EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003294 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
9327 bases
Position
chrreftig_132:239382-248708
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005508KH_1PF00013.295.8e-6014
ENSCSAVP00000005508KH_1PF00013.295.8e-6024
ENSCSAVP00000005508KH_1PF00013.295.8e-6034
ENSCSAVP00000005508KH_1PF00013.295.8e-6044
ENSCSAVP00000005510KH_1PF00013.291.2e-5414
ENSCSAVP00000005510KH_1PF00013.291.2e-5424
ENSCSAVP00000005510KH_1PF00013.291.2e-5434
ENSCSAVP00000005510KH_1PF00013.291.2e-5444
ENSCSAVP00000005505KH_1PF00013.291.3e-5414
ENSCSAVP00000005505KH_1PF00013.291.3e-5424
ENSCSAVP00000005505KH_1PF00013.291.3e-5434
ENSCSAVP00000005505KH_1PF00013.291.3e-5444
ENSCSAVP00000005509KH_1PF00013.294.4e-5314
ENSCSAVP00000005509KH_1PF00013.294.4e-5324
ENSCSAVP00000005509KH_1PF00013.294.4e-5334
ENSCSAVP00000005509KH_1PF00013.294.4e-5344
ENSCSAVP00000005506KH_1PF00013.293.1e-3312
ENSCSAVP00000005506KH_1PF00013.293.1e-3322
ENSCSAVP00000005507KH_1PF00013.297.2e-1611
ENSCSAVP00000005507KH_2PF07650.177.4e-0611
ENSCSAVP00000005506DUF1897PF09005.102.1e-1012
ENSCSAVP00000005506DUF1897PF09005.102.1e-1022
ENSCSAVP00000005508DUF1897PF09005.103.9e-0811
ENSCSAVP00000005510DUF1897PF09005.101.2e-0711
ENSCSAVP00000005509DUF1897PF09005.101.6e-0711
ENSCSAVP00000005505DUF1897PF09005.101.8e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005584-1842-ENSCSAVP00000005510529 (aa)-H2YJL1
ENSCSAVT00000005582-1607-ENSCSAVP00000005508465 (aa)-H2YJK9
ENSCSAVT00000005583-1736-ENSCSAVP00000005509520 (aa)-H2YJL0
ENSCSAVT00000005580-1764-ENSCSAVP00000005506492 (aa)-H2YJK7
ENSCSAVT00000005581-479-ENSCSAVP0000000550777 (aa)-H2YJK8
ENSCSAVT00000005579-1838-ENSCSAVP00000005505541 (aa)-H2YJK6
Gene Model
Click here to download ENSCSAVG00000003294's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003294's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000003294-9198.571ENSCSAVG00000003258-100100.000
ENSCSAVG00000003294-7630.460ENSCSAVG00000009137-5932.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003294-9149.091WBGene00007534C12D8.18632.657Caenorhabditis_elegans
ENSCSAVG00000003294-9192.857ENSCING00000009628-9087.417Ciona_intestinalis
ENSCSAVG00000003294-9733.096FBgn0014870Psi8634.201Drosophila_melanogaster

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