EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003440 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
10303 bases
Position
chrreftig_12:1357517-1367819
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005773RRM_5PF13893.68.4e-1012
ENSCSAVP00000005773RRM_5PF13893.68.4e-1022
ENSCSAVP00000005772RRM_5PF13893.69.1e-1012
ENSCSAVP00000005772RRM_5PF13893.69.1e-1022
ENSCSAVP00000005769RRM_5PF13893.69.8e-1012
ENSCSAVP00000005769RRM_5PF13893.69.8e-1022
ENSCSAVP00000005771RRM_5PF13893.61e-0912
ENSCSAVP00000005771RRM_5PF13893.61e-0922
ENSCSAVP00000005770RRM_5PF13893.61.1e-0912
ENSCSAVP00000005770RRM_5PF13893.61.1e-0922
ENSCSAVP00000005774RRM_5PF13893.61.4e-0912
ENSCSAVP00000005774RRM_5PF13893.61.4e-0922
ENSCSAVP00000005766RRM_5PF13893.69.3e-0911
ENSCSAVP00000005767RRM_5PF13893.61.1e-0811
ENSCSAVP00000005775RRM_5PF13893.67.7e-0811
ENSCSAVP00000005774RRM_1PF00076.221.4e-6313
ENSCSAVP00000005774RRM_1PF00076.221.4e-6323
ENSCSAVP00000005774RRM_1PF00076.221.4e-6333
ENSCSAVP00000005773RRM_1PF00076.221.5e-6313
ENSCSAVP00000005773RRM_1PF00076.221.5e-6323
ENSCSAVP00000005773RRM_1PF00076.221.5e-6333
ENSCSAVP00000005769RRM_1PF00076.222.5e-6313
ENSCSAVP00000005769RRM_1PF00076.222.5e-6323
ENSCSAVP00000005769RRM_1PF00076.222.5e-6333
ENSCSAVP00000005771RRM_1PF00076.222.5e-6313
ENSCSAVP00000005771RRM_1PF00076.222.5e-6323
ENSCSAVP00000005771RRM_1PF00076.222.5e-6333
ENSCSAVP00000005770RRM_1PF00076.222.9e-6313
ENSCSAVP00000005770RRM_1PF00076.222.9e-6323
ENSCSAVP00000005770RRM_1PF00076.222.9e-6333
ENSCSAVP00000005772RRM_1PF00076.223.7e-6313
ENSCSAVP00000005772RRM_1PF00076.223.7e-6323
ENSCSAVP00000005772RRM_1PF00076.223.7e-6333
ENSCSAVP00000005767RRM_1PF00076.221.7e-6013
ENSCSAVP00000005767RRM_1PF00076.221.7e-6023
ENSCSAVP00000005767RRM_1PF00076.221.7e-6033
ENSCSAVP00000005766RRM_1PF00076.221.8e-6013
ENSCSAVP00000005766RRM_1PF00076.221.8e-6023
ENSCSAVP00000005766RRM_1PF00076.221.8e-6033
ENSCSAVP00000005775RRM_1PF00076.221e-5914
ENSCSAVP00000005775RRM_1PF00076.221e-5924
ENSCSAVP00000005775RRM_1PF00076.221e-5934
ENSCSAVP00000005775RRM_1PF00076.221e-5944
ENSCSAVP00000005768RRM_1PF00076.221.7e-4112
ENSCSAVP00000005768RRM_1PF00076.221.7e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005847-1287-ENSCSAVP00000005772401 (aa)-H2YKC0
ENSCSAVT00000005846-1391-ENSCSAVP00000005771358 (aa)-H2YKB9
ENSCSAVT00000005845-1242-ENSCSAVP00000005770377 (aa)-H2YKB8
ENSCSAVT00000005844-1779-ENSCSAVP00000005769366 (aa)-H2YKB7
ENSCSAVT00000005843-2106-ENSCSAVP00000005768316 (aa)-H2YKB6
ENSCSAVT00000005842-1552-ENSCSAVP00000005767315 (aa)-H2YKB5
ENSCSAVT00000005841-1569-ENSCSAVP00000005766318 (aa)-H2YKB4
ENSCSAVT00000005849-951-ENSCSAVP00000005774317 (aa)-H2YKC2
ENSCSAVT00000005848-966-ENSCSAVP00000005773322 (aa)-H2YKC1
ENSCSAVT00000005850-987-ENSCSAVP00000005775329 (aa)-H2YKC3
Gene Model
Click here to download ENSCSAVG00000003440's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003440's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000003440-8040.000ENSCSAVG00000004539-5440.000
ENSCSAVG00000003440-9736.709ENSCSAVG00000007662-9636.709
ENSCSAVG00000003440-9433.333ENSCSAVG00000007809-9733.750
ENSCSAVG00000003440-5232.877ENSCSAVG00000005685-5932.877
ENSCSAVG00000003440-9936.585ENSCSAVG00000003102-9230.216
ENSCSAVG00000003440-9831.646ENSCSAVG00000004246-7236.923
ENSCSAVG00000003440-9847.929ENSCSAVG00000009321-7742.254
ENSCSAVG00000003440-9837.179ENSCSAVG00000007538-9837.179
ENSCSAVG00000003440-9837.313ENSCSAVG00000008860-5835.065
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003440-9966.773ENSG00000107105ELAVL210065.217Homo_sapiens
ENSCSAVG00000003440-9964.669ENSAPOG00000022121ELAVL28164.856Acanthochromis_polyacanthus
ENSCSAVG00000003440-10064.839ENSAMEG00000007555ELAVL28264.724Ailuropoda_melanoleuca
ENSCSAVG00000003440-9965.723ENSACIG00000010855ELAVL29665.924Amphilophus_citrinellus
ENSCSAVG00000003440-10064.194ENSAOCG00000019468ELAVL28264.194Amphiprion_ocellaris
ENSCSAVG00000003440-10064.194ENSAPEG00000023474ELAVL28264.194Amphiprion_percula
ENSCSAVG00000003440-10064.401ENSATEG00000018073ELAVL28964.923Anabas_testudineus
ENSCSAVG00000003440-9965.031ENSAPLG00000010429ELAVL28264.793Anas_platyrhynchos
ENSCSAVG00000003440-10064.516ENSACAG00000017521ELAVL27764.497Anolis_carolinensis
ENSCSAVG00000003440-9966.561ENSANAG00000032553ELAVL28664.923Aotus_nancymaae
ENSCSAVG00000003440-10064.194ENSACLG00000002715ELAVL28264.110Astatotilapia_calliptera
ENSCSAVG00000003440-9176.623ENSAMXG00000036990ELAVL28264.516Astyanax_mexicanus
ENSCSAVG00000003440-9966.773ENSBTAG00000046348ELAVL28866.773Bos_taurus
ENSCSAVG00000003440-9966.561ENSCJAG00000008064ELAVL28864.724Callithrix_jacchus
ENSCSAVG00000003440-10065.049ENSCAFG00000001688ELAVL28264.923Canis_familiaris
ENSCSAVG00000003440-9966.561ENSCAFG00020013836ELAVL29064.923Canis_lupus_dingo
ENSCSAVG00000003440-9966.773ENSCHIG00000025894ELAVL28866.773Capra_hircus
ENSCSAVG00000003440-9966.561ENSTSYG00000013066ELAVL28760.983Carlito_syrichta
ENSCSAVG00000003440-9860.841ENSCAPG00000003609ELAVL29860.129Cavia_aperea
ENSCSAVG00000003440-9966.561ENSCPOG00000010472ELAVL28664.923Cavia_porcellus
ENSCSAVG00000003440-9966.561ENSCCAG00000024508ELAVL28664.724Cebus_capucinus
ENSCSAVG00000003440-9966.561ENSCATG00000012522ELAVL28664.724Cercocebus_atys
ENSCSAVG00000003440-9966.561ENSCLAG00000003388ELAVL28664.724Chinchilla_lanigera
ENSCSAVG00000003440-10065.049ENSCSAG00000009718ELAVL28264.923Chlorocebus_sabaeus
ENSCSAVG00000003440-8573.228ENSCHOG00000000635ELAVL26072.566Choloepus_hoffmanni
ENSCSAVG00000003440-9966.038ENSCPBG00000007841ELAVL28964.497Chrysemys_picta_bellii
ENSCSAVG00000003440-9985.030ENSCING00000004712-9285.714Ciona_intestinalis
ENSCSAVG00000003440-9966.773ENSCANG00000043179ELAVL28866.773Colobus_angolensis_palliatus
ENSCSAVG00000003440-9966.773ENSCGRG00001024409Elavl28866.773Cricetulus_griseus_chok1gshd
ENSCSAVG00000003440-9966.773ENSCGRG00000000487Elavl28866.773Cricetulus_griseus_crigri
ENSCSAVG00000003440-10064.194ENSCSEG00000006335elavl28264.110Cynoglossus_semilaevis
ENSCSAVG00000003440-9965.723ENSCVAG00000013913ELAVL28165.924Cyprinodon_variegatus
ENSCSAVG00000003440-10064.286ENSDARG00000040732elavl210060.989Danio_rerio
ENSCSAVG00000003440-10064.839ENSDNOG00000035657ELAVL28264.724Dasypus_novemcinctus
ENSCSAVG00000003440-9966.561ENSDORG00000010437Elavl28664.923Dipodomys_ordii
ENSCSAVG00000003440-9959.146FBgn0010263Rbp97460.479Drosophila_melanogaster
ENSCSAVG00000003440-9959.763FBgn0086675fne9261.111Drosophila_melanogaster
ENSCSAVG00000003440-10065.049ENSETEG00000006134ELAVL28264.923Echinops_telfairi
ENSCSAVG00000003440-9968.371ENSEBUG00000008179-8570.000Eptatretus_burgeri
ENSCSAVG00000003440-9861.806ENSEBUG00000016008elavl29561.404Eptatretus_burgeri
ENSCSAVG00000003440-9957.962ENSEBUG00000000352-9657.742Eptatretus_burgeri
ENSCSAVG00000003440-10065.049ENSEASG00005004697ELAVL28264.923Equus_asinus_asinus
ENSCSAVG00000003440-9966.773ENSECAG00000020142ELAVL28466.773Equus_caballus
ENSCSAVG00000003440-9854.012ENSEEUG00000008733ELAVL28354.012Erinaceus_europaeus
ENSCSAVG00000003440-10064.516ENSELUG00000010026ELAVL28264.516Esox_lucius
ENSCSAVG00000003440-9966.773ENSFCAG00000011976ELAVL28866.773Felis_catus
ENSCSAVG00000003440-9965.031ENSFALG00000007363ELAVL28264.793Ficedula_albicollis
ENSCSAVG00000003440-9966.561ENSFDAG00000018820ELAVL28664.923Fukomys_damarensis
ENSCSAVG00000003440-9964.669ENSFHEG00000010307ELAVL28164.856Fundulus_heteroclitus
ENSCSAVG00000003440-10064.194ENSGMOG00000011182ELAVL28964.194Gadus_morhua
ENSCSAVG00000003440-9966.352ENSGALG00000015799ELAVL28266.561Gallus_gallus
ENSCSAVG00000003440-10064.194ENSGAFG00000016517ELAVL27664.194Gambusia_affinis
ENSCSAVG00000003440-9965.723ENSGACG00000019484elavl28865.924Gasterosteus_aculeatus
ENSCSAVG00000003440-5665.714ENSGAGG00000005858-9463.158Gopherus_agassizii
ENSCSAVG00000003440-10064.516ENSGAGG00000022382ELAVL28964.497Gopherus_agassizii
ENSCSAVG00000003440-9966.561ENSGGOG00000003678ELAVL28866.561Gorilla_gorilla
ENSCSAVG00000003440-10064.194ENSHBUG00000005968ELAVL28264.110Haplochromis_burtoni
ENSCSAVG00000003440-9966.773ENSHGLG00000005423ELAVL28866.773Heterocephalus_glaber_female
ENSCSAVG00000003440-9966.773ENSHGLG00100002344ELAVL28964.923Heterocephalus_glaber_male
ENSCSAVG00000003440-9963.898ENSHCOG00000005961elavl28163.898Hippocampus_comes
ENSCSAVG00000003440-10063.492ENSIPUG00000012337elavl28063.190Ictalurus_punctatus
ENSCSAVG00000003440-9966.561ENSSTOG00000007792ELAVL28664.923Ictidomys_tridecemlineatus
ENSCSAVG00000003440-9966.561ENSJJAG00000008247Elavl28664.923Jaculus_jaculus
ENSCSAVG00000003440-10064.194ENSKMAG00000006299ELAVL28264.194Kryptolebias_marmoratus
ENSCSAVG00000003440-9965.723ENSLBEG00000027924ELAVL28565.924Labrus_bergylta
ENSCSAVG00000003440-10065.049ENSLACG00000010888ELAVL28961.600Latimeria_chalumnae
ENSCSAVG00000003440-10064.194ENSLOCG00000012575ELAVL28264.201Lepisosteus_oculatus
ENSCSAVG00000003440-10064.839ENSLAFG00000009938ELAVL28564.724Loxodonta_africana
ENSCSAVG00000003440-9966.561ENSMFAG00000039694ELAVL28964.724Macaca_fascicularis
ENSCSAVG00000003440-9966.561ENSMMUG00000010038ELAVL28864.724Macaca_mulatta
ENSCSAVG00000003440-9966.773ENSMNEG00000032526ELAVL28964.724Macaca_nemestrina
ENSCSAVG00000003440-5562.617ENSMLEG00000027781-9661.947Mandrillus_leucophaeus
ENSCSAVG00000003440-10064.078ENSMAMG00000004806ELAVL28964.615Mastacembelus_armatus
ENSCSAVG00000003440-10064.194ENSMZEG00005000778ELAVL28264.110Maylandia_zebra
ENSCSAVG00000003440-9749.818ENSMGAG00000008665ELAVL29750.746Meleagris_gallopavo
ENSCSAVG00000003440-9966.561ENSMAUG00000011955Elavl28866.561Mesocricetus_auratus
ENSCSAVG00000003440-9966.561ENSMICG00000001558ELAVL28762.500Microcebus_murinus
ENSCSAVG00000003440-9966.561ENSMOCG00000016960Elavl28664.923Microtus_ochrogaster
ENSCSAVG00000003440-10064.194ENSMMOG00000012031ELAVL28964.194Mola_mola
ENSCSAVG00000003440-10064.516ENSMODG00000003936ELAVL28264.497Monodelphis_domestica
ENSCSAVG00000003440-9965.931ENSMALG00000003411elavl27866.134Monopterus_albus
ENSCSAVG00000003440-9966.561MGP_CAROLIEiJ_G0026159Elavl28866.561Mus_caroli
ENSCSAVG00000003440-9966.773ENSMUSG00000008489Elavl28866.773Mus_musculus
ENSCSAVG00000003440-9966.561MGP_PahariEiJ_G0028496Elavl28866.561Mus_pahari
ENSCSAVG00000003440-9966.561MGP_SPRETEiJ_G0027124Elavl28866.561Mus_spretus
ENSCSAVG00000003440-10065.049ENSMPUG00000015967ELAVL28264.923Mustela_putorius_furo
ENSCSAVG00000003440-9963.529ENSMLUG00000014210ELAVL28663.127Myotis_lucifugus
ENSCSAVG00000003440-9966.561ENSNGAG00000014535Elavl28664.923Nannospalax_galili
ENSCSAVG00000003440-9858.438ENSNBRG00000010284ELAVL28858.544Neolamprologus_brichardi
ENSCSAVG00000003440-9863.571ENSNBRG00000023764-9762.441Neolamprologus_brichardi
ENSCSAVG00000003440-9966.773ENSNLEG00000016382ELAVL28866.773Nomascus_leucogenys
ENSCSAVG00000003440-9856.308ENSMEUG00000006499ELAVL28256.308Notamacropus_eugenii
ENSCSAVG00000003440-10065.049ENSOPRG00000012874ELAVL28264.923Ochotona_princeps
ENSCSAVG00000003440-9966.773ENSODEG00000002531ELAVL28866.773Octodon_degus
ENSCSAVG00000003440-9963.664ENSONIG00000007552ELAVL28863.422Oreochromis_niloticus
ENSCSAVG00000003440-9859.327ENSOANG00000009634ELAVL28059.292Ornithorhynchus_anatinus
ENSCSAVG00000003440-10065.049ENSOCUG00000005891ELAVL28264.923Oryctolagus_cuniculus
ENSCSAVG00000003440-10064.194ENSORLG00000004217ELAVL28964.577Oryzias_latipes
ENSCSAVG00000003440-9965.723ENSORLG00020016040ELAVL28165.924Oryzias_latipes_hni
ENSCSAVG00000003440-9965.931ENSORLG00015013661ELAVL28166.134Oryzias_latipes_hsok
ENSCSAVG00000003440-10064.194ENSOMEG00000005178ELAVL28264.194Oryzias_melastigma
ENSCSAVG00000003440-10062.271ENSOGAG00000016228ELAVL28661.324Otolemur_garnettii
ENSCSAVG00000003440-10065.049ENSOARG00000014465ELAVL28564.724Ovis_aries
ENSCSAVG00000003440-9966.561ENSPPAG00000041539ELAVL28664.923Pan_paniscus
ENSCSAVG00000003440-9966.773ENSPPRG00000018510ELAVL28866.773Panthera_pardus
ENSCSAVG00000003440-9966.773ENSPTIG00000005627ELAVL28866.773Panthera_tigris_altaica
ENSCSAVG00000003440-9966.561ENSPTRG00000020830ELAVL28964.724Pan_troglodytes
ENSCSAVG00000003440-9966.561ENSPANG00000025263ELAVL28664.724Papio_anubis
ENSCSAVG00000003440-10064.516ENSPKIG00000006187ELAVL28464.516Paramormyrops_kingsleyae
ENSCSAVG00000003440-10063.871ENSPKIG00000001903-8964.110Paramormyrops_kingsleyae
ENSCSAVG00000003440-10064.516ENSPSIG00000015330ELAVL29864.087Pelodiscus_sinensis
ENSCSAVG00000003440-10063.871ENSPMGG00000022018elavl28963.871Periophthalmus_magnuspinnatus
ENSCSAVG00000003440-9966.561ENSPEMG00000014101Elavl28664.923Peromyscus_maniculatus_bairdii
ENSCSAVG00000003440-9965.931ENSPCIG00000011696ELAVL28666.134Phascolarctos_cinereus
ENSCSAVG00000003440-10064.194ENSPFOG00000003436ELAVL27664.194Poecilia_formosa
ENSCSAVG00000003440-9965.315ENSPLAG00000005203ELAVL28964.194Poecilia_latipinna
ENSCSAVG00000003440-9965.723ENSPMEG00000021929ELAVL28165.924Poecilia_mexicana
ENSCSAVG00000003440-10064.194ENSPREG00000017160ELAVL28264.194Poecilia_reticulata
ENSCSAVG00000003440-10065.049ENSPPYG00000019166ELAVL28264.923Pongo_abelii
ENSCSAVG00000003440-9861.538ENSPCAG00000014998ELAVL28261.538Procavia_capensis
ENSCSAVG00000003440-9966.773ENSPCOG00000022819ELAVL28866.773Propithecus_coquereli
ENSCSAVG00000003440-10065.049ENSPVAG00000002688ELAVL28264.923Pteropus_vampyrus
ENSCSAVG00000003440-9965.931ENSPNYG00000001514ELAVL29566.134Pundamilia_nyererei
ENSCSAVG00000003440-10064.194ENSPNAG00000029068ELAVL28264.194Pygocentrus_nattereri
ENSCSAVG00000003440-9966.561ENSRNOG00000006853Elavl28866.561Rattus_norvegicus
ENSCSAVG00000003440-9966.773ENSRBIG00000029495ELAVL28866.773Rhinopithecus_bieti
ENSCSAVG00000003440-9966.773ENSRROG00000041782ELAVL28866.773Rhinopithecus_roxellana
ENSCSAVG00000003440-9966.561ENSSBOG00000028114ELAVL28664.724Saimiri_boliviensis_boliviensis
ENSCSAVG00000003440-9965.723ENSSHAG00000006756ELAVL29860.188Sarcophilus_harrisii
ENSCSAVG00000003440-10063.871ENSSFOG00015001257ELAVL28763.303Scleropages_formosus
ENSCSAVG00000003440-10064.516ENSSFOG00015018252elavl28264.516Scleropages_formosus
ENSCSAVG00000003440-10064.194ENSSMAG00000010745ELAVL28264.194Scophthalmus_maximus
ENSCSAVG00000003440-10064.194ENSSDUG00000008140ELAVL28264.194Seriola_dumerili
ENSCSAVG00000003440-10064.194ENSSLDG00000008455ELAVL28964.194Seriola_lalandi_dorsalis
ENSCSAVG00000003440-10065.049ENSSARG00000005702ELAVL28264.923Sorex_araneus
ENSCSAVG00000003440-10064.516ENSSPUG00000001246ELAVL28964.497Sphenodon_punctatus
ENSCSAVG00000003440-10064.194ENSSPAG00000002388ELAVL28964.194Stegastes_partitus
ENSCSAVG00000003440-10065.049ENSSSCG00000005130ELAVL28964.923Sus_scrofa
ENSCSAVG00000003440-10060.248ENSTGUG00000001349ELAVL28861.243Taeniopygia_guttata
ENSCSAVG00000003440-10064.194ENSTNIG00000011312elavl28664.110Tetraodon_nigroviridis
ENSCSAVG00000003440-9853.538ENSTBEG00000017759ELAVL28253.538Tupaia_belangeri
ENSCSAVG00000003440-10065.049ENSTTRG00000011656ELAVL28264.923Tursiops_truncatus
ENSCSAVG00000003440-9966.561ENSUAMG00000018679ELAVL28864.724Ursus_americanus
ENSCSAVG00000003440-9966.561ENSUMAG00000005644ELAVL29064.923Ursus_maritimus
ENSCSAVG00000003440-10065.049ENSVPAG00000005109ELAVL28264.923Vicugna_pacos
ENSCSAVG00000003440-9966.773ENSVVUG00000021291ELAVL28866.773Vulpes_vulpes
ENSCSAVG00000003440-10063.987ENSXETG00000009387elavl29967.526Xenopus_tropicalis
ENSCSAVG00000003440-9965.723ENSXCOG00000002464ELAVL28765.924Xiphophorus_couchianus
ENSCSAVG00000003440-10064.194ENSXMAG00000029211ELAVL27664.194Xiphophorus_maculatus

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