EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003299 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 10900 bases
Position: chrreftig_51:995625-1006524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005516	IBN_N	PF03810.19	8.6e-12	1	1
ENSCSAVP00000005515	IBN_N	PF03810.19	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005590	-	3079	-	ENSCSAVP00000005516	986 (aa)	-	H2YJL7
ENSCSAVT00000005589	-	3051	-	ENSCSAVP00000005515	976 (aa)	-	H2YJL6

Gene Model

Click here to download ENSCSAVG00000003299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003299	-	98	62.591	ENSG00000124207	CSE1L	98	62.591	Homo_sapiens
ENSCSAVG00000003299	-	98	62.176	ENSAPOG00000015943	cse1l	98	62.176	Acanthochromis_polyacanthus
ENSCSAVG00000003299	-	98	62.591	ENSAMEG00000013717	CSE1L	98	62.591	Ailuropoda_melanoleuca
ENSCSAVG00000003299	-	98	56.477	ENSACIG00000020004	cse1l	98	56.923	Amphilophus_citrinellus
ENSCSAVG00000003299	-	98	62.383	ENSAOCG00000004356	cse1l	98	62.383	Amphiprion_ocellaris
ENSCSAVG00000003299	-	98	62.487	ENSAPEG00000016588	cse1l	98	62.487	Amphiprion_percula
ENSCSAVG00000003299	-	98	62.694	ENSATEG00000005414	cse1l	98	62.694	Anabas_testudineus
ENSCSAVG00000003299	-	98	62.383	ENSAPLG00000010368	CSE1L	98	62.383	Anas_platyrhynchos
ENSCSAVG00000003299	-	98	62.280	ENSACAG00000015951	CSE1L	98	62.280	Anolis_carolinensis
ENSCSAVG00000003299	-	98	60.622	ENSANAG00000023526	CSE1L	98	60.622	Aotus_nancymaae
ENSCSAVG00000003299	-	98	59.689	ENSACLG00000023214	cse1l	98	60.000	Astatotilapia_calliptera
ENSCSAVG00000003299	-	98	62.798	ENSAMXG00000016416	cse1l	98	62.798	Astyanax_mexicanus
ENSCSAVG00000003299	-	98	62.591	ENSBTAG00000005957	CSE1L	98	62.591	Bos_taurus
ENSCSAVG00000003299	-	98	31.166	WBGene00002079	xpo-2	99	31.166	Caenorhabditis_elegans
ENSCSAVG00000003299	-	98	62.694	ENSCJAG00000016296	CSE1L	98	62.694	Callithrix_jacchus
ENSCSAVG00000003299	-	98	62.591	ENSCAFG00000011260	CSE1L	98	62.591	Canis_familiaris
ENSCSAVG00000003299	-	98	61.969	ENSCAFG00020016114	CSE1L	98	61.969	Canis_lupus_dingo
ENSCSAVG00000003299	-	98	62.591	ENSCHIG00000016579	CSE1L	98	62.591	Capra_hircus
ENSCSAVG00000003299	-	98	62.591	ENSTSYG00000013400	CSE1L	98	62.591	Carlito_syrichta
ENSCSAVG00000003299	-	98	56.859	ENSCAPG00000004349	-	99	56.859	Cavia_aperea
ENSCSAVG00000003299	-	98	50.410	ENSCAPG00000000237	-	98	50.570	Cavia_aperea
ENSCSAVG00000003299	-	98	62.487	ENSCPOG00000005554	-	98	62.487	Cavia_porcellus
ENSCSAVG00000003299	-	98	56.649	ENSCPOG00000023180	-	99	56.649	Cavia_porcellus
ENSCSAVG00000003299	-	98	62.591	ENSCCAG00000014373	CSE1L	98	62.591	Cebus_capucinus
ENSCSAVG00000003299	-	98	62.591	ENSCATG00000039153	CSE1L	98	62.591	Cercocebus_atys
ENSCSAVG00000003299	-	98	61.969	ENSCLAG00000006169	CSE1L	98	61.969	Chinchilla_lanigera
ENSCSAVG00000003299	-	98	62.591	ENSCSAG00000014977	CSE1L	98	62.591	Chlorocebus_sabaeus
ENSCSAVG00000003299	-	98	60.725	ENSCHOG00000004640	CSE1L	98	60.725	Choloepus_hoffmanni
ENSCSAVG00000003299	-	98	61.865	ENSCPBG00000026743	CSE1L	98	61.865	Chrysemys_picta_bellii
ENSCSAVG00000003299	-	99	85.744	ENSCING00000002277	-	100	85.744	Ciona_intestinalis
ENSCSAVG00000003299	-	98	61.451	ENSCANG00000041300	CSE1L	98	61.451	Colobus_angolensis_palliatus
ENSCSAVG00000003299	-	98	62.487	ENSCGRG00001005670	Cse1l	98	62.487	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003299	-	98	62.487	ENSCGRG00000012164	Cse1l	98	62.487	Cricetulus_griseus_crigri
ENSCSAVG00000003299	-	98	62.280	ENSCSEG00000002471	cse1l	98	62.280	Cynoglossus_semilaevis
ENSCSAVG00000003299	-	98	62.073	ENSCVAG00000004319	cse1l	98	62.073	Cyprinodon_variegatus
ENSCSAVG00000003299	-	98	62.487	ENSDARG00000006963	cse1l	98	62.487	Danio_rerio
ENSCSAVG00000003299	-	98	62.591	ENSDNOG00000014906	CSE1L	98	62.591	Dasypus_novemcinctus
ENSCSAVG00000003299	-	90	67.391	ENSDORG00000013960	Cse1l	98	67.391	Dipodomys_ordii
ENSCSAVG00000003299	-	98	48.450	FBgn0022213	Cse1	99	48.450	Drosophila_melanogaster
ENSCSAVG00000003299	-	71	64.372	ENSEBUG00000011135	cse1l	91	64.575	Eptatretus_burgeri
ENSCSAVG00000003299	-	98	62.487	ENSEASG00005023345	CSE1L	98	61.713	Equus_asinus_asinus
ENSCSAVG00000003299	-	98	62.383	ENSECAG00000015543	CSE1L	96	62.383	Equus_caballus
ENSCSAVG00000003299	-	98	62.487	ENSELUG00000001309	cse1l	98	62.487	Esox_lucius
ENSCSAVG00000003299	-	98	62.591	ENSFCAG00000001446	CSE1L	98	62.591	Felis_catus
ENSCSAVG00000003299	-	98	61.865	ENSFALG00000012932	CSE1L	96	61.865	Ficedula_albicollis
ENSCSAVG00000003299	-	98	62.280	ENSFDAG00000005180	CSE1L	98	62.280	Fukomys_damarensis
ENSCSAVG00000003299	-	83	62.834	ENSFHEG00000005939	cse1l	91	63.503	Fundulus_heteroclitus
ENSCSAVG00000003299	-	98	62.902	ENSGMOG00000007944	cse1l	98	62.902	Gadus_morhua
ENSCSAVG00000003299	-	98	62.280	ENSGALG00000004707	CSE1L	98	62.280	Gallus_gallus
ENSCSAVG00000003299	-	98	61.762	ENSGAFG00000021631	cse1l	98	62.280	Gambusia_affinis
ENSCSAVG00000003299	-	98	62.176	ENSGACG00000000963	cse1l	98	62.176	Gasterosteus_aculeatus
ENSCSAVG00000003299	-	96	62.128	ENSGAGG00000012815	CSE1L	98	62.128	Gopherus_agassizii
ENSCSAVG00000003299	-	98	62.487	ENSGGOG00000010875	CSE1L	98	62.487	Gorilla_gorilla
ENSCSAVG00000003299	-	98	62.487	ENSHBUG00000013599	cse1l	98	62.487	Haplochromis_burtoni
ENSCSAVG00000003299	-	98	62.798	ENSHGLG00000009067	CSE1L	98	62.798	Heterocephalus_glaber_female
ENSCSAVG00000003299	-	98	56.386	ENSHGLG00000014944	-	98	56.386	Heterocephalus_glaber_female
ENSCSAVG00000003299	-	98	62.798	ENSHGLG00100001243	CSE1L	98	62.798	Heterocephalus_glaber_male
ENSCSAVG00000003299	-	98	56.166	ENSHGLG00100014942	-	98	56.166	Heterocephalus_glaber_male
ENSCSAVG00000003299	-	96	63.839	ENSHCOG00000005034	cse1l	96	63.839	Hippocampus_comes
ENSCSAVG00000003299	-	98	62.694	ENSIPUG00000023752	cse1l	98	62.694	Ictalurus_punctatus
ENSCSAVG00000003299	-	98	62.383	ENSSTOG00000003600	CSE1L	98	62.383	Ictidomys_tridecemlineatus
ENSCSAVG00000003299	-	98	62.798	ENSJJAG00000016509	Cse1l	98	62.798	Jaculus_jaculus
ENSCSAVG00000003299	-	98	62.280	ENSKMAG00000021099	cse1l	98	62.798	Kryptolebias_marmoratus
ENSCSAVG00000003299	-	98	62.798	ENSLBEG00000012480	cse1l	96	62.920	Labrus_bergylta
ENSCSAVG00000003299	-	98	62.280	ENSLACG00000015970	CSE1L	98	62.280	Latimeria_chalumnae
ENSCSAVG00000003299	-	98	62.487	ENSLOCG00000003099	cse1l	98	62.487	Lepisosteus_oculatus
ENSCSAVG00000003299	-	98	62.383	ENSLAFG00000006607	CSE1L	98	62.383	Loxodonta_africana
ENSCSAVG00000003299	-	98	62.591	ENSMFAG00000034230	CSE1L	98	62.591	Macaca_fascicularis
ENSCSAVG00000003299	-	98	60.765	ENSMMUG00000019636	CSE1L	99	60.765	Macaca_mulatta
ENSCSAVG00000003299	-	98	62.591	ENSMNEG00000031340	CSE1L	98	62.591	Macaca_nemestrina
ENSCSAVG00000003299	-	91	62.606	ENSMLEG00000042388	CSE1L	98	61.556	Mandrillus_leucophaeus
ENSCSAVG00000003299	-	98	62.591	ENSMAMG00000023931	cse1l	98	62.591	Mastacembelus_armatus
ENSCSAVG00000003299	-	98	62.487	ENSMZEG00005010674	cse1l	98	62.487	Maylandia_zebra
ENSCSAVG00000003299	-	98	62.591	ENSMAUG00000001362	Cse1l	98	62.591	Mesocricetus_auratus
ENSCSAVG00000003299	-	98	62.383	ENSMICG00000001988	CSE1L	98	62.383	Microcebus_murinus
ENSCSAVG00000003299	-	98	62.383	ENSMOCG00000013597	Cse1l	98	62.383	Microtus_ochrogaster
ENSCSAVG00000003299	-	98	59.793	ENSMMOG00000021787	cse1l	98	59.793	Mola_mola
ENSCSAVG00000003299	-	98	62.487	ENSMODG00000016269	CSE1L	98	62.487	Monodelphis_domestica
ENSCSAVG00000003299	-	98	62.073	ENSMALG00000017385	cse1l	98	62.073	Monopterus_albus
ENSCSAVG00000003299	-	98	62.591	MGP_CAROLIEiJ_G0024698	Cse1l	98	62.591	Mus_caroli
ENSCSAVG00000003299	-	98	62.591	ENSMUSG00000002718	Cse1l	98	62.591	Mus_musculus
ENSCSAVG00000003299	-	98	62.591	MGP_PahariEiJ_G0026140	Cse1l	98	62.591	Mus_pahari
ENSCSAVG00000003299	-	98	62.591	MGP_SPRETEiJ_G0025618	Cse1l	98	62.591	Mus_spretus
ENSCSAVG00000003299	-	98	62.487	ENSMPUG00000017586	CSE1L	98	62.487	Mustela_putorius_furo
ENSCSAVG00000003299	-	98	61.036	ENSMLUG00000008368	CSE1L	98	61.036	Myotis_lucifugus
ENSCSAVG00000003299	-	98	62.629	ENSNGAG00000001115	Cse1l	98	62.629	Nannospalax_galili
ENSCSAVG00000003299	-	98	62.383	ENSNBRG00000005053	cse1l	98	62.383	Neolamprologus_brichardi
ENSCSAVG00000003299	-	98	61.658	ENSNLEG00000006945	CSE1L	98	61.658	Nomascus_leucogenys
ENSCSAVG00000003299	-	62	69.737	ENSMEUG00000005658	-	63	69.737	Notamacropus_eugenii
ENSCSAVG00000003299	-	87	61.951	ENSOPRG00000014530	CSE1L	87	61.951	Ochotona_princeps
ENSCSAVG00000003299	-	98	62.694	ENSODEG00000006918	-	98	62.694	Octodon_degus
ENSCSAVG00000003299	-	98	62.902	ENSONIG00000018970	cse1l	98	62.902	Oreochromis_niloticus
ENSCSAVG00000003299	-	98	62.176	ENSOANG00000006402	CSE1L	98	62.176	Ornithorhynchus_anatinus
ENSCSAVG00000003299	-	98	62.526	ENSOCUG00000005459	CSE1L	98	62.526	Oryctolagus_cuniculus
ENSCSAVG00000003299	-	99	61.944	ENSORLG00000000603	cse1l	99	62.461	Oryzias_latipes
ENSCSAVG00000003299	-	99	55.533	ENSORLG00020007653	cse1l	99	56.499	Oryzias_latipes_hni
ENSCSAVG00000003299	-	54	65.537	ENSORLG00015003694	cse1l	94	65.537	Oryzias_latipes_hsok
ENSCSAVG00000003299	-	99	62.461	ENSOMEG00000014357	cse1l	99	62.978	Oryzias_melastigma
ENSCSAVG00000003299	-	98	60.847	ENSOGAG00000002126	CSE1L	98	60.847	Otolemur_garnettii
ENSCSAVG00000003299	-	98	62.526	ENSOARG00000012031	CSE1L	98	62.526	Ovis_aries
ENSCSAVG00000003299	-	98	62.591	ENSPPAG00000038391	CSE1L	98	62.591	Pan_paniscus
ENSCSAVG00000003299	-	98	62.591	ENSPPRG00000022681	CSE1L	98	62.591	Panthera_pardus
ENSCSAVG00000003299	-	98	62.591	ENSPTIG00000011919	CSE1L	98	62.591	Panthera_tigris_altaica
ENSCSAVG00000003299	-	98	62.591	ENSPTRG00000013599	CSE1L	98	62.591	Pan_troglodytes
ENSCSAVG00000003299	-	98	60.933	ENSPANG00000026147	CSE1L	98	60.933	Papio_anubis
ENSCSAVG00000003299	-	98	63.109	ENSPKIG00000024520	cse1l	98	63.109	Paramormyrops_kingsleyae
ENSCSAVG00000003299	-	98	62.073	ENSPSIG00000010864	CSE1L	97	62.073	Pelodiscus_sinensis
ENSCSAVG00000003299	-	98	62.487	ENSPEMG00000000944	Cse1l	98	62.487	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003299	-	98	62.487	ENSPCIG00000023472	CSE1L	98	62.487	Phascolarctos_cinereus
ENSCSAVG00000003299	-	98	62.073	ENSPFOG00000001989	cse1l	98	62.591	Poecilia_formosa
ENSCSAVG00000003299	-	98	62.073	ENSPLAG00000015012	cse1l	98	62.591	Poecilia_latipinna
ENSCSAVG00000003299	-	98	62.073	ENSPMEG00000022671	cse1l	98	62.591	Poecilia_mexicana
ENSCSAVG00000003299	-	98	62.280	ENSPREG00000009081	cse1l	98	62.798	Poecilia_reticulata
ENSCSAVG00000003299	-	98	62.591	ENSPPYG00000011110	CSE1L	98	62.591	Pongo_abelii
ENSCSAVG00000003299	-	75	64.791	ENSPCAG00000007508	CSE1L	80	64.791	Procavia_capensis
ENSCSAVG00000003299	-	89	66.185	ENSPCOG00000026411	CSE1L	98	66.185	Propithecus_coquereli
ENSCSAVG00000003299	-	98	59.423	ENSPVAG00000015014	CSE1L	99	59.729	Pteropus_vampyrus
ENSCSAVG00000003299	-	98	62.591	ENSPNYG00000007058	cse1l	98	62.591	Pundamilia_nyererei
ENSCSAVG00000003299	-	98	63.109	ENSPNAG00000012903	cse1l	98	63.109	Pygocentrus_nattereri
ENSCSAVG00000003299	-	98	62.280	ENSRNOG00000007665	Cse1l	98	62.280	Rattus_norvegicus
ENSCSAVG00000003299	-	98	62.591	ENSRBIG00000029361	CSE1L	98	62.591	Rhinopithecus_bieti
ENSCSAVG00000003299	-	98	62.591	ENSRROG00000021686	CSE1L	98	62.591	Rhinopithecus_roxellana
ENSCSAVG00000003299	-	94	35.225	YGL238W	CSE1	95	35.225	Saccharomyces_cerevisiae
ENSCSAVG00000003299	-	98	62.591	ENSSBOG00000021396	CSE1L	98	62.591	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003299	-	99	62.565	ENSSFOG00015021428	cse1l	99	62.565	Scleropages_formosus
ENSCSAVG00000003299	-	98	62.280	ENSSMAG00000000580	cse1l	94	62.280	Scophthalmus_maximus
ENSCSAVG00000003299	-	98	62.383	ENSSDUG00000012110	cse1l	98	62.383	Seriola_dumerili
ENSCSAVG00000003299	-	98	62.280	ENSSLDG00000022083	cse1l	98	62.280	Seriola_lalandi_dorsalis
ENSCSAVG00000003299	-	98	62.280	ENSSPUG00000017941	CSE1L	98	62.280	Sphenodon_punctatus
ENSCSAVG00000003299	-	98	62.176	ENSSPAG00000008182	cse1l	98	62.176	Stegastes_partitus
ENSCSAVG00000003299	-	98	62.487	ENSSSCG00000025534	CSE1L	98	62.487	Sus_scrofa
ENSCSAVG00000003299	-	98	61.969	ENSTGUG00000008823	CSE1L	98	61.969	Taeniopygia_guttata
ENSCSAVG00000003299	-	94	64.418	ENSTRUG00000005496	cse1l	95	64.527	Takifugu_rubripes
ENSCSAVG00000003299	-	98	62.798	ENSTNIG00000014631	cse1l	98	62.902	Tetraodon_nigroviridis
ENSCSAVG00000003299	-	98	57.927	ENSTBEG00000008338	CSE1L	98	57.927	Tupaia_belangeri
ENSCSAVG00000003299	-	90	60.169	ENSTTRG00000004279	CSE1L	90	60.886	Tursiops_truncatus
ENSCSAVG00000003299	-	98	62.383	ENSUAMG00000025448	CSE1L	98	62.383	Ursus_americanus
ENSCSAVG00000003299	-	98	62.383	ENSUMAG00000024476	CSE1L	98	62.383	Ursus_maritimus
ENSCSAVG00000003299	-	98	60.725	ENSVPAG00000001312	CSE1L	98	60.725	Vicugna_pacos
ENSCSAVG00000003299	-	98	62.591	ENSVVUG00000022322	CSE1L	98	62.591	Vulpes_vulpes
ENSCSAVG00000003299	-	98	61.865	ENSXETG00000001784	cse1l	98	61.865	Xenopus_tropicalis
ENSCSAVG00000003299	-	98	56.580	ENSXCOG00000000805	cse1l	98	57.538	Xiphophorus_couchianus
ENSCSAVG00000003299	-	98	62.176	ENSXMAG00000001306	cse1l	98	62.694	Xiphophorus_maculatus