EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003332 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 14200 bases
Position: chrreftig_122:463589-477788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005574	Nrap	PF03813.14	5.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005649	-	3246	-	ENSCSAVP00000005574	1071 (aa)	-	H2YJS5

Gene Model

Click here to download ENSCSAVG00000003332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003332	-	100	38.031	ENSG00000165271	NOL6	100	35.577	Homo_sapiens
ENSCSAVG00000003332	-	99	35.610	ENSAPOG00000002135	nol6	95	35.610	Acanthochromis_polyacanthus
ENSCSAVG00000003332	-	100	38.302	ENSAMEG00000007364	NOL6	94	38.302	Ailuropoda_melanoleuca
ENSCSAVG00000003332	-	99	35.695	ENSACIG00000018888	nol6	96	35.695	Amphilophus_citrinellus
ENSCSAVG00000003332	-	84	36.126	ENSAOCG00000002591	NOL6	94	36.560	Amphiprion_ocellaris
ENSCSAVG00000003332	-	99	34.731	ENSAOCG00000006894	nol6	96	34.731	Amphiprion_ocellaris
ENSCSAVG00000003332	-	99	35.558	ENSAPEG00000017733	nol6	99	35.558	Amphiprion_percula
ENSCSAVG00000003332	-	97	35.305	ENSATEG00000003713	nol6	96	35.305	Anabas_testudineus
ENSCSAVG00000003332	-	97	37.825	ENSAPLG00000003837	NOL6	100	37.825	Anas_platyrhynchos
ENSCSAVG00000003332	-	100	39.364	ENSACAG00000012749	-	96	39.364	Anolis_carolinensis
ENSCSAVG00000003332	-	100	37.975	ENSANAG00000019320	NOL6	97	37.975	Aotus_nancymaae
ENSCSAVG00000003332	-	99	35.779	ENSACLG00000006141	nol6	95	35.779	Astatotilapia_calliptera
ENSCSAVG00000003332	-	100	36.742	ENSAMXG00000007881	nol6	96	36.742	Astyanax_mexicanus
ENSCSAVG00000003332	-	100	39.024	ENSBTAG00000003323	NOL6	95	39.024	Bos_taurus
ENSCSAVG00000003332	-	100	37.875	ENSCJAG00000008222	NOL6	100	37.938	Callithrix_jacchus
ENSCSAVG00000003332	-	100	38.566	ENSCAFG00000001869	NOL6	95	38.566	Canis_familiaris
ENSCSAVG00000003332	-	100	38.566	ENSCAFG00020015767	NOL6	97	37.804	Canis_lupus_dingo
ENSCSAVG00000003332	-	100	38.934	ENSCHIG00000011813	NOL6	95	38.934	Capra_hircus
ENSCSAVG00000003332	-	100	38.783	ENSTSYG00000008125	NOL6	95	38.783	Carlito_syrichta
ENSCSAVG00000003332	-	100	35.942	ENSCAPG00000011587	NOL6	97	35.942	Cavia_aperea
ENSCSAVG00000003332	-	100	38.273	ENSCPOG00000012282	NOL6	95	38.510	Cavia_porcellus
ENSCSAVG00000003332	-	100	38.329	ENSCCAG00000022349	NOL6	95	38.329	Cebus_capucinus
ENSCSAVG00000003332	-	100	38.126	ENSCATG00000031690	NOL6	95	38.126	Cercocebus_atys
ENSCSAVG00000003332	-	91	38.162	ENSCLAG00000002096	NOL6	94	38.162	Chinchilla_lanigera
ENSCSAVG00000003332	-	100	38.022	ENSCSAG00000009990	NOL6	95	38.022	Chlorocebus_sabaeus
ENSCSAVG00000003332	-	100	40.018	ENSCPBG00000005864	NOL6	95	40.018	Chrysemys_picta_bellii
ENSCSAVG00000003332	-	100	38.022	ENSCANG00000017993	NOL6	95	38.022	Colobus_angolensis_palliatus
ENSCSAVG00000003332	-	100	38.203	ENSCGRG00001020245	Nol6	96	38.203	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003332	-	92	37.356	ENSCGRG00000014588	Nol6	94	37.500	Cricetulus_griseus_crigri
ENSCSAVG00000003332	-	99	36.685	ENSCVAG00000019497	nol6	96	36.685	Cyprinodon_variegatus
ENSCSAVG00000003332	-	100	36.109	ENSDARG00000059711	nol6	95	36.109	Danio_rerio
ENSCSAVG00000003332	-	100	36.141	ENSDNOG00000003382	NOL6	94	36.141	Dasypus_novemcinctus
ENSCSAVG00000003332	-	100	38.587	ENSDORG00000006018	Nol6	95	38.587	Dipodomys_ordii
ENSCSAVG00000003332	-	98	30.644	FBgn0261286	Mat89Ba	88	30.644	Drosophila_melanogaster
ENSCSAVG00000003332	-	81	43.357	ENSETEG00000003875	NOL6	78	43.357	Echinops_telfairi
ENSCSAVG00000003332	-	100	38.663	ENSEASG00005004206	NOL6	95	38.663	Equus_asinus_asinus
ENSCSAVG00000003332	-	100	38.753	ENSECAG00000007914	NOL6	95	38.753	Equus_caballus
ENSCSAVG00000003332	-	100	36.413	ENSELUG00000017818	nol6	95	36.413	Esox_lucius
ENSCSAVG00000003332	-	100	38.663	ENSFCAG00000006677	NOL6	95	38.663	Felis_catus
ENSCSAVG00000003332	-	88	40.228	ENSFALG00000009997	NOL6	100	40.228	Ficedula_albicollis
ENSCSAVG00000003332	-	100	39.126	ENSFDAG00000009930	NOL6	95	39.126	Fukomys_damarensis
ENSCSAVG00000003332	-	99	35.708	ENSFHEG00000007788	nol6	95	35.708	Fundulus_heteroclitus
ENSCSAVG00000003332	-	99	35.675	ENSGMOG00000000637	nol6	96	35.675	Gadus_morhua
ENSCSAVG00000003332	-	100	38.924	ENSGALG00000030730	NOL6	96	38.924	Gallus_gallus
ENSCSAVG00000003332	-	99	35.481	ENSGAFG00000009378	nol6	95	35.481	Gambusia_affinis
ENSCSAVG00000003332	-	99	35.369	ENSGACG00000010296	nol6	97	35.369	Gasterosteus_aculeatus
ENSCSAVG00000003332	-	100	39.510	ENSGAGG00000019996	NOL6	97	39.510	Gopherus_agassizii
ENSCSAVG00000003332	-	100	38.113	ENSGGOG00000003997	NOL6	95	38.113	Gorilla_gorilla
ENSCSAVG00000003332	-	99	35.870	ENSHBUG00000010058	nol6	95	35.870	Haplochromis_burtoni
ENSCSAVG00000003332	-	100	38.616	ENSHGLG00000009478	NOL6	95	38.616	Heterocephalus_glaber_female
ENSCSAVG00000003332	-	100	38.616	ENSHGLG00100014962	NOL6	95	38.616	Heterocephalus_glaber_male
ENSCSAVG00000003332	-	99	34.324	ENSHCOG00000020017	nol6	98	34.324	Hippocampus_comes
ENSCSAVG00000003332	-	100	35.967	ENSIPUG00000018266	nol6	95	35.967	Ictalurus_punctatus
ENSCSAVG00000003332	-	100	39.020	ENSSTOG00000015854	NOL6	94	39.020	Ictidomys_tridecemlineatus
ENSCSAVG00000003332	-	100	37.613	ENSJJAG00000024225	Nol6	95	37.613	Jaculus_jaculus
ENSCSAVG00000003332	-	99	36.413	ENSKMAG00000004749	nol6	97	36.413	Kryptolebias_marmoratus
ENSCSAVG00000003332	-	99	35.009	ENSLBEG00000006902	nol6	96	35.009	Labrus_bergylta
ENSCSAVG00000003332	-	75	36.071	ENSLACG00000006368	NOL6	99	36.071	Latimeria_chalumnae
ENSCSAVG00000003332	-	100	34.529	ENSLOCG00000004991	nol6	97	34.529	Lepisosteus_oculatus
ENSCSAVG00000003332	-	100	38.113	ENSLAFG00000004990	NOL6	95	38.294	Loxodonta_africana
ENSCSAVG00000003332	-	100	38.022	ENSMFAG00000040117	NOL6	95	38.022	Macaca_fascicularis
ENSCSAVG00000003332	-	100	38.022	ENSMMUG00000000389	NOL6	97	38.022	Macaca_mulatta
ENSCSAVG00000003332	-	100	38.022	ENSMNEG00000040252	NOL6	95	38.022	Macaca_nemestrina
ENSCSAVG00000003332	-	100	38.022	ENSMLEG00000043468	NOL6	95	38.022	Mandrillus_leucophaeus
ENSCSAVG00000003332	-	100	35.928	ENSMAMG00000011484	nol6	96	35.928	Mastacembelus_armatus
ENSCSAVG00000003332	-	99	35.779	ENSMZEG00005014058	nol6	95	35.779	Maylandia_zebra
ENSCSAVG00000003332	-	77	55.556	ENSMGAG00000016978	NOL6	83	55.556	Meleagris_gallopavo
ENSCSAVG00000003332	-	65	39.306	ENSMAUG00000010790	Nol6	100	39.306	Mesocricetus_auratus
ENSCSAVG00000003332	-	100	38.622	ENSMICG00000012157	NOL6	95	38.622	Microcebus_murinus
ENSCSAVG00000003332	-	100	38.678	ENSMOCG00000010981	Nol6	95	38.678	Microtus_ochrogaster
ENSCSAVG00000003332	-	99	35.727	ENSMMOG00000005625	nol6	96	35.545	Mola_mola
ENSCSAVG00000003332	-	100	38.960	ENSMODG00000003802	NOL6	93	38.960	Monodelphis_domestica
ENSCSAVG00000003332	-	99	36.116	ENSMALG00000009130	nol6	96	36.116	Monopterus_albus
ENSCSAVG00000003332	-	100	36.919	MGP_CAROLIEiJ_G0025907	Nol6	95	36.919	Mus_caroli
ENSCSAVG00000003332	-	100	37.192	ENSMUSG00000028430	Nol6	95	37.192	Mus_musculus
ENSCSAVG00000003332	-	100	37.284	MGP_PahariEiJ_G0024030	Nol6	95	37.284	Mus_pahari
ENSCSAVG00000003332	-	100	37.101	MGP_SPRETEiJ_G0026855	Nol6	95	37.101	Mus_spretus
ENSCSAVG00000003332	-	100	36.528	ENSMPUG00000003922	NOL6	94	36.528	Mustela_putorius_furo
ENSCSAVG00000003332	-	100	38.198	ENSMLUG00000003230	NOL6	94	38.198	Myotis_lucifugus
ENSCSAVG00000003332	-	100	38.113	ENSNGAG00000017803	Nol6	94	38.217	Nannospalax_galili
ENSCSAVG00000003332	-	99	35.960	ENSNBRG00000001435	nol6	95	35.960	Neolamprologus_brichardi
ENSCSAVG00000003332	-	100	37.365	ENSNLEG00000005056	NOL6	95	37.545	Nomascus_leucogenys
ENSCSAVG00000003332	-	100	37.534	ENSMEUG00000004232	NOL6	97	37.534	Notamacropus_eugenii
ENSCSAVG00000003332	-	100	36.823	ENSOPRG00000016817	NOL6	97	37.004	Ochotona_princeps
ENSCSAVG00000003332	-	100	38.803	ENSODEG00000015856	NOL6	94	38.803	Octodon_degus
ENSCSAVG00000003332	-	99	35.779	ENSONIG00000015951	nol6	95	35.779	Oreochromis_niloticus
ENSCSAVG00000003332	-	80	32.396	ENSOANG00000010217	-	93	32.360	Ornithorhynchus_anatinus
ENSCSAVG00000003332	-	100	37.693	ENSOCUG00000026918	NOL6	94	37.693	Oryctolagus_cuniculus
ENSCSAVG00000003332	-	99	36.141	ENSORLG00000010159	nol6	96	36.141	Oryzias_latipes
ENSCSAVG00000003332	-	99	36.141	ENSORLG00015023273	nol6	96	36.141	Oryzias_latipes_hsok
ENSCSAVG00000003332	-	99	36.124	ENSOMEG00000006877	nol6	96	36.124	Oryzias_melastigma
ENSCSAVG00000003332	-	100	38.517	ENSOGAG00000014354	NOL6	95	38.517	Otolemur_garnettii
ENSCSAVG00000003332	-	100	38.814	ENSOARG00000009424	NOL6	95	38.814	Ovis_aries
ENSCSAVG00000003332	-	100	38.203	ENSPPAG00000040840	NOL6	95	37.984	Pan_paniscus
ENSCSAVG00000003332	-	100	38.663	ENSPPRG00000003583	NOL6	95	38.663	Panthera_pardus
ENSCSAVG00000003332	-	100	38.753	ENSPTIG00000002752	NOL6	95	38.753	Panthera_tigris_altaica
ENSCSAVG00000003332	-	100	38.203	ENSPTRG00000020861	NOL6	95	37.940	Pan_troglodytes
ENSCSAVG00000003332	-	100	37.931	ENSPANG00000025310	NOL6	95	37.931	Papio_anubis
ENSCSAVG00000003332	-	100	37.094	ENSPKIG00000011418	nol6	96	37.094	Paramormyrops_kingsleyae
ENSCSAVG00000003332	-	100	37.750	ENSPSIG00000014763	NOL6	95	37.931	Pelodiscus_sinensis
ENSCSAVG00000003332	-	99	35.832	ENSPMGG00000015119	nol6	99	35.832	Periophthalmus_magnuspinnatus
ENSCSAVG00000003332	-	100	38.251	ENSPEMG00000011998	Nol6	95	38.251	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003332	-	100	38.889	ENSPCIG00000029061	NOL6	97	38.889	Phascolarctos_cinereus
ENSCSAVG00000003332	-	99	35.870	ENSPFOG00000003825	nol6	95	35.870	Poecilia_formosa
ENSCSAVG00000003332	-	99	35.870	ENSPLAG00000001410	nol6	95	35.870	Poecilia_latipinna
ENSCSAVG00000003332	-	99	35.870	ENSPMEG00000021561	nol6	95	35.870	Poecilia_mexicana
ENSCSAVG00000003332	-	99	35.507	ENSPREG00000004807	nol6	95	35.507	Poecilia_reticulata
ENSCSAVG00000003332	-	100	37.919	ENSPPYG00000019133	NOL6	95	37.919	Pongo_abelii
ENSCSAVG00000003332	-	100	38.622	ENSPCOG00000019262	NOL6	95	38.622	Propithecus_coquereli
ENSCSAVG00000003332	-	100	36.766	ENSPVAG00000011487	NOL6	95	36.766	Pteropus_vampyrus
ENSCSAVG00000003332	-	99	35.876	ENSPNYG00000020726	nol6	96	35.779	Pundamilia_nyererei
ENSCSAVG00000003332	-	100	35.974	ENSPNAG00000028102	nol6	96	35.974	Pygocentrus_nattereri
ENSCSAVG00000003332	-	100	37.192	ENSRNOG00000010409	Nol6	95	37.375	Rattus_norvegicus
ENSCSAVG00000003332	-	100	35.978	ENSRBIG00000016646	NOL6	95	36.159	Rhinopithecus_bieti
ENSCSAVG00000003332	-	100	37.840	ENSRROG00000039046	NOL6	95	37.840	Rhinopithecus_roxellana
ENSCSAVG00000003332	-	100	37.965	ENSSBOG00000029525	NOL6	97	37.965	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003332	-	100	38.894	ENSSHAG00000004050	NOL6	95	38.894	Sarcophilus_harrisii
ENSCSAVG00000003332	-	100	35.851	ENSSFOG00015016052	nol6	95	35.851	Scleropages_formosus
ENSCSAVG00000003332	-	100	35.760	ENSSMAG00000008757	nol6	96	35.760	Scophthalmus_maximus
ENSCSAVG00000003332	-	99	35.364	ENSSDUG00000016772	nol6	95	35.455	Seriola_dumerili
ENSCSAVG00000003332	-	99	35.369	ENSSLDG00000017046	nol6	95	35.460	Seriola_lalandi_dorsalis
ENSCSAVG00000003332	-	87	38.268	ENSSARG00000010381	NOL6	83	38.500	Sorex_araneus
ENSCSAVG00000003332	-	100	39.781	ENSSPUG00000008506	NOL6	95	39.781	Sphenodon_punctatus
ENSCSAVG00000003332	-	99	35.610	ENSSPAG00000005542	nol6	96	35.610	Stegastes_partitus
ENSCSAVG00000003332	-	100	38.934	ENSSSCG00000010990	NOL6	95	38.934	Sus_scrofa
ENSCSAVG00000003332	-	100	39.745	ENSTGUG00000001674	NOL6	99	39.745	Taeniopygia_guttata
ENSCSAVG00000003332	-	99	36.265	ENSTRUG00000005694	nol6	96	36.265	Takifugu_rubripes
ENSCSAVG00000003332	-	99	36.727	ENSTNIG00000003826	nol6	97	36.727	Tetraodon_nigroviridis
ENSCSAVG00000003332	-	88	35.818	ENSTBEG00000003239	NOL6	85	35.818	Tupaia_belangeri
ENSCSAVG00000003332	-	90	40.233	ENSTTRG00000010584	NOL6	87	40.233	Tursiops_truncatus
ENSCSAVG00000003332	-	100	38.211	ENSUAMG00000025594	NOL6	96	37.750	Ursus_americanus
ENSCSAVG00000003332	-	100	38.302	ENSUMAG00000006051	NOL6	95	38.302	Ursus_maritimus
ENSCSAVG00000003332	-	100	38.838	ENSVVUG00000021087	NOL6	94	39.471	Vulpes_vulpes
ENSCSAVG00000003332	-	100	39.099	ENSXETG00000002153	nol6	95	39.386	Xenopus_tropicalis
ENSCSAVG00000003332	-	99	35.688	ENSXMAG00000019408	nol6	95	35.688	Xiphophorus_maculatus