EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2185 bases
Position: chrreftig_558:23274-25458
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005567	RRM_1	PF00076.22	8.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005641	-	1050	-	ENSCSAVP00000005567	248 (aa)	-	H2YJR8

Gene Model

Click here to download ENSCSAVG00000003324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003324	-	99	47.510	ENSAPOG00000000183	-	98	47.510	Acanthochromis_polyacanthus
ENSCSAVG00000003324	-	99	40.590	ENSACIG00000020351	-	99	43.066	Amphilophus_citrinellus
ENSCSAVG00000003324	-	98	43.704	ENSACIG00000006351	alyref	97	45.091	Amphilophus_citrinellus
ENSCSAVG00000003324	-	99	47.451	ENSAOCG00000019305	-	98	45.455	Amphiprion_ocellaris
ENSCSAVG00000003324	-	99	43.590	ENSAOCG00000014012	alyref	99	45.255	Amphiprion_ocellaris
ENSCSAVG00000003324	-	99	44.828	ENSAPEG00000013527	-	98	45.455	Amphiprion_percula
ENSCSAVG00000003324	-	99	43.590	ENSAPEG00000014603	alyref	99	45.255	Amphiprion_percula
ENSCSAVG00000003324	-	99	43.728	ENSATEG00000004307	alyref	99	45.583	Anabas_testudineus
ENSCSAVG00000003324	-	98	45.385	ENSATEG00000000382	-	98	44.314	Anabas_testudineus
ENSCSAVG00000003324	-	50	53.237	ENSAPLG00000014745	-	97	54.478	Anas_platyrhynchos
ENSCSAVG00000003324	-	99	41.241	ENSACLG00000008432	alyref	99	43.682	Astatotilapia_calliptera
ENSCSAVG00000003324	-	98	44.444	ENSACLG00000010184	-	98	43.396	Astatotilapia_calliptera
ENSCSAVG00000003324	-	71	56.566	ENSAMXG00000007359	alyref	99	49.640	Astyanax_mexicanus
ENSCSAVG00000003324	-	100	70.611	ENSCING00000013568	-	100	74.809	Ciona_intestinalis
ENSCSAVG00000003324	-	99	42.435	ENSCSEG00000017800	alyref	99	45.353	Cynoglossus_semilaevis
ENSCSAVG00000003324	-	99	42.000	ENSCVAG00000007789	-	98	38.976	Cyprinodon_variegatus
ENSCSAVG00000003324	-	99	43.123	ENSCVAG00000014869	alyref	99	43.333	Cyprinodon_variegatus
ENSCSAVG00000003324	-	99	42.808	ENSDARG00000077732	alyref	99	43.110	Danio_rerio
ENSCSAVG00000003324	-	99	43.273	FBgn0010774	Ref1	99	36.264	Drosophila_melanogaster
ENSCSAVG00000003324	-	99	35.606	ENSEBUG00000006305	alyref	99	38.783	Eptatretus_burgeri
ENSCSAVG00000003324	-	99	45.525	ENSEBUG00000008253	alyref	66	49.721	Eptatretus_burgeri
ENSCSAVG00000003324	-	99	45.907	ENSELUG00000017178	alyref	99	48.897	Esox_lucius
ENSCSAVG00000003324	-	99	45.818	ENSELUG00000008849	-	99	46.909	Esox_lucius
ENSCSAVG00000003324	-	57	56.051	ENSFALG00000011923	-	94	55.921	Ficedula_albicollis
ENSCSAVG00000003324	-	99	45.149	ENSFHEG00000019426	alyref	99	46.691	Fundulus_heteroclitus
ENSCSAVG00000003324	-	99	43.200	ENSFHEG00000004698	-	98	42.578	Fundulus_heteroclitus
ENSCSAVG00000003324	-	99	44.364	ENSGMOG00000009882	alyref	99	44.118	Gadus_morhua
ENSCSAVG00000003324	-	70	42.512	ENSGMOG00000013122	-	99	48.705	Gadus_morhua
ENSCSAVG00000003324	-	99	41.200	ENSGAFG00000007573	-	98	41.797	Gambusia_affinis
ENSCSAVG00000003324	-	99	45.956	ENSGAFG00000006014	alyref	99	48.339	Gambusia_affinis
ENSCSAVG00000003324	-	98	43.019	ENSHBUG00000001454	-	98	44.569	Haplochromis_burtoni
ENSCSAVG00000003324	-	99	41.241	ENSHBUG00000020196	alyref	99	43.682	Haplochromis_burtoni
ENSCSAVG00000003324	-	98	44.358	ENSHCOG00000012825	-	64	46.369	Hippocampus_comes
ENSCSAVG00000003324	-	98	44.765	ENSIPUG00000009469	alyref	99	47.253	Ictalurus_punctatus
ENSCSAVG00000003324	-	78	48.705	ENSSTOG00000016570	-	90	52.273	Ictidomys_tridecemlineatus
ENSCSAVG00000003324	-	99	48.207	ENSKMAG00000006462	-	98	46.640	Kryptolebias_marmoratus
ENSCSAVG00000003324	-	99	42.958	ENSKMAG00000008912	alyref	99	45.091	Kryptolebias_marmoratus
ENSCSAVG00000003324	-	99	44.358	ENSLBEG00000012930	-	99	44.747	Labrus_bergylta
ENSCSAVG00000003324	-	98	46.800	ENSLBEG00000023118	alyref	90	44.245	Labrus_bergylta
ENSCSAVG00000003324	-	99	43.165	ENSLBEG00000005387	-	65	49.189	Labrus_bergylta
ENSCSAVG00000003324	-	58	48.824	ENSLOCG00000013879	alyref	70	48.352	Lepisosteus_oculatus
ENSCSAVG00000003324	-	99	42.456	ENSMAMG00000003034	alyref	99	45.620	Mastacembelus_armatus
ENSCSAVG00000003324	-	99	43.411	ENSMAMG00000005464	-	98	41.762	Mastacembelus_armatus
ENSCSAVG00000003324	-	99	41.241	ENSMZEG00005008639	alyref	99	43.682	Maylandia_zebra
ENSCSAVG00000003324	-	98	44.444	ENSMZEG00005012096	-	98	43.396	Maylandia_zebra
ENSCSAVG00000003324	-	98	44.000	ENSMMOG00000012458	alyref	96	46.296	Mola_mola
ENSCSAVG00000003324	-	99	43.426	ENSMMOG00000007032	-	71	46.154	Mola_mola
ENSCSAVG00000003324	-	99	45.255	ENSMALG00000006054	-	98	43.446	Monopterus_albus
ENSCSAVG00000003324	-	98	38.489	ENSMLUG00000009247	-	70	45.128	Myotis_lucifugus
ENSCSAVG00000003324	-	72	46.597	ENSMLUG00000028605	-	66	46.842	Myotis_lucifugus
ENSCSAVG00000003324	-	98	43.333	ENSMLUG00000022178	-	68	45.128	Myotis_lucifugus
ENSCSAVG00000003324	-	98	43.173	ENSMLUG00000030671	-	66	47.568	Myotis_lucifugus
ENSCSAVG00000003324	-	99	41.852	ENSMLUG00000006521	-	99	41.852	Myotis_lucifugus
ENSCSAVG00000003324	-	99	41.455	ENSMLUG00000014372	-	99	43.071	Myotis_lucifugus
ENSCSAVG00000003324	-	99	43.911	ENSMLUG00000004098	-	99	44.061	Myotis_lucifugus
ENSCSAVG00000003324	-	99	46.947	ENSNGAG00000022014	-	99	48.583	Nannospalax_galili
ENSCSAVG00000003324	-	99	44.737	ENSNBRG00000017460	-	99	44.528	Neolamprologus_brichardi
ENSCSAVG00000003324	-	99	42.029	ENSNBRG00000001747	alyref	99	45.161	Neolamprologus_brichardi
ENSCSAVG00000003324	-	98	42.692	ENSONIG00000003296	-	68	49.451	Oreochromis_niloticus
ENSCSAVG00000003324	-	99	42.652	ENSONIG00000019434	alyref	99	44.643	Oreochromis_niloticus
ENSCSAVG00000003324	-	70	47.753	ENSORLG00000001620	-	51	46.629	Oryzias_latipes
ENSCSAVG00000003324	-	99	42.804	ENSORLG00020011942	alyref	99	45.588	Oryzias_latipes_hni
ENSCSAVG00000003324	-	99	43.023	ENSORLG00020015673	-	98	42.248	Oryzias_latipes_hni
ENSCSAVG00000003324	-	99	43.123	ENSORLG00015022664	alyref	99	45.185	Oryzias_latipes_hsok
ENSCSAVG00000003324	-	99	43.798	ENSORLG00015015143	-	98	43.023	Oryzias_latipes_hsok
ENSCSAVG00000003324	-	99	41.935	ENSOMEG00000019176	alyref	99	42.652	Oryzias_melastigma
ENSCSAVG00000003324	-	99	44.186	ENSOMEG00000007158	-	97	42.636	Oryzias_melastigma
ENSCSAVG00000003324	-	88	44.958	ENSPPAG00000036403	-	71	47.090	Pan_paniscus
ENSCSAVG00000003324	-	99	45.620	ENSPKIG00000007070	alyref	99	49.425	Paramormyrops_kingsleyae
ENSCSAVG00000003324	-	98	46.538	ENSPKIG00000006233	-	80	48.855	Paramormyrops_kingsleyae
ENSCSAVG00000003324	-	68	45.882	ENSPMGG00000012994	-	93	42.941	Periophthalmus_magnuspinnatus
ENSCSAVG00000003324	-	98	43.019	ENSPMGG00000016600	alyref	90	46.816	Periophthalmus_magnuspinnatus
ENSCSAVG00000003324	-	99	44.882	ENSPEMG00000016628	-	99	47.368	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003324	-	99	42.292	ENSPFOG00000017094	-	98	41.860	Poecilia_formosa
ENSCSAVG00000003324	-	99	42.279	ENSPFOG00000022825	alyref	98	45.725	Poecilia_formosa
ENSCSAVG00000003324	-	99	42.292	ENSPLAG00000014380	-	98	41.860	Poecilia_latipinna
ENSCSAVG00000003324	-	99	42.435	ENSPLAG00000006948	alyref	99	47.015	Poecilia_latipinna
ENSCSAVG00000003324	-	99	42.279	ENSPMEG00000003547	alyref	99	45.725	Poecilia_mexicana
ENSCSAVG00000003324	-	99	42.292	ENSPMEG00000023039	-	98	41.860	Poecilia_mexicana
ENSCSAVG00000003324	-	99	40.392	ENSPREG00000003649	-	99	40.304	Poecilia_reticulata
ENSCSAVG00000003324	-	99	43.173	ENSPREG00000015795	alyref	99	45.956	Poecilia_reticulata
ENSCSAVG00000003324	-	99	41.241	ENSPNYG00000017498	alyref	99	43.682	Pundamilia_nyererei
ENSCSAVG00000003324	-	98	40.613	ENSPNYG00000002879	-	68	45.652	Pundamilia_nyererei
ENSCSAVG00000003324	-	99	43.011	ENSPNAG00000002531	alyref	99	44.891	Pygocentrus_nattereri
ENSCSAVG00000003324	-	84	48.246	ENSSBOG00000030924	-	82	49.451	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003324	-	99	40.511	ENSSHAG00000000609	-	99	38.710	Sarcophilus_harrisii
ENSCSAVG00000003324	-	99	40.530	ENSSHAG00000012866	-	99	35.907	Sarcophilus_harrisii
ENSCSAVG00000003324	-	77	47.143	ENSSFOG00015003923	alyref	69	49.215	Scleropages_formosus
ENSCSAVG00000003324	-	71	50.259	ENSSFOG00015003678	alyref	84	48.148	Scleropages_formosus
ENSCSAVG00000003324	-	99	41.852	ENSSMAG00000011169	-	92	48.588	Scophthalmus_maximus
ENSCSAVG00000003324	-	99	42.336	ENSSMAG00000009283	alyref	99	44.727	Scophthalmus_maximus
ENSCSAVG00000003324	-	99	42.857	ENSSDUG00000016158	alyref	99	44.161	Seriola_dumerili
ENSCSAVG00000003324	-	99	43.066	ENSSLDG00000017803	alyref	99	44.000	Seriola_lalandi_dorsalis
ENSCSAVG00000003324	-	99	49.035	ENSSPAG00000017028	-	96	47.909	Stegastes_partitus
ENSCSAVG00000003324	-	99	44.061	ENSTRUG00000003051	-	99	41.762	Takifugu_rubripes
ENSCSAVG00000003324	-	99	43.431	ENSTNIG00000011595	alyref	99	40.977	Tetraodon_nigroviridis
ENSCSAVG00000003324	-	99	46.640	ENSTNIG00000014136	-	99	41.036	Tetraodon_nigroviridis
ENSCSAVG00000003324	-	75	47.030	ENSVVUG00000000272	-	80	52.486	Vulpes_vulpes
ENSCSAVG00000003324	-	98	46.067	ENSXCOG00000018047	alyref	98	48.148	Xiphophorus_couchianus
ENSCSAVG00000003324	-	99	43.200	ENSXMAG00000018086	-	99	41.961	Xiphophorus_maculatus
ENSCSAVG00000003324	-	98	46.067	ENSXMAG00000012218	alyref	98	48.148	Xiphophorus_maculatus