EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003263 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6316 bases
Position: chrreftig_77:591355-597670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005463	tRNA-synt_1b	PF00579.25	4.2e-57	1	1
ENSCSAVP00000005466	tRNA-synt_1b	PF00579.25	1.5e-55	1	1
ENSCSAVP00000005464	tRNA-synt_1b	PF00579.25	3.1e-55	1	1
ENSCSAVP00000005467	tRNA-synt_1b	PF00579.25	2.8e-54	1	1
ENSCSAVP00000005465	tRNA-synt_1b	PF00579.25	4.8e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005537	-	1058	-	ENSCSAVP00000005465	340 (aa)	-	H2YJG6
ENSCSAVT00000005536	-	1346	-	ENSCSAVP00000005464	339 (aa)	-	H2YJG5
ENSCSAVT00000005535	-	1445	-	ENSCSAVP00000005463	368 (aa)	-	H2YJG4
ENSCSAVT00000005539	-	1017	-	ENSCSAVP00000005467	339 (aa)	-	H2YJG8
ENSCSAVT00000005538	-	1017	-	ENSCSAVP00000005466	338 (aa)	-	H2YJG7

Gene Model

Click here to download ENSCSAVG00000003263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003263	-	98	45.345	ENSG00000116874	WARS2	90	46.154	Homo_sapiens
ENSCSAVG00000003263	-	99	48.204	ENSAPOG00000015140	wars2	95	49.538	Acanthochromis_polyacanthus
ENSCSAVG00000003263	-	98	47.147	ENSAMEG00000008147	WARS2	88	47.840	Ailuropoda_melanoleuca
ENSCSAVG00000003263	-	99	48.802	ENSACIG00000006912	wars2	92	50.155	Amphilophus_citrinellus
ENSCSAVG00000003263	-	75	44.841	ENSAOCG00000019628	wars2	77	45.714	Amphiprion_ocellaris
ENSCSAVG00000003263	-	99	48.802	ENSAPEG00000018028	wars2	92	50.467	Amphiprion_percula
ENSCSAVG00000003263	-	99	49.701	ENSATEG00000001096	wars2	97	51.084	Anabas_testudineus
ENSCSAVG00000003263	-	99	48.048	ENSAPLG00000009702	WARS2	98	49.387	Anas_platyrhynchos
ENSCSAVG00000003263	-	98	48.193	ENSACAG00000008122	WARS2	98	47.605	Anolis_carolinensis
ENSCSAVG00000003263	-	99	45.509	ENSANAG00000023161	WARS2	92	45.509	Aotus_nancymaae
ENSCSAVG00000003263	-	99	48.802	ENSACLG00000017174	wars2	90	50.462	Astatotilapia_calliptera
ENSCSAVG00000003263	-	99	47.305	ENSAMXG00000043045	wars2	92	48.615	Astyanax_mexicanus
ENSCSAVG00000003263	-	98	47.590	ENSBTAG00000005064	WARS2	90	48.000	Bos_taurus
ENSCSAVG00000003263	-	99	37.870	WBGene00006946	prx-10	91	38.671	Caenorhabditis_elegans
ENSCSAVG00000003263	-	99	46.108	ENSCJAG00000005653	WARS2	96	47.077	Callithrix_jacchus
ENSCSAVG00000003263	-	99	47.305	ENSCAFG00000009996	WARS2	90	48.148	Canis_familiaris
ENSCSAVG00000003263	-	99	47.305	ENSCAFG00020020570	WARS2	90	48.148	Canis_lupus_dingo
ENSCSAVG00000003263	-	98	47.289	ENSCHIG00000013499	WARS2	90	47.385	Capra_hircus
ENSCSAVG00000003263	-	98	46.847	ENSTSYG00000013527	WARS2	90	47.692	Carlito_syrichta
ENSCSAVG00000003263	-	99	39.820	ENSCAPG00000016564	WARS2	98	41.433	Cavia_aperea
ENSCSAVG00000003263	-	99	46.707	ENSCPOG00000000616	WARS2	90	47.692	Cavia_porcellus
ENSCSAVG00000003263	-	99	46.407	ENSCCAG00000034099	WARS2	82	46.407	Cebus_capucinus
ENSCSAVG00000003263	-	99	45.808	ENSCATG00000041648	WARS2	98	47.239	Cercocebus_atys
ENSCSAVG00000003263	-	99	46.707	ENSCLAG00000004926	WARS2	92	47.164	Chinchilla_lanigera
ENSCSAVG00000003263	-	99	45.808	ENSCSAG00000001713	WARS2	90	47.239	Chlorocebus_sabaeus
ENSCSAVG00000003263	-	53	54.749	ENSCHOG00000000186	WARS2	64	57.059	Choloepus_hoffmanni
ENSCSAVG00000003263	-	99	47.147	ENSCPBG00000001321	WARS2	99	46.705	Chrysemys_picta_bellii
ENSCSAVG00000003263	-	98	46.687	ENSCANG00000028345	WARS2	90	47.546	Colobus_angolensis_palliatus
ENSCSAVG00000003263	-	99	47.305	ENSCGRG00001018718	Wars2	90	48.457	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003263	-	99	47.305	ENSCGRG00000001125	Wars2	90	48.457	Cricetulus_griseus_crigri
ENSCSAVG00000003263	-	99	49.405	ENSCSEG00000009273	wars2	94	50.153	Cynoglossus_semilaevis
ENSCSAVG00000003263	-	99	50.000	ENSCVAG00000009790	wars2	94	51.393	Cyprinodon_variegatus
ENSCSAVG00000003263	-	99	48.649	ENSDARG00000011801	wars2	91	48.060	Danio_rerio
ENSCSAVG00000003263	-	99	43.750	ENSDNOG00000049516	WARS2	90	44.954	Dasypus_novemcinctus
ENSCSAVG00000003263	-	99	45.345	ENSDORG00000008562	Wars2	92	45.946	Dipodomys_ordii
ENSCSAVG00000003263	-	99	42.388	FBgn0036763	TrpRS-m	52	42.319	Drosophila_melanogaster
ENSCSAVG00000003263	-	98	46.386	ENSETEG00000019834	WARS2	90	47.368	Echinops_telfairi
ENSCSAVG00000003263	-	97	36.053	ENSEBUG00000007183	-	95	37.127	Eptatretus_burgeri
ENSCSAVG00000003263	-	99	47.006	ENSEASG00005006403	WARS2	83	48.000	Equus_asinus_asinus
ENSCSAVG00000003263	-	99	47.305	ENSECAG00000021622	WARS2	83	48.308	Equus_caballus
ENSCSAVG00000003263	-	98	45.482	ENSEEUG00000002792	WARS2	90	46.462	Erinaceus_europaeus
ENSCSAVG00000003263	-	93	46.326	ENSELUG00000006039	wars2	86	47.059	Esox_lucius
ENSCSAVG00000003263	-	98	48.048	ENSFCAG00000007370	WARS2	90	48.923	Felis_catus
ENSCSAVG00000003263	-	99	47.748	ENSFALG00000005028	WARS2	98	49.080	Ficedula_albicollis
ENSCSAVG00000003263	-	99	46.707	ENSFDAG00000009379	WARS2	90	48.308	Fukomys_damarensis
ENSCSAVG00000003263	-	99	49.102	ENSFHEG00000015611	wars2	88	50.464	Fundulus_heteroclitus
ENSCSAVG00000003263	-	99	48.348	ENSGALG00000014772	WARS2	99	48.817	Gallus_gallus
ENSCSAVG00000003263	-	99	49.552	ENSGAFG00000013237	wars2	96	47.383	Gambusia_affinis
ENSCSAVG00000003263	-	99	46.847	ENSGAGG00000010316	WARS2	99	48.160	Gopherus_agassizii
ENSCSAVG00000003263	-	98	45.646	ENSGGOG00000015028	WARS2	98	46.462	Gorilla_gorilla
ENSCSAVG00000003263	-	99	48.802	ENSHBUG00000004154	wars2	88	50.462	Haplochromis_burtoni
ENSCSAVG00000003263	-	99	47.305	ENSHGLG00000009507	WARS2	90	48.308	Heterocephalus_glaber_female
ENSCSAVG00000003263	-	99	47.305	ENSHGLG00100006143	WARS2	90	48.308	Heterocephalus_glaber_male
ENSCSAVG00000003263	-	99	48.657	ENSHCOG00000003597	wars2	86	47.965	Hippocampus_comes
ENSCSAVG00000003263	-	99	46.707	ENSIPUG00000003502	wars2	92	48.000	Ictalurus_punctatus
ENSCSAVG00000003263	-	99	46.407	ENSSTOG00000013051	WARS2	90	47.385	Ictidomys_tridecemlineatus
ENSCSAVG00000003263	-	99	46.866	ENSJJAG00000000897	Wars2	90	47.853	Jaculus_jaculus
ENSCSAVG00000003263	-	99	49.850	ENSKMAG00000014374	wars2	88	50.617	Kryptolebias_marmoratus
ENSCSAVG00000003263	-	99	49.102	ENSLBEG00000013918	wars2	97	50.464	Labrus_bergylta
ENSCSAVG00000003263	-	99	42.814	ENSLACG00000005629	WARS2	89	44.615	Latimeria_chalumnae
ENSCSAVG00000003263	-	99	47.904	ENSLOCG00000011009	wars2	98	46.893	Lepisosteus_oculatus
ENSCSAVG00000003263	-	98	46.547	ENSLAFG00000018455	WARS2	90	47.385	Loxodonta_africana
ENSCSAVG00000003263	-	98	45.619	ENSMFAG00000001270	WARS2	87	46.749	Macaca_fascicularis
ENSCSAVG00000003263	-	99	45.509	ENSMMUG00000041046	WARS2	90	46.933	Macaca_mulatta
ENSCSAVG00000003263	-	99	45.509	ENSMNEG00000029069	WARS2	89	46.933	Macaca_nemestrina
ENSCSAVG00000003263	-	99	45.808	ENSMLEG00000028699	WARS2	90	47.239	Mandrillus_leucophaeus
ENSCSAVG00000003263	-	99	48.802	ENSMAMG00000020704	wars2	90	50.155	Mastacembelus_armatus
ENSCSAVG00000003263	-	99	48.802	ENSMZEG00005019270	wars2	88	50.462	Maylandia_zebra
ENSCSAVG00000003263	-	81	43.066	ENSMGAG00000014233	WARS2	99	44.569	Meleagris_gallopavo
ENSCSAVG00000003263	-	99	47.605	ENSMAUG00000006394	Wars2	90	48.765	Mesocricetus_auratus
ENSCSAVG00000003263	-	99	46.707	ENSMICG00000026450	WARS2	99	43.071	Microcebus_murinus
ENSCSAVG00000003263	-	99	48.802	ENSMOCG00000005144	Wars2	90	50.000	Microtus_ochrogaster
ENSCSAVG00000003263	-	99	49.102	ENSMMOG00000019428	wars2	95	48.688	Mola_mola
ENSCSAVG00000003263	-	98	47.147	ENSMODG00000005334	WARS2	92	48.204	Monodelphis_domestica
ENSCSAVG00000003263	-	99	48.503	ENSMALG00000016450	wars2	87	50.154	Monopterus_albus
ENSCSAVG00000003263	-	99	47.006	ENSMUSG00000004233	Wars2	93	45.104	Mus_musculus
ENSCSAVG00000003263	-	99	47.305	MGP_PahariEiJ_G0026862	Wars2	90	48.308	Mus_pahari
ENSCSAVG00000003263	-	99	44.507	MGP_SPRETEiJ_G0026368	Wars2	79	58.273	Mus_spretus
ENSCSAVG00000003263	-	98	47.147	ENSMPUG00000001541	WARS2	90	48.000	Mustela_putorius_furo
ENSCSAVG00000003263	-	99	46.726	ENSMLUG00000002965	WARS2	92	47.706	Myotis_lucifugus
ENSCSAVG00000003263	-	99	49.102	ENSNBRG00000010952	wars2	97	50.769	Neolamprologus_brichardi
ENSCSAVG00000003263	-	99	45.509	ENSNLEG00000005349	WARS2	90	46.462	Nomascus_leucogenys
ENSCSAVG00000003263	-	75	34.524	ENSMEUG00000005313	-	68	36.327	Notamacropus_eugenii
ENSCSAVG00000003263	-	98	45.946	ENSOPRG00000004874	WARS2	90	46.914	Ochotona_princeps
ENSCSAVG00000003263	-	99	45.808	ENSODEG00000001212	WARS2	90	47.385	Octodon_degus
ENSCSAVG00000003263	-	99	49.102	ENSONIG00000015691	wars2	89	50.769	Oreochromis_niloticus
ENSCSAVG00000003263	-	99	46.866	ENSOANG00000002254	WARS2	90	48.308	Ornithorhynchus_anatinus
ENSCSAVG00000003263	-	99	46.567	ENSOCUG00000012330	WARS2	82	47.692	Oryctolagus_cuniculus
ENSCSAVG00000003263	-	99	48.214	ENSORLG00000008482	wars2	95	48.494	Oryzias_latipes
ENSCSAVG00000003263	-	99	47.619	ENSORLG00020022461	wars2	99	48.036	Oryzias_latipes_hni
ENSCSAVG00000003263	-	99	47.917	ENSORLG00015022386	wars2	99	47.214	Oryzias_latipes_hsok
ENSCSAVG00000003263	-	99	48.214	ENSOMEG00000017027	wars2	90	49.240	Oryzias_melastigma
ENSCSAVG00000003263	-	99	45.509	ENSOGAG00000007285	WARS2	98	46.769	Otolemur_garnettii
ENSCSAVG00000003263	-	98	47.590	ENSOARG00000020381	WARS2	90	47.692	Ovis_aries
ENSCSAVG00000003263	-	98	45.345	ENSPPAG00000032746	WARS2	94	47.115	Pan_paniscus
ENSCSAVG00000003263	-	99	47.904	ENSPPRG00000017754	WARS2	90	48.923	Panthera_pardus
ENSCSAVG00000003263	-	99	47.904	ENSPTIG00000021158	WARS2	90	48.923	Panthera_tigris_altaica
ENSCSAVG00000003263	-	98	45.345	ENSPTRG00000001173	WARS2	94	47.115	Pan_troglodytes
ENSCSAVG00000003263	-	98	45.921	ENSPANG00000011381	WARS2	87	47.059	Papio_anubis
ENSCSAVG00000003263	-	99	46.429	ENSPKIG00000024865	wars2	96	45.098	Paramormyrops_kingsleyae
ENSCSAVG00000003263	-	99	46.108	ENSPSIG00000017566	WARS2	98	48.000	Pelodiscus_sinensis
ENSCSAVG00000003263	-	99	49.851	ENSPMGG00000022666	wars2	99	50.920	Periophthalmus_magnuspinnatus
ENSCSAVG00000003263	-	99	47.305	ENSPEMG00000018152	Wars2	90	48.308	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003263	-	99	45.210	ENSPCIG00000029906	WARS2	92	46.547	Phascolarctos_cinereus
ENSCSAVG00000003263	-	99	48.955	ENSPFOG00000018055	wars2	96	46.556	Poecilia_formosa
ENSCSAVG00000003263	-	99	48.657	ENSPLAG00000007267	wars2	95	48.378	Poecilia_latipinna
ENSCSAVG00000003263	-	98	48.943	ENSPMEG00000007565	WARS2	98	47.875	Poecilia_mexicana
ENSCSAVG00000003263	-	99	48.802	ENSPREG00000019589	wars2	94	47.006	Poecilia_reticulata
ENSCSAVG00000003263	-	98	45.646	ENSPPYG00000000967	WARS2	90	46.462	Pongo_abelii
ENSCSAVG00000003263	-	98	46.970	ENSPCAG00000016581	WARS2	95	45.349	Procavia_capensis
ENSCSAVG00000003263	-	99	46.707	ENSPCOG00000026406	WARS2	96	45.954	Propithecus_coquereli
ENSCSAVG00000003263	-	99	45.210	ENSPVAG00000001920	WARS2	90	46.154	Pteropus_vampyrus
ENSCSAVG00000003263	-	53	55.618	ENSPNYG00000006314	wars2	75	57.895	Pundamilia_nyererei
ENSCSAVG00000003263	-	99	48.503	ENSPNAG00000001529	wars2	88	49.846	Pygocentrus_nattereri
ENSCSAVG00000003263	-	99	47.305	ENSRNOG00000019508	Wars2	90	48.457	Rattus_norvegicus
ENSCSAVG00000003263	-	99	45.808	ENSRBIG00000019074	WARS2	90	47.239	Rhinopithecus_bieti
ENSCSAVG00000003263	-	75	40.476	ENSRROG00000032725	WARS2	99	41.463	Rhinopithecus_roxellana
ENSCSAVG00000003263	-	99	34.857	YDR268W	MSW1	93	33.898	Saccharomyces_cerevisiae
ENSCSAVG00000003263	-	99	46.707	ENSSBOG00000032994	WARS2	92	46.707	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003263	-	98	45.808	ENSSHAG00000013680	WARS2	92	46.866	Sarcophilus_harrisii
ENSCSAVG00000003263	-	76	51.751	ENSSFOG00015000616	wars2	66	54.065	Scleropages_formosus
ENSCSAVG00000003263	-	70	64.444	ENSSFOG00015005317	-	80	62.500	Scleropages_formosus
ENSCSAVG00000003263	-	99	49.102	ENSSMAG00000008263	wars2	88	50.464	Scophthalmus_maximus
ENSCSAVG00000003263	-	99	50.299	ENSSDUG00000014223	wars2	91	51.703	Seriola_dumerili
ENSCSAVG00000003263	-	99	50.299	ENSSLDG00000012949	wars2	95	51.703	Seriola_lalandi_dorsalis
ENSCSAVG00000003263	-	99	45.373	ENSSARG00000011146	WARS2	90	46.933	Sorex_araneus
ENSCSAVG00000003263	-	99	44.910	ENSSPUG00000005313	WARS2	92	46.687	Sphenodon_punctatus
ENSCSAVG00000003263	-	99	47.904	ENSSPAG00000013998	wars2	92	48.615	Stegastes_partitus
ENSCSAVG00000003263	-	98	46.386	ENSSSCG00000027153	WARS2	84	46.605	Sus_scrofa
ENSCSAVG00000003263	-	99	46.547	ENSTGUG00000013353	-	98	47.853	Taeniopygia_guttata
ENSCSAVG00000003263	-	99	49.401	ENSTRUG00000016079	wars2	88	50.774	Takifugu_rubripes
ENSCSAVG00000003263	-	99	49.401	ENSTNIG00000015661	wars2	96	50.774	Tetraodon_nigroviridis
ENSCSAVG00000003263	-	99	46.108	ENSTBEG00000014634	WARS2	90	47.692	Tupaia_belangeri
ENSCSAVG00000003263	-	98	45.783	ENSTTRG00000000108	WARS2	90	45.846	Tursiops_truncatus
ENSCSAVG00000003263	-	98	47.447	ENSUMAG00000000553	WARS2	90	48.148	Ursus_maritimus
ENSCSAVG00000003263	-	99	44.910	ENSVPAG00000010266	WARS2	89	45.846	Vicugna_pacos
ENSCSAVG00000003263	-	99	47.305	ENSVVUG00000010766	WARS2	90	48.148	Vulpes_vulpes
ENSCSAVG00000003263	-	55	52.973	ENSXCOG00000018178	wars2	76	54.545	Xiphophorus_couchianus
ENSCSAVG00000003263	-	99	48.358	ENSXMAG00000021964	wars2	96	46.006	Xiphophorus_maculatus