EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5643 bases
Position: chrreftig_35:169667-175309
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005513	G-patch	PF01585.23	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005587	-	779	-	ENSCSAVP00000005513	256 (aa)	-	H2YJL4

Gene Model

Click here to download ENSCSAVG00000003297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003297	-	64	41.916	ENSG00000160818	GPATCH4	80	40.196	Homo_sapiens
ENSCSAVG00000003297	-	64	41.566	ENSCJAG00000006048	GPATCH4	76	41.000	Callithrix_jacchus
ENSCSAVG00000003297	-	64	41.566	ENSCCAG00000036114	GPATCH4	76	41.000	Cebus_capucinus
ENSCSAVG00000003297	-	64	41.916	ENSCATG00000042152	GPATCH4	71	39.815	Cercocebus_atys
ENSCSAVG00000003297	-	64	51.462	ENSCPBG00000025803	GPATCH4	56	51.462	Chrysemys_picta_bellii
ENSCSAVG00000003297	-	64	63.030	ENSCING00000004717	-	66	63.030	Ciona_intestinalis
ENSCSAVG00000003297	-	94	34.298	ENSCANG00000030031	GPATCH4	69	39.623	Colobus_angolensis_palliatus
ENSCSAVG00000003297	-	64	44.886	ENSDARG00000091931	gpatch4	56	43.519	Danio_rerio
ENSCSAVG00000003297	-	61	42.593	ENSEBUG00000006498	-	54	41.975	Eptatretus_burgeri
ENSCSAVG00000003297	-	65	45.143	ENSGAFG00000021732	gpatch4	55	45.349	Gambusia_affinis
ENSCSAVG00000003297	-	65	41.573	ENSGACG00000013318	gpatch4	53	42.045	Gasterosteus_aculeatus
ENSCSAVG00000003297	-	64	52.047	ENSGAGG00000020710	GPATCH4	56	50.877	Gopherus_agassizii
ENSCSAVG00000003297	-	64	41.916	ENSGGOG00000000753	GPATCH4	69	39.623	Gorilla_gorilla
ENSCSAVG00000003297	-	64	44.509	ENSIPUG00000006348	gpatch4	55	41.718	Ictalurus_punctatus
ENSCSAVG00000003297	-	64	43.529	ENSSTOG00000020510	GPATCH4	75	41.284	Ictidomys_tridecemlineatus
ENSCSAVG00000003297	-	65	42.857	ENSLBEG00000009364	-	53	41.243	Labrus_bergylta
ENSCSAVG00000003297	-	64	38.043	ENSLOCG00000008820	gpatch4	50	38.798	Lepisosteus_oculatus
ENSCSAVG00000003297	-	64	41.916	ENSMFAG00000030965	GPATCH4	71	39.815	Macaca_fascicularis
ENSCSAVG00000003297	-	64	41.916	ENSMMUG00000002624	GPATCH4	71	39.815	Macaca_mulatta
ENSCSAVG00000003297	-	64	41.317	ENSMNEG00000028844	GPATCH4	71	38.889	Macaca_nemestrina
ENSCSAVG00000003297	-	64	42.515	ENSMLEG00000037909	GPATCH4	71	40.741	Mandrillus_leucophaeus
ENSCSAVG00000003297	-	59	37.013	ENSMICG00000038615	-	82	36.000	Microcebus_murinus
ENSCSAVG00000003297	-	59	35.948	ENSMICG00000034025	-	77	40.000	Microcebus_murinus
ENSCSAVG00000003297	-	65	43.258	ENSMMOG00000017095	gpatch4	59	51.562	Mola_mola
ENSCSAVG00000003297	-	64	47.368	ENSMODG00000014154	-	80	45.562	Monodelphis_domestica
ENSCSAVG00000003297	-	64	48.214	ENSMODG00000016818	-	57	47.305	Monodelphis_domestica
ENSCSAVG00000003297	-	64	43.452	MGP_CAROLIEiJ_G0025152	Gpatch4	66	43.636	Mus_caroli
ENSCSAVG00000003297	-	64	42.515	ENSMUSG00000028069	Gpatch4	67	42.515	Mus_musculus
ENSCSAVG00000003297	-	64	43.114	MGP_PahariEiJ_G0026595	-	66	43.636	Mus_pahari
ENSCSAVG00000003297	-	97	35.714	MGP_SPRETEiJ_G0026093	Gpatch4	67	42.515	Mus_spretus
ENSCSAVG00000003297	-	64	43.195	ENSMEUG00000006861	-	59	41.916	Notamacropus_eugenii
ENSCSAVG00000003297	-	64	41.916	ENSPPAG00000028364	-	69	39.623	Pan_paniscus
ENSCSAVG00000003297	-	64	42.515	ENSPTIG00000006717	GPATCH4	66	41.000	Panthera_tigris_altaica
ENSCSAVG00000003297	-	64	41.916	ENSPTRG00000001464	GPATCH4	69	39.623	Pan_troglodytes
ENSCSAVG00000003297	-	64	41.916	ENSPANG00000018543	GPATCH4	71	39.815	Papio_anubis
ENSCSAVG00000003297	-	64	51.190	ENSPSIG00000011317	GPATCH4	60	50.292	Pelodiscus_sinensis
ENSCSAVG00000003297	-	79	42.130	ENSPMAG00000009175	gpatch4	62	45.810	Petromyzon_marinus
ENSCSAVG00000003297	-	56	38.621	ENSPCOG00000023130	-	67	41.667	Propithecus_coquereli
ENSCSAVG00000003297	-	58	38.158	ENSPCOG00000013948	-	77	39.815	Propithecus_coquereli
ENSCSAVG00000003297	-	64	41.916	ENSRBIG00000005742	GPATCH4	69	40.000	Rhinopithecus_bieti
ENSCSAVG00000003297	-	64	41.916	ENSRROG00000044157	GPATCH4	69	40.000	Rhinopithecus_roxellana
ENSCSAVG00000003297	-	64	47.904	ENSSHAG00000015436	-	91	38.258	Sarcophilus_harrisii
ENSCSAVG00000003297	-	64	51.462	ENSSPUG00000002674	GPATCH4	58	50.877	Sphenodon_punctatus
ENSCSAVG00000003297	-	64	43.575	ENSTNIG00000005156	gpatch4	61	43.017	Tetraodon_nigroviridis
ENSCSAVG00000003297	-	61	41.509	ENSVVUG00000006004	-	69	42.000	Vulpes_vulpes
ENSCSAVG00000003297	-	64	47.126	ENSXETG00000020397	gpatch4	58	47.126	Xenopus_tropicalis