EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003140 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1961 bases
Position: chrreftig_21:340591-342551
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005270	RIO1	PF01163.22	3.4e-07	1	1
ENSCSAVP00000005269	RIO1	PF01163.22	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005340	-	804	-	ENSCSAVP00000005269	163 (aa)	-	H2YIX0
ENSCSAVT00000005341	-	660	-	ENSCSAVP00000005270	220 (aa)	-	H2YIX1

Gene Model

Click here to download ENSCSAVG00000003140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003140	-	98	50.691	ENSG00000172315	TP53RK	85	50.691	Homo_sapiens
ENSCSAVG00000003140	-	97	56.818	ENSAPOG00000007130	tp53rk	95	56.818	Acanthochromis_polyacanthus
ENSCSAVG00000003140	-	76	52.353	ENSAMEG00000000007	TP53RK	99	52.353	Ailuropoda_melanoleuca
ENSCSAVG00000003140	-	97	56.422	ENSACIG00000000770	tp53rk	95	56.422	Amphilophus_citrinellus
ENSCSAVG00000003140	-	97	56.364	ENSAOCG00000009426	tp53rk	95	56.364	Amphiprion_ocellaris
ENSCSAVG00000003140	-	97	55.909	ENSAPEG00000017566	tp53rk	95	55.909	Amphiprion_percula
ENSCSAVG00000003140	-	97	55.046	ENSATEG00000003109	tp53rk	95	55.046	Anabas_testudineus
ENSCSAVG00000003140	-	98	54.128	ENSACAG00000016698	TP53RK	87	54.128	Anolis_carolinensis
ENSCSAVG00000003140	-	98	51.152	ENSANAG00000021017	TP53RK	85	51.152	Aotus_nancymaae
ENSCSAVG00000003140	-	93	54.808	ENSACLG00000026597	tp53rk	93	54.808	Astatotilapia_calliptera
ENSCSAVG00000003140	-	97	54.839	ENSAMXG00000040578	tp53rk	91	54.839	Astyanax_mexicanus
ENSCSAVG00000003140	-	98	52.074	ENSBTAG00000027326	TP53RK	85	52.074	Bos_taurus
ENSCSAVG00000003140	-	97	42.791	WBGene00138717	F52C12.6	87	42.791	Caenorhabditis_elegans
ENSCSAVG00000003140	-	98	51.152	ENSCJAG00000039826	TP53RK	85	51.152	Callithrix_jacchus
ENSCSAVG00000003140	-	98	50.691	ENSCAFG00000029496	TP53RK	72	50.691	Canis_familiaris
ENSCSAVG00000003140	-	98	50.691	ENSCAFG00020015159	TP53RK	85	50.691	Canis_lupus_dingo
ENSCSAVG00000003140	-	98	52.535	ENSCHIG00000026217	-	85	52.535	Capra_hircus
ENSCSAVG00000003140	-	98	52.535	ENSCHIG00000011635	-	85	52.535	Capra_hircus
ENSCSAVG00000003140	-	98	49.309	ENSCPOG00000005477	TP53RK	88	49.309	Cavia_porcellus
ENSCSAVG00000003140	-	98	51.613	ENSCCAG00000025781	TP53RK	85	51.613	Cebus_capucinus
ENSCSAVG00000003140	-	98	50.691	ENSCATG00000042243	TP53RK	85	50.691	Cercocebus_atys
ENSCSAVG00000003140	-	98	51.835	ENSCLAG00000015459	TP53RK	88	51.835	Chinchilla_lanigera
ENSCSAVG00000003140	-	98	51.152	ENSCSAG00000014864	TP53RK	85	51.152	Chlorocebus_sabaeus
ENSCSAVG00000003140	-	70	49.682	ENSCHOG00000005034	TP53RK	99	49.682	Choloepus_hoffmanni
ENSCSAVG00000003140	-	98	53.670	ENSCPBG00000026757	TP53RK	91	53.670	Chrysemys_picta_bellii
ENSCSAVG00000003140	-	98	50.691	ENSCANG00000034367	-	85	50.691	Colobus_angolensis_palliatus
ENSCSAVG00000003140	-	98	47.465	ENSCANG00000034667	-	88	47.465	Colobus_angolensis_palliatus
ENSCSAVG00000003140	-	98	52.535	ENSCGRG00001017009	-	86	52.535	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003140	-	71	51.572	ENSCGRG00000008894	-	80	51.572	Cricetulus_griseus_crigri
ENSCSAVG00000003140	-	97	54.464	ENSCSEG00000020246	tp53rk	95	54.464	Cynoglossus_semilaevis
ENSCSAVG00000003140	-	97	52.778	ENSDARG00000112667	tp53rk	91	52.778	Danio_rerio
ENSCSAVG00000003140	-	98	51.152	ENSDNOG00000003789	TP53RK	85	51.152	Dasypus_novemcinctus
ENSCSAVG00000003140	-	98	41.629	FBgn0035590	Prpk	98	41.629	Drosophila_melanogaster
ENSCSAVG00000003140	-	98	51.152	ENSETEG00000009174	TP53RK	85	51.152	Echinops_telfairi
ENSCSAVG00000003140	-	98	46.721	ENSEBUG00000000968	tp53rk	89	46.721	Eptatretus_burgeri
ENSCSAVG00000003140	-	98	50.691	ENSEASG00005023356	TP53RK	85	50.691	Equus_asinus_asinus
ENSCSAVG00000003140	-	98	50.691	ENSECAG00000038590	TP53RK	85	50.691	Equus_caballus
ENSCSAVG00000003140	-	98	49.309	ENSEEUG00000014466	TP53RK	86	49.309	Erinaceus_europaeus
ENSCSAVG00000003140	-	96	55.760	ENSELUG00000013117	tp53rk	91	55.760	Esox_lucius
ENSCSAVG00000003140	-	98	50.691	ENSFCAG00000040607	TP53RK	85	50.691	Felis_catus
ENSCSAVG00000003140	-	79	50.562	ENSFALG00000005147	TP53RK	99	50.562	Ficedula_albicollis
ENSCSAVG00000003140	-	98	39.631	ENSFDAG00000015505	TP53RK	85	39.631	Fukomys_damarensis
ENSCSAVG00000003140	-	97	52.941	ENSGMOG00000017301	tp53rk	92	52.941	Gadus_morhua
ENSCSAVG00000003140	-	97	53.182	ENSGAFG00000008308	tp53rk	95	53.182	Gambusia_affinis
ENSCSAVG00000003140	-	97	54.338	ENSGACG00000011424	tp53rk	92	54.338	Gasterosteus_aculeatus
ENSCSAVG00000003140	-	98	54.128	ENSGAGG00000024362	TP53RK	91	54.128	Gopherus_agassizii
ENSCSAVG00000003140	-	98	50.691	ENSGGOG00000002063	TP53RK	85	50.691	Gorilla_gorilla
ENSCSAVG00000003140	-	97	56.422	ENSHBUG00000003738	tp53rk	92	56.422	Haplochromis_burtoni
ENSCSAVG00000003140	-	97	49.537	ENSHGLG00000004532	TP53RK	87	49.537	Heterocephalus_glaber_female
ENSCSAVG00000003140	-	97	50.000	ENSHGLG00100001420	TP53RK	87	50.000	Heterocephalus_glaber_male
ENSCSAVG00000003140	-	97	53.881	ENSHCOG00000015970	tp53rk	92	53.881	Hippocampus_comes
ENSCSAVG00000003140	-	97	56.481	ENSIPUG00000002500	tp53rk	91	56.481	Ictalurus_punctatus
ENSCSAVG00000003140	-	98	51.152	ENSSTOG00000023195	TP53RK	88	51.152	Ictidomys_tridecemlineatus
ENSCSAVG00000003140	-	98	49.309	ENSJJAG00000017483	-	88	49.309	Jaculus_jaculus
ENSCSAVG00000003140	-	97	55.760	ENSKMAG00000013771	tp53rk	95	55.760	Kryptolebias_marmoratus
ENSCSAVG00000003140	-	98	57.798	ENSLACG00000009114	TP53RK	93	57.798	Latimeria_chalumnae
ENSCSAVG00000003140	-	98	54.338	ENSLOCG00000002129	tp53rk	84	54.338	Lepisosteus_oculatus
ENSCSAVG00000003140	-	98	50.691	ENSLAFG00000002452	TP53RK	88	50.691	Loxodonta_africana
ENSCSAVG00000003140	-	98	51.152	ENSMFAG00000042174	TP53RK	85	51.152	Macaca_fascicularis
ENSCSAVG00000003140	-	98	51.152	ENSMNEG00000035758	TP53RK	85	51.152	Macaca_nemestrina
ENSCSAVG00000003140	-	98	51.152	ENSMLEG00000042123	TP53RK	85	51.152	Mandrillus_leucophaeus
ENSCSAVG00000003140	-	92	52.381	ENSMAMG00000000432	tp53rk	85	52.381	Mastacembelus_armatus
ENSCSAVG00000003140	-	97	56.422	ENSMZEG00005004953	tp53rk	92	56.422	Maylandia_zebra
ENSCSAVG00000003140	-	98	52.535	ENSMAUG00000018147	-	88	52.535	Mesocricetus_auratus
ENSCSAVG00000003140	-	98	51.152	ENSMICG00000030995	TP53RK	85	51.152	Microcebus_murinus
ENSCSAVG00000003140	-	98	50.691	ENSMOCG00000020701	-	88	50.691	Microtus_ochrogaster
ENSCSAVG00000003140	-	96	47.418	ENSMOCG00000004008	-	93	47.926	Microtus_ochrogaster
ENSCSAVG00000003140	-	97	44.700	ENSMMOG00000009664	tp53rk	84	44.700	Mola_mola
ENSCSAVG00000003140	-	80	42.105	ENSMODG00000028859	-	63	42.105	Monodelphis_domestica
ENSCSAVG00000003140	-	97	56.054	ENSMALG00000016276	tp53rk	92	56.054	Monopterus_albus
ENSCSAVG00000003140	-	98	50.230	MGP_CAROLIEiJ_G0024689	-	89	50.230	Mus_caroli
ENSCSAVG00000003140	-	98	50.230	ENSMUSG00000039725	Trp53rka	89	50.230	Mus_musculus
ENSCSAVG00000003140	-	98	50.691	ENSMUSG00000042854	Trp53rkb	89	50.691	Mus_musculus
ENSCSAVG00000003140	-	98	50.230	MGP_PahariEiJ_G0026131	-	89	50.230	Mus_pahari
ENSCSAVG00000003140	-	98	50.691	MGP_SPRETEiJ_G0025616	Trp53rkb	89	50.691	Mus_spretus
ENSCSAVG00000003140	-	98	50.691	MGP_SPRETEiJ_G0025609	Trp53rka	89	50.691	Mus_spretus
ENSCSAVG00000003140	-	98	51.598	ENSMLUG00000012340	TP53RK	84	51.598	Myotis_lucifugus
ENSCSAVG00000003140	-	98	48.611	ENSNGAG00000015004	-	88	48.611	Nannospalax_galili
ENSCSAVG00000003140	-	98	51.152	ENSNGAG00000017924	-	88	51.152	Nannospalax_galili
ENSCSAVG00000003140	-	98	50.691	ENSNLEG00000029775	TP53RK	85	50.691	Nomascus_leucogenys
ENSCSAVG00000003140	-	98	52.535	ENSMEUG00000002329	TP53RK	86	52.535	Notamacropus_eugenii
ENSCSAVG00000003140	-	98	49.309	ENSOPRG00000002155	TP53RK	87	49.309	Ochotona_princeps
ENSCSAVG00000003140	-	98	51.376	ENSODEG00000009596	TP53RK	88	51.376	Octodon_degus
ENSCSAVG00000003140	-	97	57.339	ENSONIG00000003139	tp53rk	86	57.339	Oreochromis_niloticus
ENSCSAVG00000003140	-	97	53.670	ENSORLG00000027986	tp53rk	95	53.670	Oryzias_latipes
ENSCSAVG00000003140	-	97	53.670	ENSORLG00020001150	tp53rk	95	53.670	Oryzias_latipes_hni
ENSCSAVG00000003140	-	97	53.211	ENSORLG00015022941	tp53rk	79	53.211	Oryzias_latipes_hsok
ENSCSAVG00000003140	-	97	51.835	ENSOMEG00000015137	tp53rk	95	51.835	Oryzias_melastigma
ENSCSAVG00000003140	-	98	50.230	ENSOGAG00000012689	TP53RK	85	50.230	Otolemur_garnettii
ENSCSAVG00000003140	-	98	52.535	ENSOARG00000009156	TP53RK	85	52.535	Ovis_aries
ENSCSAVG00000003140	-	98	50.691	ENSPPAG00000038588	TP53RK	85	50.691	Pan_paniscus
ENSCSAVG00000003140	-	98	50.691	ENSPPRG00000010845	TP53RK	85	50.691	Panthera_pardus
ENSCSAVG00000003140	-	70	49.682	ENSPTIG00000009801	TP53RK	67	49.682	Panthera_tigris_altaica
ENSCSAVG00000003140	-	98	50.691	ENSPTRG00000051150	TP53RK	85	50.691	Pan_troglodytes
ENSCSAVG00000003140	-	98	51.152	ENSPANG00000020822	TP53RK	85	51.152	Papio_anubis
ENSCSAVG00000003140	-	98	55.909	ENSPKIG00000003915	tp53rk	92	55.909	Paramormyrops_kingsleyae
ENSCSAVG00000003140	-	98	53.425	ENSPSIG00000012226	TP53RK	85	53.425	Pelodiscus_sinensis
ENSCSAVG00000003140	-	97	57.991	ENSPMGG00000008635	tp53rk	82	57.991	Periophthalmus_magnuspinnatus
ENSCSAVG00000003140	-	98	50.000	ENSPMAG00000001764	tp53rk	86	50.000	Petromyzon_marinus
ENSCSAVG00000003140	-	97	53.636	ENSPFOG00000011783	tp53rk	95	53.636	Poecilia_formosa
ENSCSAVG00000003140	-	97	53.670	ENSPLAG00000012951	tp53rk	95	53.670	Poecilia_latipinna
ENSCSAVG00000003140	-	97	53.636	ENSPMEG00000015978	tp53rk	95	53.636	Poecilia_mexicana
ENSCSAVG00000003140	-	97	53.636	ENSPREG00000021035	tp53rk	92	53.636	Poecilia_reticulata
ENSCSAVG00000003140	-	98	50.230	ENSPPYG00000011097	TP53RK	85	50.230	Pongo_abelii
ENSCSAVG00000003140	-	98	51.613	ENSPCAG00000014248	TP53RK	85	51.613	Procavia_capensis
ENSCSAVG00000003140	-	98	51.152	ENSPCOG00000021538	TP53RK	85	51.152	Propithecus_coquereli
ENSCSAVG00000003140	-	97	55.963	ENSPNYG00000007461	tp53rk	92	55.963	Pundamilia_nyererei
ENSCSAVG00000003140	-	97	56.944	ENSPNAG00000007871	tp53rk	90	56.944	Pygocentrus_nattereri
ENSCSAVG00000003140	-	98	51.613	ENSRNOG00000007285	Tp53rk	89	51.613	Rattus_norvegicus
ENSCSAVG00000003140	-	98	51.152	ENSRNOG00000029470	LOC685619	84	51.152	Rattus_norvegicus
ENSCSAVG00000003140	-	98	50.691	ENSRBIG00000034747	TP53RK	85	50.691	Rhinopithecus_bieti
ENSCSAVG00000003140	-	98	50.691	ENSRROG00000007671	TP53RK	85	50.691	Rhinopithecus_roxellana
ENSCSAVG00000003140	-	98	51.152	ENSSBOG00000028863	TP53RK	85	51.152	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003140	-	98	51.152	ENSSHAG00000002155	TP53RK	84	51.152	Sarcophilus_harrisii
ENSCSAVG00000003140	-	98	53.211	ENSSFOG00015001790	tp53rk	92	53.211	Scleropages_formosus
ENSCSAVG00000003140	-	97	50.431	ENSSMAG00000016610	tp53rk	85	50.431	Scophthalmus_maximus
ENSCSAVG00000003140	-	98	55.251	ENSSDUG00000006796	tp53rk	93	55.251	Seriola_dumerili
ENSCSAVG00000003140	-	97	55.505	ENSSLDG00000021017	tp53rk	92	55.505	Seriola_lalandi_dorsalis
ENSCSAVG00000003140	-	98	49.083	ENSSPUG00000003590	TP53RK	87	49.083	Sphenodon_punctatus
ENSCSAVG00000003140	-	97	56.054	ENSSPAG00000003918	tp53rk	95	56.054	Stegastes_partitus
ENSCSAVG00000003140	-	98	52.535	ENSSSCG00000007452	TP53RK	85	52.535	Sus_scrofa
ENSCSAVG00000003140	-	98	53.917	ENSTRUG00000021182	tp53rk	93	53.917	Takifugu_rubripes
ENSCSAVG00000003140	-	97	54.167	ENSTNIG00000003803	tp53rk	91	54.167	Tetraodon_nigroviridis
ENSCSAVG00000003140	-	98	52.074	ENSTBEG00000016574	TP53RK	85	52.074	Tupaia_belangeri
ENSCSAVG00000003140	-	98	52.074	ENSTTRG00000007142	TP53RK	86	52.074	Tursiops_truncatus
ENSCSAVG00000003140	-	98	50.691	ENSUAMG00000021617	TP53RK	85	50.691	Ursus_americanus
ENSCSAVG00000003140	-	98	50.691	ENSVVUG00000016557	TP53RK	72	50.691	Vulpes_vulpes
ENSCSAVG00000003140	-	98	55.251	ENSXETG00000003469	tp53rk	89	55.251	Xenopus_tropicalis
ENSCSAVG00000003140	-	71	50.920	ENSXCOG00000003917	tp53rk	75	50.920	Xiphophorus_couchianus
ENSCSAVG00000003140	-	97	52.727	ENSXMAG00000025503	-	95	52.727	Xiphophorus_maculatus
ENSCSAVG00000003140	-	97	52.727	ENSXMAG00000023174	tp53rk	95	52.727	Xiphophorus_maculatus
ENSCSAVG00000003140	-	90	45.366	ENSXMAG00000020079	-	99	45.366	Xiphophorus_maculatus
ENSCSAVG00000003140	-	97	52.727	ENSXMAG00000021217	TP53RK	95	52.727	Xiphophorus_maculatus