EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003416 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6163 bases
Position: chrreftig_3:768960-775122
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005736	eIF2A	PF08662.11	1.4e-10	1	1
ENSCSAVP00000005735	eIF2A	PF08662.11	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005810	-	866	-	ENSCSAVP00000005735	285 (aa)	-	H2YK83
ENSCSAVT00000005811	-	1128	-	ENSCSAVP00000005736	376 (aa)	-	H2YK84
ENSCSAVT00000005809	-	1181	-	ENSCSAVP00000005734	298 (aa)	-	H2YK82
ENSCSAVT00000005812	-	912	-	ENSCSAVP00000005737	304 (aa)	-	H2YK85

Gene Model

Click here to download ENSCSAVG00000003416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003416	-	81	31.126	ENSCSAVG00000003355	-	99	31.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003416	-	99	79.597	ENSCING00000022015	-	99	81.612	Ciona_intestinalis