003127-10077.344ENSATEG00000005320rpl89977.344Anabas_testudineus
ENSCSAVG00000003127-9775.600ENSAPLG00000014582RPL89775.600Anas_platyrhynchos
ENSCSAVG00000003127-10077.344ENSACAG00000017933-9977.344Anolis_carolinensis
ENSCSAVG00000003127-10075.391ENSACAG00000009145-9975.391Anolis_carolinensis
ENSCSAVG00000003127-10077.344ENSANAG00000007844-9985.556Aotus_nancymaae
ENSCSAVG00000003127-6562.048ENSANAG00000018683-9862.048Aotus_nancymaae
ENSCSAVG00000003127-10077.734ENSACLG00000025654rpl89377.734Astatotilapia_calliptera
ENSCSAVG00000003127-10076.172ENSAMXG00000043706rpl89976.172Astyanax_mexicanus
ENSCSAVG00000003127-10075.781ENSBTAG00000003560-9975.781Bos_taurus
ENSCSAVG00000003127-10077.344ENSBTAG00000026327RPL89977.344Bos_taurus
ENSCSAVG00000003127-9872.800WBGene00004413rpl-29672.800Caenorhabditis_elegans
ENSCSAVG00000003127-10077.344ENSCJAG00000021388RPL89983.333Callithrix_jacchus
ENSCSAVG00000003127-10077.344ENSCAFG00000001677RPL89977.344Canis_familiaris
ENSCSAVG00000003127-10077.344ENSCAFG00020021034RPL89977.344Canis_lupus_dingo
ENSCSAVG00000003127-10077.344ENSCHIG00000025056RPL89977.344Capra_hircus
ENSCSAVG00000003127-9960.392ENSTSYG00000033452-8560.392Carlito_syrichta
ENSCSAVG00000003127-10077.344ENSTSYG00000009157-9983.333Carlito_syrichta
ENSCSAVG00000003127-9866.534ENSTSYG00000035678-9869.323Carlito_syrichta
ENSCSAVG00000003127-10066.797ENSCAPG00000006217-9966.797Cavia_aperea
ENSCSAVG00000003127-10068.359ENSCPOG00000036122-9968.359Cavia_porcellus
ENSCSAVG00000003127-10077.344ENSCPOG00000003854RPL89977.344Cavia_porcellus
ENSCSAVG00000003127-9961.961ENSCCAG00000026470-9961.961Cebus_capucinus
ENSCSAVG00000003127-6171.613ENSCCAG00000035850-9271.613Cebus_capucinus
ENSCSAVG00000003127-10077.344ENSCCAG00000032759-9983.333Cebus_capucinus
ENSCSAVG00000003127-7161.538ENSCCAG00000001410-9161.538Cebus_capucinus
ENSCSAVG00000003127-10058.984ENSCCAG00000023546-9958.984Cebus_capucinus
ENSCSAVG00000003127-10064.844ENSCCAG00000023421-9964.844Cebus_capucinus
ENSCSAVG00000003127-10059.375ENSCATG00000035333-9959.375Cercocebus_atys
ENSCSAVG00000003127-10077.344ENSCATG00000029003RPL89983.333Cercocebus_atys
ENSCSAVG00000003127-10077.344ENSCLAG00000010832-9977.344Chinchilla_lanigera
ENSCSAVG00000003127-10075.781ENSCSAG00000019435-9975.781Chlorocebus_sabaeus
ENSCSAVG00000003127-10077.344ENSCSAG00000008214RPL89977.344Chlorocebus_sabaeus
ENSCSAVG00000003127-7280.000ENSCSAG00000007461-9980.000Chlorocebus_sabaeus
ENSCSAVG00000003127-10076.562ENSCPBG00000019912RPL89982.353Chrysemys_picta_bellii
ENSCSAVG00000003127-10093.359ENSCING00000023083-10093.359Ciona_intestinalis
ENSCSAVG00000003127-6482.209ENSCANG00000031094-9682.209Colobus_angolensis_palliatus
ENSCSAVG00000003127-10071.094ENSCANG00000017925-9971.094Colobus_angolensis_palliatus
ENSCSAVG00000003127-9065.502ENSCANG00000043762-9465.502Colobus_angolensis_palliatus
ENSCSAVG00000003127-10069.531ENSCGRG00001020900-9969.531Cricetulus_griseus_chok1gshd
ENSCSAVG00000003127-9457.322ENSCGRG00001017476-9259.414Cricetulus_griseus_chok1gshd
ENSCSAVG00000003127-10077.344ENSCGRG00001002982-9977.344Cricetulus_griseus_chok1gshd
ENSCSAVG00000003127-9573.029ENSCGRG00001005314-9673.029Cricetulus_griseus_chok1gshd
ENSCSAVG00000003127-9573.029ENSCGRG00000006443-9673.029Cricetulus_griseus_crigri
ENSCSAVG00000003127-9457.741ENSCGRG00000008422-9259.833Cricetulus_griseus_crigri
ENSCSAVG00000003127-10069.531ENSCGRG00000011524-9969.531Cricetulus_griseus_crigri
ENSCSAVG00000003127-10075.285ENSCGRG00000007961-9975.285Cricetulus_griseus_crigri
ENSCSAVG00000003127-10076.953ENSCSEG00000005223rpl89976.953Cynoglossus_semilaevis
ENSCSAVG00000003127-10077.734ENSCVAG00000015806rpl89977.734Cyprinodon_variegatus
ENSCSAVG00000003127-10078.125ENSDARG00000014867rpl89978.125Danio_rerio
ENSCSAVG00000003127-10076.953ENSDNOG00000009300RPL89976.953Dasypus_novemcinctus
ENSCSAVG00000003127-10077.344ENSDORG00000003352-9977.344Dipodomys_ordii
ENSCSAVG00000003127-10072.941FBgn0261602RpL89972.941Drosophila_melanogaster
ENSCSAVG00000003127-10076.562ENSETEG00000007104RPL89976.562Echinops_telfairi
ENSCSAVG00000003127-5686.139ENSEBUG00000010495rpl89986.139Eptatretus_burgeri
ENSCSAVG00000003127-10076.953ENSEASG00005010978RPL89976.953Equus_asinus_asinus
ENSCSAVG00000003127-10076.953ENSECAG00000008403RPL89983.333Equus_caballus
ENSCSAVG00000003127-10077.344ENSELUG00000023566rpl89977.344Esox_lucius
ENSCSAVG00000003127-10077.344ENSFCAG00000026288RPL89983.333Felis_catus
ENSCSAVG00000003127-10076.562ENSFALG00000001533RPL89976.562Ficedula_albicollis
ENSCSAVG00000003127-10077.344ENSFDAG00000001217RPL89977.344Fukomys_damarensis
ENSCSAVG00000003127-10077.734ENSFHEG00000009770rpl89977.734Fundulus_heteroclitus
ENSCSAVG00000003127-10076.953ENSGMOG00000012966rpl89976.953Gadus_morhua
ENSCSAVG00000003127-10076.562ENSGALG00000016232RPL89976.562Gallus_gallus
ENSCSAVG00000003127-10077.344ENSGAFG00000021160rpl89777.344Gambusia_affinis
ENSCSAVG00000003127-10076.953ENSGACG00000002035rpl89976.953Gasterosteus_aculeatus
ENSCSAVG00000003127-10076.562ENSGAGG00000004064RPL89976.562Gopherus_agassizii
ENSCSAVG00000003127-10077.344ENSGGOG00000008164RPL89983.333Gorilla_gorilla
ENSCSAVG00000003127-10077.734ENSHBUG00000010765rpl89977.734Haplochromis_burtoni
ENSCSAVG00000003127-9462.343ENSHGLG00000017791-9662.343Heterocephalus_glaber_female
ENSCSAVG00000003127-10077.344ENSHGLG00000016268-9977.344Heterocephalus_glaber_female
ENSCSAVG00000003127-5577.895ENSHGLG00000010381-9677.083Heterocephalus_glaber_female
ENSCSAVG00000003127-9661.066ENSHGLG00100005983-9961.066Heterocephalus_glaber_male
ENSCSAVG00000003127-9868.800ENSHGLG00100007134-9768.800Heterocephalus_glaber_male
ENSCSAVG00000003127-10077.344ENSHGLG00100007653-9977.344Heterocephalus_glaber_male
ENSCSAVG00000003127-10077.734ENSHCOG00000014263rpl89977.734Hippocampus_comes
ENSCSAVG00000003127-10076.953ENSIPUG00000023148rpl89976.953Ictalurus_punctatus
ENSCSAVG00000003127-10077.344ENSSTOG00000013016RPL89977.344Ictidomys_tridecemlineatus
ENSCSAVG00000003127-10077.344ENSJJAG00000008974Rpl89977.344Jaculus_jaculus
ENSCSAVG00000003127-10076.953ENSKMAG00000005087rpl89676.953Kryptolebias_marmoratus
ENSCSAVG00000003127-10076.953ENSLBEG00000020852rpl89976.953Labrus_bergylta
ENSCSAVG00000003127-10078.906ENSLACG00000006824RPL89978.906Latimeria_chalumnae
ENSCSAVG00000003127-10048.485ENSLACG00000005788-9948.485Latimeria_chalumnae
ENSCSAVG00000003127-10078.516ENSLOCG00000002206rpl89978.516Lepisosteus_oculatus
ENSCSAVG00000003127-8076.585ENSLAFG00000031938-10076.585Loxodonta_africana
ENSCSAVG00000003127-10062.891ENSMFAG00000032554-9962.891Macaca_fascicularis
ENSCSAVG00000003127-10077.344ENSMFAG00000043225RPL89983.333Macaca_fascicularis
ENSCSAVG00000003127-8865.044ENSMMUG00000023683-9965.044Macaca_mulatta
ENSCSAVG00000003127-10077.344ENSMMUG00000013379RPL89983.333Macaca_mulatta
ENSCSAVG00000003127-10059.375ENSMNEG00000034097-9959.375Macaca_nemestrina
ENSCSAVG00000003127-10077.344ENSMNEG00000032084RPL89983.333Macaca_nemestrina
ENSCSAVG00000003127-8863.717ENSMLEG00000039316-9963.717Mandrillus_leucophaeus
ENSCSAVG00000003127-8278.095ENSMLEG00000030289-9978.095Mandrillus_leucophaeus
ENSCSAVG00000003127-10076.953ENSMAMG00000018769rpl89976.953Mastacembelus_armatus
ENSCSAVG00000003127-10077.734ENSMZEG00005021486rpl89977.734Maylandia_zebra
ENSCSAVG00000003127-10076.562ENSMGAG00000014610RPL89976.562Meleagris_gallopavo
ENSCSAVG00000003127-10077.344ENSMICG00000001569-9983.333Microcebus_murinus
ENSCSAVG00000003127-10077.344ENSMOCG00000001074Rpl89977.344Microtus_ochrogaster
ENSCSAVG00000003127-9860.156ENSMOCG00000015706-9560.156Microtus_ochrogaster
ENSCSAVG00000003127-10077.734ENSMMOG00000019733rpl89977.734Mola_mola
ENSCSAVG00000003127-5872.667ENSMODG00000024900-9972.667Monodelphis_domestica
ENSCSAVG00000003127-10078.125ENSMODG00000004283-9978.125Monodelphis_domestica
ENSCSAVG00000003127-10076.562ENSMALG00000002030rpl89676.562Monopterus_albus
ENSCSAVG00000003127-10077.344MGP_CAROLIEiJ_G0019952-9977.344Mus_caroli
ENSCSAVG00000003127-10077.344ENSMUSG00000003970Rpl89977.344Mus_musculus
ENSCSAVG00000003127-10077.344MGP_PahariEiJ_G0019962Rpl89977.344Mus_pahari
ENSCSAVG00000003127-10077.344ENSMPUG00000006022-9977.344Mustela_putorius_furo
ENSCSAVG00000003127-10077.344ENSMLUG00000016519RPL89977.344Myotis_lucifugus
ENSCSAVG00000003127-10077.344ENSNGAG00000002558Rpl89977.344Nannospalax_galili
ENSCSAVG00000003127-10077.734ENSNBRG00000019585rpl89977.734Neolamprologus_brichardi
ENSCSAVG00000003127-8260.287ENSNLEG00000035106-9760.287Nomascus_leucogenys
ENSCSAVG00000003127-10077.344ENSNLEG00000010952RPL89983.333Nomascus_leucogenys
ENSCSAVG00000003127-10077.734ENSMEUG00000013824RPL89977.734Notamacropus_eugenii
ENSCSAVG00000003127-8074.634ENSOPRG00000010237RPL810074.634Ochotona_princeps
ENSCSAVG00000003127-10063.281ENSODEG00000013958-9963.281Octodon_degus
ENSCSAVG00000003127-10076.562ENSODEG00000020011-9976.562Octodon_degus
ENSCSAVG00000003127-6573.054ENSODEG00000000033-10073.054Octodon_degus
ENSCSAVG00000003127-9169.397ENSODEG00000019300-10069.397Octodon_degus
ENSCSAVG00000003127-10077.734ENSONIG00000006857rpl89977.734Oreochromis_niloticus
ENSCSAVG00000003127-8778.475ENSOANG00000002646RPL89978.475Ornithorhynchus_anatinus
ENSCSAVG00000003127-10077.344ENSOCUG00000024716-9977.344Oryctolagus_cuniculus
ENSCSAVG00000003127-10076.562ENSOCUG00000003706-9976.562Oryctolagus_cuniculus
ENSCSAVG00000003127-10077.344ENSORLG00000010680rpl89977.344Oryzias_latipes
ENSCSAVG00000003127-10077.344ENSORLG00020014864rpl89977.344Oryzias_latipes_hni
ENSCSAVG00000003127-10077.344ENSORLG00015017791rpl89977.344Oryzias_latipes_hsok
ENSCSAVG00000003127-10076.953ENSOMEG00000015010rpl89976.953Oryzias_melastigma
ENSCSAVG00000003127-10077.344ENSOGAG00000016563RPL89977.344Otolemur_garnettii
ENSCSAVG00000003127-10077.344ENSOARG00000012645RPL89977.344Ovis_aries
ENSCSAVG00000003127-10077.344ENSPPAG00000041407RPL89983.333Pan_paniscus
ENSCSAVG00000003127-10077.344ENSPPRG00000009150-9983.333Panthera_pardus
ENSCSAVG00000003127-9875.299ENSPTIG00000017713RPL89983.333Panthera_tigris_altaica
ENSCSAVG00000003127-10077.344ENSPTRG00000020716RPL89983.333Pan_troglodytes
ENSCSAVG00000003127-8861.504ENSPANG00000030980-9961.644Papio_anubis
ENSCSAVG00000003127-10077.344ENSPANG00000029411RPL89983.333Papio_anubis
ENSCSAVG00000003127-9877.689ENSPKIG00000003798-9877.689Paramormyrops_kingsleyae
ENSCSAVG00000003127-10076.953ENSPKIG00000004287RPL89976.953Paramormyrops_kingsleyae
ENSCSAVG00000003127-10076.562ENSPSIG00000010752RPL89976.562Pelodiscus_sinensis
ENSCSAVG00000003127-10076.953ENSPMGG00000012679rpl89976.953Periophthalmus_magnuspinnatus
ENSCSAVG00000003127-10077.344ENSPEMG00000010123-9977.344Peromyscus_maniculatus_bairdii
ENSCSAVG00000003127-7675.385ENSPMAG00000008745rpl89975.385Petromyzon_marinus
ENSCSAVG00000003127-5775.000ENSPCIG00000015010-9975.000Phascolarctos_cinereus
ENSCSAVG00000003127-10077.734ENSPCIG00000018928-9977.734Phascolarctos_cinereus
ENSCSAVG00000003127-8569.444ENSPCIG00000020262-10069.444Phascolarctos_cinereus
ENSCSAVG00000003127-10077.734ENSPFOG00000014562rpl89977.734Poecilia_formosa
ENSCSAVG00000003127-10077.734ENSPLAG00000018241rpl89177.734Poecilia_latipinna
ENSCSAVG00000003127-10077.734ENSPMEG00000012679rpl89977.734Poecilia_mexicana
ENSCSAVG00000003127-10077.734ENSPREG00000004710rpl89977.734Poecilia_reticulata
ENSCSAVG00000003127-10077.344ENSPPYG00000018991RPL89977.344Pongo_abelii
ENSCSAVG00000003127-10077.344ENSPCAG00000007056RPL89977.344Procavia_capensis
ENSCSAVG00000003127-10077.344ENSPCOG00000015651RPL89883.000Propithecus_coquereli
ENSCSAVG00000003127-9857.600ENSPCOG00000015481-9957.600Propithecus_coquereli
ENSCSAVG00000003127-10068.359ENSPVAG00000004292RPL89968.359Pteropus_vampyrus
ENSCSAVG00000003127-10077.734ENSPNYG00000010707rpl89977.734Pundamilia_nyererei
ENSCSAVG00000003127-10077.344ENSPNAG00000020229rpl89977.344Pygocentrus_nattereri
ENSCSAVG00000003127-10077.344ENSRNOG00000048456Rpl89977.344Rattus_norvegicus
ENSCSAVG00000003127-10077.344ENSRNOG00000048523LOC1083481429977.344Rattus_norvegicus
ENSCSAVG00000003127-10076.172ENSRNOG00000031381AC129049.19976.172Rattus_norvegicus
ENSCSAVG00000003127-10077.344ENSRNOG00000032635LOC1003601179977.344Rattus_norvegicus
ENSCSAVG00000003127-10064.844ENSRBIG00000037275-9964.844Rhinopithecus_bieti
ENSCSAVG00000003127-10077.344ENSRBIG00000029613-9983.333Rhinopithecus_bieti
ENSCSAVG00000003127-6471.779ENSRROG00000015309-9971.779Rhinopithecus_roxellana
ENSCSAVG00000003127-10077.344ENSRROG00000027288-9983.333Rhinopithecus_roxellana
ENSCSAVG00000003127-9677.642ENSRROG00000040580-9577.642Rhinopithecus_roxellana
ENSCSAVG00000003127-7167.760ENSRROG00000043588-9664.789Rhinopithecus_roxellana
ENSCSAVG00000003127-9968.504YIL018WRPL2B10068.504Saccharomyces_cerevisiae
ENSCSAVG00000003127-9968.504YFR031C-ARPL2A10068.504Saccharomyces_cerevisiae
ENSCSAVG00000003127-6562.048ENSSBOG00000022771-9962.048Saimiri_boliviensis_boliviensis
ENSCSAVG00000003127-7155.191ENSSBOG00000020538-9055.191Saimiri_boliviensis_boliviensis
ENSCSAVG00000003127-10077.734ENSSHAG00000013568RPL89977.734Sarcophilus_harrisii
ENSCSAVG00000003127-10077.734ENSSFOG00015022286rpl89377.734Scleropages_formosus
ENSCSAVG00000003127-10077.344ENSSMAG00000004617rpl89977.344Scophthalmus_maximus
ENSCSAVG00000003127-10077.344ENSSDUG00000010473rpl89977.344Seriola_dumerili
ENSCSAVG00000003127-10077.344ENSSLDG00000023024rpl89977.344Seriola_lalandi_dorsalis
ENSCSAVG00000003127-9867.200ENSSLDG00000011567-9867.200Seriola_lalandi_dorsalis
ENSCSAVG00000003127-9763.052ENSSARG00000008430-9863.052Sorex_araneus
ENSCSAVG00000003127-10077.344ENSSPUG00000005349RPL89983.333Sphenodon_punctatus
ENSCSAVG00000003127-10070.703ENSSPAG00000008593rpl89970.703Stegastes_partitus
ENSCSAVG00000003127-9854.582ENSSSCG00000009838-9954.582Sus_scrofa
ENSCSAVG00000003127-6948.295ENSSSCG00000034644-8050.625Sus_scrofa
ENSCSAVG00000003127-10077.344ENSSSCG00000029830RPL89977.344Sus_scrofa
ENSCSAVG00000003127-10076.562ENSTGUG00000006502-9776.562Taeniopygia_guttata
ENSCSAVG00000003127-6375.625ENSTGUG00000013958-10075.625Taeniopygia_guttata
ENSCSAVG00000003127-9375.314ENSTRUG00000013973rpl88375.314Takifugu_rubripes
ENSCSAVG00000003127-10076.953ENSTNIG00000005285rpl89976.953Tetraodon_nigroviridis
ENSCSAVG00000003127-8672.603ENSTBEG00000010363RPL89972.603Tupaia_belangeri
ENSCSAVG00000003127-10077.344ENSTTRG00000013858RPL89977.344Tursiops_truncatus
ENSCSAVG00000003127-10077.344ENSUAMG00000007856RPL89977.344Ursus_americanus
ENSCSAVG00000003127-7678.061ENSUMAG00000019359RPL88478.061Ursus_maritimus
ENSCSAVG00000003127-10077.344ENSVVUG00000005507-9977.344Vulpes_vulpes
ENSCSAVG00000003127-10078.516ENSXETG00000015483rpl89978.516Xenopus_tropicalis
ENSCSAVG00000003127-10077.734ENSXCOG00000018568rpl89977.734Xiphophorus_couchianus
ENSCSAVG00000003127-10077.734ENSXMAG00000017781rpl89977.734Xiphophorus_maculatus

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