EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003437 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8497 bases
Position: chrreftig_21:509287-517783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005762	Clp1	PF06807.14	1.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005837	-	1645	-	ENSCSAVP00000005762	425 (aa)	-	H2YKB0

Gene Model

Click here to download ENSCSAVG00000003437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003437	-	99	63.270	ENSG00000172409	CLP1	99	63.270	Homo_sapiens
ENSCSAVG00000003437	-	96	62.919	ENSAPOG00000008242	clp1	95	62.919	Acanthochromis_polyacanthus
ENSCSAVG00000003437	-	99	63.033	ENSAMEG00000014551	CLP1	97	63.033	Ailuropoda_melanoleuca
ENSCSAVG00000003437	-	96	63.158	ENSACIG00000006310	clp1	94	63.158	Amphilophus_citrinellus
ENSCSAVG00000003437	-	97	62.470	ENSAOCG00000010681	clp1	98	62.470	Amphiprion_ocellaris
ENSCSAVG00000003437	-	96	62.919	ENSAPEG00000012165	clp1	97	62.919	Amphiprion_percula
ENSCSAVG00000003437	-	99	61.485	ENSATEG00000012374	clp1	98	61.485	Anabas_testudineus
ENSCSAVG00000003437	-	99	63.357	ENSACAG00000007139	CLP1	99	63.357	Anolis_carolinensis
ENSCSAVG00000003437	-	99	63.270	ENSANAG00000034935	CLP1	99	63.270	Aotus_nancymaae
ENSCSAVG00000003437	-	96	62.919	ENSACLG00000013573	clp1	95	62.919	Astatotilapia_calliptera
ENSCSAVG00000003437	-	96	61.244	ENSAMXG00000014194	clp1	97	61.244	Astyanax_mexicanus
ENSCSAVG00000003437	-	99	63.033	ENSBTAG00000006493	CLP1	99	63.033	Bos_taurus
ENSCSAVG00000003437	-	97	47.733	WBGene00010304	clpf-1	98	47.733	Caenorhabditis_elegans
ENSCSAVG00000003437	-	99	63.270	ENSCJAG00000008748	CLP1	99	63.270	Callithrix_jacchus
ENSCSAVG00000003437	-	99	63.033	ENSCAFG00000007815	CLP1	99	63.033	Canis_familiaris
ENSCSAVG00000003437	-	99	63.033	ENSCAFG00020000903	CLP1	99	63.033	Canis_lupus_dingo
ENSCSAVG00000003437	-	99	62.796	ENSCHIG00000023497	CLP1	99	62.796	Capra_hircus
ENSCSAVG00000003437	-	99	63.507	ENSTSYG00000006824	CLP1	98	63.507	Carlito_syrichta
ENSCSAVG00000003437	-	99	63.357	ENSCAPG00000009703	CLP1	99	63.357	Cavia_aperea
ENSCSAVG00000003437	-	96	64.390	ENSCPOG00000012554	CLP1	98	64.390	Cavia_porcellus
ENSCSAVG00000003437	-	99	63.270	ENSCCAG00000031957	CLP1	99	63.270	Cebus_capucinus
ENSCSAVG00000003437	-	99	63.270	ENSCATG00000044628	CLP1	99	63.270	Cercocebus_atys
ENSCSAVG00000003437	-	99	63.270	ENSCLAG00000004094	CLP1	99	63.270	Chinchilla_lanigera
ENSCSAVG00000003437	-	99	63.270	ENSCSAG00000005994	CLP1	99	63.270	Chlorocebus_sabaeus
ENSCSAVG00000003437	-	99	63.121	ENSCPBG00000016843	CLP1	99	63.121	Chrysemys_picta_bellii
ENSCSAVG00000003437	-	100	88.471	ENSCING00000003779	-	99	88.471	Ciona_intestinalis
ENSCSAVG00000003437	-	99	63.270	ENSCANG00000034335	CLP1	99	63.270	Colobus_angolensis_palliatus
ENSCSAVG00000003437	-	99	62.884	ENSCGRG00001002227	CLP1	99	62.884	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003437	-	99	62.884	ENSCGRG00000004328	CLP1	99	62.884	Cricetulus_griseus_crigri
ENSCSAVG00000003437	-	97	61.848	ENSCSEG00000008614	clp1	96	61.848	Cynoglossus_semilaevis
ENSCSAVG00000003437	-	99	61.717	ENSCVAG00000020101	clp1	98	61.717	Cyprinodon_variegatus
ENSCSAVG00000003437	-	96	62.019	ENSDARG00000063663	clp1	94	62.019	Danio_rerio
ENSCSAVG00000003437	-	99	63.033	ENSDNOG00000042415	CLP1	89	63.033	Dasypus_novemcinctus
ENSCSAVG00000003437	-	99	63.033	ENSDORG00000014685	Clp1	99	63.033	Dipodomys_ordii
ENSCSAVG00000003437	-	99	52.693	FBgn0033842	cbc	99	52.693	Drosophila_melanogaster
ENSCSAVG00000003437	-	99	63.270	ENSETEG00000003009	CLP1	99	63.270	Echinops_telfairi
ENSCSAVG00000003437	-	97	59.420	ENSEBUG00000011648	clp1	97	59.420	Eptatretus_burgeri
ENSCSAVG00000003437	-	99	63.270	ENSEASG00005002093	CLP1	99	63.270	Equus_asinus_asinus
ENSCSAVG00000003437	-	99	63.270	ENSECAG00000011597	CLP1	99	63.270	Equus_caballus
ENSCSAVG00000003437	-	99	63.033	ENSEEUG00000012771	CLP1	99	63.033	Erinaceus_europaeus
ENSCSAVG00000003437	-	96	63.636	ENSELUG00000024048	clp1	94	63.636	Esox_lucius
ENSCSAVG00000003437	-	99	63.033	ENSFCAG00000006633	CLP1	99	63.033	Felis_catus
ENSCSAVG00000003437	-	99	61.939	ENSFALG00000011145	CLP1	99	61.939	Ficedula_albicollis
ENSCSAVG00000003437	-	99	63.270	ENSFDAG00000000234	CLP1	99	63.270	Fukomys_damarensis
ENSCSAVG00000003437	-	99	61.253	ENSFHEG00000014760	CLP1	98	61.253	Fundulus_heteroclitus
ENSCSAVG00000003437	-	96	64.337	ENSGMOG00000019340	clp1	95	64.337	Gadus_morhua
ENSCSAVG00000003437	-	99	62.648	ENSGALG00000007370	CLP1	99	62.648	Gallus_gallus
ENSCSAVG00000003437	-	99	60.789	ENSGAFG00000003020	clp1	99	60.789	Gambusia_affinis
ENSCSAVG00000003437	-	99	61.949	ENSGACG00000017832	clp1	98	61.949	Gasterosteus_aculeatus
ENSCSAVG00000003437	-	99	63.121	ENSGAGG00000013279	CLP1	99	63.121	Gopherus_agassizii
ENSCSAVG00000003437	-	99	63.270	ENSGGOG00000023006	CLP1	99	63.270	Gorilla_gorilla
ENSCSAVG00000003437	-	96	63.158	ENSHBUG00000010436	clp1	95	63.158	Haplochromis_burtoni
ENSCSAVG00000003437	-	99	63.270	ENSHGLG00000009914	CLP1	99	63.270	Heterocephalus_glaber_female
ENSCSAVG00000003437	-	99	63.270	ENSHGLG00100006105	CLP1	99	63.270	Heterocephalus_glaber_male
ENSCSAVG00000003437	-	96	63.309	ENSHCOG00000010072	clp1	95	63.309	Hippocampus_comes
ENSCSAVG00000003437	-	96	61.722	ENSIPUG00000016238	clp1	93	61.722	Ictalurus_punctatus
ENSCSAVG00000003437	-	99	63.033	ENSSTOG00000029257	CLP1	99	63.033	Ictidomys_tridecemlineatus
ENSCSAVG00000003437	-	99	63.033	ENSJJAG00000023691	Clp1	99	63.033	Jaculus_jaculus
ENSCSAVG00000003437	-	99	60.789	ENSKMAG00000011990	clp1	98	60.789	Kryptolebias_marmoratus
ENSCSAVG00000003437	-	96	63.636	ENSLBEG00000010201	clp1	95	63.636	Labrus_bergylta
ENSCSAVG00000003437	-	96	64.634	ENSLACG00000003160	CLP1	97	64.634	Latimeria_chalumnae
ENSCSAVG00000003437	-	73	60.748	ENSLOCG00000008074	clp1	99	60.748	Lepisosteus_oculatus
ENSCSAVG00000003437	-	99	63.033	ENSLAFG00000014907	CLP1	99	63.033	Loxodonta_africana
ENSCSAVG00000003437	-	99	63.270	ENSMFAG00000046074	CLP1	99	63.270	Macaca_fascicularis
ENSCSAVG00000003437	-	99	63.270	ENSMMUG00000038007	CLP1	98	63.270	Macaca_mulatta
ENSCSAVG00000003437	-	99	63.270	ENSMNEG00000000259	CLP1	99	63.270	Macaca_nemestrina
ENSCSAVG00000003437	-	99	63.270	ENSMLEG00000043556	CLP1	99	63.270	Mandrillus_leucophaeus
ENSCSAVG00000003437	-	96	62.201	ENSMAMG00000002149	clp1	95	62.201	Mastacembelus_armatus
ENSCSAVG00000003437	-	96	62.919	ENSMZEG00005002850	clp1	95	62.919	Maylandia_zebra
ENSCSAVG00000003437	-	99	62.648	ENSMGAG00000009643	CLP1	99	62.648	Meleagris_gallopavo
ENSCSAVG00000003437	-	99	63.121	ENSMAUG00000016261	Clp1	99	63.121	Mesocricetus_auratus
ENSCSAVG00000003437	-	99	63.033	ENSMICG00000004895	CLP1	99	63.033	Microcebus_murinus
ENSCSAVG00000003437	-	99	63.121	ENSMOCG00000005498	Clp1	99	63.121	Microtus_ochrogaster
ENSCSAVG00000003437	-	96	62.201	ENSMMOG00000003229	clp1	95	62.201	Mola_mola
ENSCSAVG00000003437	-	99	62.411	ENSMODG00000024148	-	99	62.411	Monodelphis_domestica
ENSCSAVG00000003437	-	99	62.411	ENSMODG00000020107	-	99	62.411	Monodelphis_domestica
ENSCSAVG00000003437	-	96	62.679	ENSMALG00000014239	clp1	95	62.679	Monopterus_albus
ENSCSAVG00000003437	-	99	63.121	MGP_CAROLIEiJ_G0023726	Clp1	99	63.121	Mus_caroli
ENSCSAVG00000003437	-	99	63.121	ENSMUSG00000027079	Clp1	99	63.121	Mus_musculus
ENSCSAVG00000003437	-	99	63.121	MGP_PahariEiJ_G0025177	Clp1	99	63.121	Mus_pahari
ENSCSAVG00000003437	-	99	63.121	MGP_SPRETEiJ_G0024646	Clp1	99	63.121	Mus_spretus
ENSCSAVG00000003437	-	99	63.033	ENSMPUG00000000268	CLP1	99	63.033	Mustela_putorius_furo
ENSCSAVG00000003437	-	99	63.033	ENSMLUG00000007904	CLP1	99	63.033	Myotis_lucifugus
ENSCSAVG00000003437	-	99	63.033	ENSNGAG00000006165	Clp1	99	63.033	Nannospalax_galili
ENSCSAVG00000003437	-	96	62.919	ENSNBRG00000005225	clp1	95	62.919	Neolamprologus_brichardi
ENSCSAVG00000003437	-	78	62.869	ENSNLEG00000012809	-	99	62.869	Nomascus_leucogenys
ENSCSAVG00000003437	-	99	62.175	ENSMEUG00000010949	CLP1	99	62.175	Notamacropus_eugenii
ENSCSAVG00000003437	-	70	65.657	ENSOPRG00000007329	CLP1	99	65.657	Ochotona_princeps
ENSCSAVG00000003437	-	99	63.270	ENSODEG00000011410	CLP1	99	63.270	Octodon_degus
ENSCSAVG00000003437	-	96	62.679	ENSONIG00000005089	clp1	95	62.679	Oreochromis_niloticus
ENSCSAVG00000003437	-	99	63.033	ENSOCUG00000007045	CLP1	99	63.033	Oryctolagus_cuniculus
ENSCSAVG00000003437	-	96	62.201	ENSORLG00000003647	clp1	95	62.201	Oryzias_latipes
ENSCSAVG00000003437	-	96	61.962	ENSORLG00020016676	clp1	95	61.962	Oryzias_latipes_hni
ENSCSAVG00000003437	-	96	62.201	ENSORLG00015019484	clp1	95	62.201	Oryzias_latipes_hsok
ENSCSAVG00000003437	-	96	62.440	ENSOMEG00000021303	clp1	95	62.440	Oryzias_melastigma
ENSCSAVG00000003437	-	99	63.033	ENSOGAG00000004508	CLP1	99	63.033	Otolemur_garnettii
ENSCSAVG00000003437	-	99	61.611	ENSOARG00000010145	CLP1	98	61.611	Ovis_aries
ENSCSAVG00000003437	-	99	63.270	ENSPPAG00000041519	CLP1	99	63.270	Pan_paniscus
ENSCSAVG00000003437	-	99	63.033	ENSPPRG00000006135	CLP1	99	63.033	Panthera_pardus
ENSCSAVG00000003437	-	99	63.033	ENSPTIG00000015866	CLP1	99	63.033	Panthera_tigris_altaica
ENSCSAVG00000003437	-	99	63.270	ENSPTRG00000047318	CLP1	99	63.270	Pan_troglodytes
ENSCSAVG00000003437	-	99	63.270	ENSPANG00000017078	CLP1	97	63.270	Papio_anubis
ENSCSAVG00000003437	-	96	63.747	ENSPKIG00000007697	clp1	94	63.747	Paramormyrops_kingsleyae
ENSCSAVG00000003437	-	94	61.097	ENSPSIG00000005468	CLP1	99	61.097	Pelodiscus_sinensis
ENSCSAVG00000003437	-	96	62.679	ENSPMGG00000012171	clp1	95	62.679	Periophthalmus_magnuspinnatus
ENSCSAVG00000003437	-	99	63.121	ENSPEMG00000011213	-	99	63.121	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003437	-	99	60.142	ENSPMAG00000006707	clp1	99	60.142	Petromyzon_marinus
ENSCSAVG00000003437	-	99	62.411	ENSPCIG00000011899	CLP1	99	62.411	Phascolarctos_cinereus
ENSCSAVG00000003437	-	99	60.557	ENSPFOG00000008169	clp1	98	60.557	Poecilia_formosa
ENSCSAVG00000003437	-	99	60.557	ENSPLAG00000022388	clp1	98	60.557	Poecilia_latipinna
ENSCSAVG00000003437	-	99	60.557	ENSPMEG00000021088	clp1	98	60.557	Poecilia_mexicana
ENSCSAVG00000003437	-	99	60.789	ENSPREG00000017802	clp1	98	60.789	Poecilia_reticulata
ENSCSAVG00000003437	-	52	65.315	ENSPPYG00000003266	-	99	65.315	Pongo_abelii
ENSCSAVG00000003437	-	99	63.033	ENSPCOG00000000360	CLP1	98	63.033	Propithecus_coquereli
ENSCSAVG00000003437	-	99	63.033	ENSPVAG00000016270	CLP1	99	63.033	Pteropus_vampyrus
ENSCSAVG00000003437	-	96	63.158	ENSPNYG00000017274	clp1	94	63.158	Pundamilia_nyererei
ENSCSAVG00000003437	-	96	62.201	ENSPNAG00000026460	clp1	94	62.201	Pygocentrus_nattereri
ENSCSAVG00000003437	-	99	63.121	ENSRNOG00000007416	Clp1	99	63.121	Rattus_norvegicus
ENSCSAVG00000003437	-	99	63.270	ENSRBIG00000018191	CLP1	99	63.270	Rhinopithecus_bieti
ENSCSAVG00000003437	-	99	63.270	ENSRROG00000039265	CLP1	99	63.270	Rhinopithecus_roxellana
ENSCSAVG00000003437	-	95	50.123	ENSSBOG00000010558	-	93	50.123	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003437	-	99	63.270	ENSSBOG00000032517	-	99	63.270	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003437	-	99	62.411	ENSSHAG00000015695	CLP1	99	62.411	Sarcophilus_harrisii
ENSCSAVG00000003437	-	96	62.648	ENSSFOG00015000628	clp1	96	62.648	Scleropages_formosus
ENSCSAVG00000003437	-	96	62.679	ENSSMAG00000019423	clp1	94	62.679	Scophthalmus_maximus
ENSCSAVG00000003437	-	96	63.158	ENSSDUG00000014495	clp1	95	63.158	Seriola_dumerili
ENSCSAVG00000003437	-	96	63.158	ENSSLDG00000000937	clp1	95	63.158	Seriola_lalandi_dorsalis
ENSCSAVG00000003437	-	52	64.414	ENSSARG00000002459	CLP1	99	64.414	Sorex_araneus
ENSCSAVG00000003437	-	99	62.884	ENSSPUG00000016811	CLP1	99	62.884	Sphenodon_punctatus
ENSCSAVG00000003437	-	99	61.485	ENSSPAG00000016052	clp1	98	61.485	Stegastes_partitus
ENSCSAVG00000003437	-	99	63.033	ENSSSCG00000031442	CLP1	99	63.033	Sus_scrofa
ENSCSAVG00000003437	-	99	61.702	ENSTGUG00000007002	CLP1	99	61.702	Taeniopygia_guttata
ENSCSAVG00000003437	-	96	62.802	ENSTRUG00000012602	clp1	95	62.802	Takifugu_rubripes
ENSCSAVG00000003437	-	96	63.285	ENSTNIG00000013125	clp1	95	63.285	Tetraodon_nigroviridis
ENSCSAVG00000003437	-	99	62.796	ENSTBEG00000009975	CLP1	99	62.796	Tupaia_belangeri
ENSCSAVG00000003437	-	99	63.033	ENSTTRG00000002096	CLP1	99	63.033	Tursiops_truncatus
ENSCSAVG00000003437	-	99	63.033	ENSUAMG00000011388	CLP1	99	63.033	Ursus_americanus
ENSCSAVG00000003437	-	99	63.033	ENSUMAG00000018317	CLP1	99	63.033	Ursus_maritimus
ENSCSAVG00000003437	-	99	63.033	ENSVVUG00000017138	CLP1	96	63.033	Vulpes_vulpes
ENSCSAVG00000003437	-	96	59.709	ENSXETG00000007088	clp1	94	60.437	Xenopus_tropicalis
ENSCSAVG00000003437	-	99	60.557	ENSXCOG00000002287	clp1	98	60.557	Xiphophorus_couchianus
ENSCSAVG00000003437	-	99	60.557	ENSXMAG00000009783	clp1	98	60.557	Xiphophorus_maculatus