EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003476 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2905 bases
Position: chrreftig_51:1073863-1076767
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000005828	Cwf_Cwc_15	PF04889.12	7.2e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000005903	-	1150	-	ENSCSAVP00000005828	216 (aa)	-	H2YKH6

Gene Model

Click here to download ENSCSAVG00000003476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003476	-	100	59.389	ENSG00000150316	CWC15	100	58.952	Homo_sapiens
ENSCSAVG00000003476	-	100	54.393	ENSAPOG00000003107	cwc15	94	55.649	Acanthochromis_polyacanthus
ENSCSAVG00000003476	-	100	58.009	ENSAMEG00000011392	CWC15	100	58.009	Ailuropoda_melanoleuca
ENSCSAVG00000003476	-	100	55.042	ENSACIG00000015258	cwc15	100	56.303	Amphilophus_citrinellus
ENSCSAVG00000003476	-	100	54.393	ENSAOCG00000010738	cwc15	100	55.649	Amphiprion_ocellaris
ENSCSAVG00000003476	-	100	54.393	ENSAPEG00000004563	cwc15	100	55.649	Amphiprion_percula
ENSCSAVG00000003476	-	100	54.812	ENSATEG00000013290	cwc15	100	56.067	Anabas_testudineus
ENSCSAVG00000003476	-	100	58.442	ENSAPLG00000003221	CWC15	100	59.740	Anas_platyrhynchos
ENSCSAVG00000003476	-	87	56.716	ENSACAG00000013987	CWC15	90	56.219	Anolis_carolinensis
ENSCSAVG00000003476	-	100	59.389	ENSANAG00000020484	CWC15	100	58.952	Aotus_nancymaae
ENSCSAVG00000003476	-	100	55.696	ENSACLG00000012474	cwc15	100	57.806	Astatotilapia_calliptera
ENSCSAVG00000003476	-	100	56.250	ENSAMXG00000007538	cwc15	100	57.083	Astyanax_mexicanus
ENSCSAVG00000003476	-	100	58.442	ENSBTAG00000007913	CWC15	100	58.442	Bos_taurus
ENSCSAVG00000003476	-	100	55.652	WBGene00011687	cwc-15	100	55.652	Caenorhabditis_elegans
ENSCSAVG00000003476	-	100	59.389	ENSCJAG00000040352	CWC15	100	58.952	Callithrix_jacchus
ENSCSAVG00000003476	-	100	58.442	ENSCAFG00000004134	CWC15	100	58.442	Canis_familiaris
ENSCSAVG00000003476	-	100	56.277	ENSCAFG00000005959	-	100	55.844	Canis_familiaris
ENSCSAVG00000003476	-	100	58.261	ENSCAFG00020016515	CWC15	100	58.261	Canis_lupus_dingo
ENSCSAVG00000003476	-	100	58.442	ENSCHIG00000013423	CWC15	100	58.442	Capra_hircus
ENSCSAVG00000003476	-	100	59.389	ENSTSYG00000010873	-	100	58.952	Carlito_syrichta
ENSCSAVG00000003476	-	100	57.826	ENSTSYG00000000407	-	100	57.826	Carlito_syrichta
ENSCSAVG00000003476	-	83	42.935	ENSCAPG00000017015	CWC15	81	42.935	Cavia_aperea
ENSCSAVG00000003476	-	100	59.389	ENSCPOG00000006249	CWC15	100	58.952	Cavia_porcellus
ENSCSAVG00000003476	-	100	59.389	ENSCCAG00000026289	CWC15	100	58.952	Cebus_capucinus
ENSCSAVG00000003476	-	100	59.389	ENSCATG00000030235	CWC15	100	58.952	Cercocebus_atys
ENSCSAVG00000003476	-	100	58.952	ENSCLAG00000000129	CWC15	100	58.515	Chinchilla_lanigera
ENSCSAVG00000003476	-	100	59.389	ENSCSAG00000003299	CWC15	100	58.952	Chlorocebus_sabaeus
ENSCSAVG00000003476	-	100	57.391	ENSCPBG00000024037	CWC15	100	59.130	Chrysemys_picta_bellii
ENSCSAVG00000003476	-	100	85.714	ENSCING00000012768	-	100	88.479	Ciona_intestinalis
ENSCSAVG00000003476	-	100	59.389	ENSCANG00000028070	CWC15	100	58.952	Colobus_angolensis_palliatus
ENSCSAVG00000003476	-	100	59.389	ENSCGRG00001013337	Cwc15	100	58.952	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003476	-	100	59.389	ENSCGRG00000015359	Cwc15	100	58.952	Cricetulus_griseus_crigri
ENSCSAVG00000003476	-	100	53.878	ENSCSEG00000018582	cwc15	94	55.102	Cynoglossus_semilaevis
ENSCSAVG00000003476	-	100	56.723	ENSCVAG00000014417	cwc15	100	54.622	Cyprinodon_variegatus
ENSCSAVG00000003476	-	100	54.065	ENSDARG00000013382	cwc15	100	54.065	Danio_rerio
ENSCSAVG00000003476	-	100	58.442	ENSDNOG00000041326	CWC15	100	58.442	Dasypus_novemcinctus
ENSCSAVG00000003476	-	85	43.284	ENSDNOG00000046295	-	100	44.279	Dasypus_novemcinctus
ENSCSAVG00000003476	-	100	59.471	ENSDORG00000011075	Cwc15	100	59.031	Dipodomys_ordii
ENSCSAVG00000003476	-	100	45.385	FBgn0040235	c12.1	100	47.692	Drosophila_melanogaster
ENSCSAVG00000003476	-	63	48.611	ENSETEG00000010889	-	97	49.645	Echinops_telfairi
ENSCSAVG00000003476	-	64	53.691	ENSETEG00000006649	-	97	54.483	Echinops_telfairi
ENSCSAVG00000003476	-	100	57.848	ENSEBUG00000013107	cwc15	100	57.848	Eptatretus_burgeri
ENSCSAVG00000003476	-	100	58.009	ENSEASG00005011279	CWC15	100	57.143	Equus_asinus_asinus
ENSCSAVG00000003476	-	100	58.009	ENSECAG00000013314	CWC15	100	58.009	Equus_caballus
ENSCSAVG00000003476	-	100	58.442	ENSEEUG00000002124	CWC15	100	58.442	Erinaceus_europaeus
ENSCSAVG00000003476	-	100	53.306	ENSELUG00000008086	cwc15	100	54.959	Esox_lucius
ENSCSAVG00000003476	-	100	59.389	ENSFCAG00000007826	-	100	59.389	Felis_catus
ENSCSAVG00000003476	-	100	57.826	ENSFALG00000000326	CWC15	100	59.130	Ficedula_albicollis
ENSCSAVG00000003476	-	100	59.389	ENSFDAG00000014629	CWC15	100	58.952	Fukomys_damarensis
ENSCSAVG00000003476	-	100	55.649	ENSFHEG00000002105	cwc15	100	53.138	Fundulus_heteroclitus
ENSCSAVG00000003476	-	100	45.726	ENSGMOG00000016146	cwc15	100	47.009	Gadus_morhua
ENSCSAVG00000003476	-	100	57.826	ENSGALG00000017207	CWC15	100	59.130	Gallus_gallus
ENSCSAVG00000003476	-	100	55.462	ENSGAFG00000005721	cwc15	100	56.723	Gambusia_affinis
ENSCSAVG00000003476	-	100	55.932	ENSGACG00000020374	cwc15	100	55.932	Gasterosteus_aculeatus
ENSCSAVG00000003476	-	100	56.957	ENSGAGG00000024008	CWC15	99	58.696	Gopherus_agassizii
ENSCSAVG00000003476	-	100	59.389	ENSGGOG00000011926	CWC15	100	58.952	Gorilla_gorilla
ENSCSAVG00000003476	-	100	55.932	ENSHBUG00000003341	cwc15	100	58.051	Haplochromis_burtoni
ENSCSAVG00000003476	-	100	59.389	ENSHGLG00000006521	CWC15	100	58.952	Heterocephalus_glaber_female
ENSCSAVG00000003476	-	99	52.941	ENSHGLG00000003773	-	100	52.489	Heterocephalus_glaber_female
ENSCSAVG00000003476	-	100	57.709	ENSHGLG00100007904	-	100	57.709	Heterocephalus_glaber_male
ENSCSAVG00000003476	-	100	51.364	ENSHGLG00100003268	-	100	51.818	Heterocephalus_glaber_male
ENSCSAVG00000003476	-	100	54.878	ENSHCOG00000006089	cwc15	100	53.469	Hippocampus_comes
ENSCSAVG00000003476	-	100	59.389	ENSSTOG00000002485	CWC15	100	58.952	Ictidomys_tridecemlineatus
ENSCSAVG00000003476	-	94	54.327	ENSJJAG00000016968	-	100	54.808	Jaculus_jaculus
ENSCSAVG00000003476	-	100	57.895	ENSJJAG00000012940	-	100	57.895	Jaculus_jaculus
ENSCSAVG00000003476	-	100	58.772	ENSJJAG00000012773	-	100	58.772	Jaculus_jaculus
ENSCSAVG00000003476	-	100	54.661	ENSKMAG00000011877	cwc15	100	54.237	Kryptolebias_marmoratus
ENSCSAVG00000003476	-	100	53.498	ENSLBEG00000026116	cwc15	100	54.733	Labrus_bergylta
ENSCSAVG00000003476	-	100	56.466	ENSLACG00000012239	CWC15	100	57.328	Latimeria_chalumnae
ENSCSAVG00000003476	-	100	57.692	ENSLOCG00000007570	cwc15	100	57.692	Lepisosteus_oculatus
ENSCSAVG00000003476	-	100	58.442	ENSLAFG00000004456	CWC15	100	58.442	Loxodonta_africana
ENSCSAVG00000003476	-	100	59.389	ENSMFAG00000044052	CWC15	100	58.952	Macaca_fascicularis
ENSCSAVG00000003476	-	100	59.389	ENSMMUG00000044962	CWC15	100	58.952	Macaca_mulatta
ENSCSAVG00000003476	-	100	59.389	ENSMNEG00000033968	CWC15	100	58.952	Macaca_nemestrina
ENSCSAVG00000003476	-	100	59.389	ENSMLEG00000035668	CWC15	100	58.952	Mandrillus_leucophaeus
ENSCSAVG00000003476	-	100	56.962	ENSMAMG00000013540	cwc15	100	57.806	Mastacembelus_armatus
ENSCSAVG00000003476	-	100	55.696	ENSMZEG00005015901	cwc15	100	57.806	Maylandia_zebra
ENSCSAVG00000003476	-	100	57.826	ENSMGAG00000015193	CWC15	100	59.130	Meleagris_gallopavo
ENSCSAVG00000003476	-	100	59.389	ENSMAUG00000011686	Cwc15	100	58.952	Mesocricetus_auratus
ENSCSAVG00000003476	-	100	59.389	ENSMICG00000042790	CWC15	100	58.952	Microcebus_murinus
ENSCSAVG00000003476	-	100	59.389	ENSMOCG00000016094	Cwc15	100	58.952	Microtus_ochrogaster
ENSCSAVG00000003476	-	100	55.217	ENSMMOG00000016343	cwc15	100	55.217	Mola_mola
ENSCSAVG00000003476	-	99	57.642	ENSMODG00000000169	-	96	57.642	Monodelphis_domestica
ENSCSAVG00000003476	-	100	44.934	ENSMODG00000003709	-	100	45.815	Monodelphis_domestica
ENSCSAVG00000003476	-	100	56.356	ENSMALG00000019325	cwc15	100	56.356	Monopterus_albus
ENSCSAVG00000003476	-	100	59.825	MGP_CAROLIEiJ_G0031782	Cwc15	100	59.389	Mus_caroli
ENSCSAVG00000003476	-	100	59.825	ENSMUSG00000004096	Cwc15	100	59.389	Mus_musculus
ENSCSAVG00000003476	-	100	59.825	MGP_PahariEiJ_G0014658	Cwc15	100	59.389	Mus_pahari
ENSCSAVG00000003476	-	100	60.262	MGP_SPRETEiJ_G0032902	Cwc15	100	59.825	Mus_spretus
ENSCSAVG00000003476	-	100	58.442	ENSMPUG00000012265	CWC15	100	58.442	Mustela_putorius_furo
ENSCSAVG00000003476	-	100	56.710	ENSMLUG00000026676	-	100	55.844	Myotis_lucifugus
ENSCSAVG00000003476	-	100	58.442	ENSMLUG00000002032	-	100	58.442	Myotis_lucifugus
ENSCSAVG00000003476	-	100	59.389	ENSNGAG00000016450	Cwc15	100	58.952	Nannospalax_galili
ENSCSAVG00000003476	-	100	55.696	ENSNBRG00000018245	cwc15	100	57.806	Neolamprologus_brichardi
ENSCSAVG00000003476	-	100	59.389	ENSNLEG00000031455	CWC15	100	58.952	Nomascus_leucogenys
ENSCSAVG00000003476	-	100	59.211	ENSOPRG00000001706	-	100	59.211	Ochotona_princeps
ENSCSAVG00000003476	-	100	59.389	ENSODEG00000014060	-	100	58.952	Octodon_degus
ENSCSAVG00000003476	-	100	47.297	ENSODEG00000009713	-	100	46.847	Octodon_degus
ENSCSAVG00000003476	-	100	47.598	ENSODEG00000008155	-	100	46.725	Octodon_degus
ENSCSAVG00000003476	-	100	55.405	ENSODEG00000002251	-	100	54.955	Octodon_degus
ENSCSAVG00000003476	-	100	58.079	ENSODEG00000020310	-	100	57.642	Octodon_degus
ENSCSAVG00000003476	-	100	55.696	ENSONIG00000004326	cwc15	100	56.962	Oreochromis_niloticus
ENSCSAVG00000003476	-	100	59.130	ENSOANG00000010404	-	100	58.261	Ornithorhynchus_anatinus
ENSCSAVG00000003476	-	100	55.111	ENSOANG00000001673	-	100	55.111	Ornithorhynchus_anatinus
ENSCSAVG00000003476	-	100	59.389	ENSOCUG00000001629	CWC15	100	58.952	Oryctolagus_cuniculus
ENSCSAVG00000003476	-	100	53.469	ENSORLG00000008550	cwc15	85	54.286	Oryzias_latipes
ENSCSAVG00000003476	-	100	53.689	ENSORLG00020002475	cwc15	85	54.508	Oryzias_latipes_hni
ENSCSAVG00000003476	-	100	53.909	ENSORLG00015007291	cwc15	85	54.733	Oryzias_latipes_hsok
ENSCSAVG00000003476	-	100	53.498	ENSOMEG00000000650	cwc15	100	54.321	Oryzias_melastigma
ENSCSAVG00000003476	-	100	59.389	ENSOGAG00000001686	CWC15	100	58.952	Otolemur_garnettii
ENSCSAVG00000003476	-	100	58.442	ENSOARG00000009316	-	100	58.442	Ovis_aries
ENSCSAVG00000003476	-	90	43.902	ENSOARG00000016298	-	99	44.175	Ovis_aries
ENSCSAVG00000003476	-	100	59.389	ENSPPAG00000033609	CWC15	100	58.952	Pan_paniscus
ENSCSAVG00000003476	-	100	56.277	ENSPPRG00000015290	-	100	55.844	Panthera_pardus
ENSCSAVG00000003476	-	100	59.389	ENSPPRG00000005063	-	100	59.389	Panthera_pardus
ENSCSAVG00000003476	-	62	76.744	ENSPTIG00000006844	-	85	76.744	Panthera_tigris_altaica
ENSCSAVG00000003476	-	100	48.387	ENSPTIG00000021149	-	100	48.387	Panthera_tigris_altaica
ENSCSAVG00000003476	-	100	59.389	ENSPTRG00000044239	CWC15	100	58.952	Pan_troglodytes
ENSCSAVG00000003476	-	100	59.389	ENSPANG00000019125	CWC15	100	58.952	Papio_anubis
ENSCSAVG00000003476	-	100	57.265	ENSPKIG00000020021	cwc15	100	58.547	Paramormyrops_kingsleyae
ENSCSAVG00000003476	-	100	56.957	ENSPSIG00000011569	CWC15	100	58.696	Pelodiscus_sinensis
ENSCSAVG00000003476	-	100	46.053	ENSPMGG00000002740	cwc15	100	47.368	Periophthalmus_magnuspinnatus
ENSCSAVG00000003476	-	100	59.389	ENSPEMG00000021432	Cwc15	100	58.952	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003476	-	63	62.937	ENSPMAG00000007890	cwc15	97	60.839	Petromyzon_marinus
ENSCSAVG00000003476	-	100	58.009	ENSPCIG00000001348	CWC15	100	58.009	Phascolarctos_cinereus
ENSCSAVG00000003476	-	100	55.462	ENSPFOG00000002621	cwc15	100	56.723	Poecilia_formosa
ENSCSAVG00000003476	-	100	55.462	ENSPLAG00000022639	cwc15	100	56.723	Poecilia_latipinna
ENSCSAVG00000003476	-	100	55.462	ENSPMEG00000001332	cwc15	100	56.723	Poecilia_mexicana
ENSCSAVG00000003476	-	100	55.882	ENSPREG00000021919	cwc15	100	57.143	Poecilia_reticulata
ENSCSAVG00000003476	-	100	59.389	ENSPPYG00000003785	CWC15	100	58.952	Pongo_abelii
ENSCSAVG00000003476	-	100	48.918	ENSPCAG00000004205	CWC15	100	49.784	Procavia_capensis
ENSCSAVG00000003476	-	100	59.389	ENSPCOG00000023913	CWC15	100	58.952	Propithecus_coquereli
ENSCSAVG00000003476	-	100	58.442	ENSPVAG00000017517	CWC15	100	58.442	Pteropus_vampyrus
ENSCSAVG00000003476	-	100	55.696	ENSPNYG00000019347	cwc15	100	57.806	Pundamilia_nyererei
ENSCSAVG00000003476	-	58	45.455	ENSPNAG00000022563	cwc15	77	52.727	Pygocentrus_nattereri
ENSCSAVG00000003476	-	100	59.389	ENSRNOG00000008490	Cwc15	100	58.952	Rattus_norvegicus
ENSCSAVG00000003476	-	100	56.769	ENSRNOG00000025157	AABR07008904.1	100	56.332	Rattus_norvegicus
ENSCSAVG00000003476	-	100	59.389	ENSRBIG00000030781	CWC15	100	58.952	Rhinopithecus_bieti
ENSCSAVG00000003476	-	100	59.389	ENSRROG00000037199	CWC15	100	58.952	Rhinopithecus_roxellana
ENSCSAVG00000003476	-	100	59.389	ENSSBOG00000006158	-	100	58.952	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003476	-	100	42.795	ENSSBOG00000035727	-	100	42.358	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003476	-	99	41.850	ENSSBOG00000033926	-	99	42.478	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003476	-	100	58.333	ENSSHAG00000000335	-	100	58.333	Sarcophilus_harrisii
ENSCSAVG00000003476	-	100	58.009	ENSSHAG00000016534	-	100	58.009	Sarcophilus_harrisii
ENSCSAVG00000003476	-	100	56.410	ENSSFOG00015011833	cwc15	100	57.692	Scleropages_formosus
ENSCSAVG00000003476	-	100	55.230	ENSSMAG00000016275	cwc15	100	56.485	Scophthalmus_maximus
ENSCSAVG00000003476	-	100	53.629	ENSSDUG00000012642	cwc15	100	54.839	Seriola_dumerili
ENSCSAVG00000003476	-	100	53.414	ENSSLDG00000016292	cwc15	100	54.618	Seriola_lalandi_dorsalis
ENSCSAVG00000003476	-	99	36.406	ENSSARG00000004113	-	99	35.185	Sorex_araneus
ENSCSAVG00000003476	-	92	52.404	ENSSPUG00000004441	CWC15	99	53.365	Sphenodon_punctatus
ENSCSAVG00000003476	-	100	54.393	ENSSPAG00000004630	cwc15	100	55.649	Stegastes_partitus
ENSCSAVG00000003476	-	100	58.874	ENSSSCG00000014961	CWC15	100	58.874	Sus_scrofa
ENSCSAVG00000003476	-	100	58.261	ENSTGUG00000012817	CWC15	100	59.565	Taeniopygia_guttata
ENSCSAVG00000003476	-	100	53.750	ENSTRUG00000015508	cwc15	100	53.750	Takifugu_rubripes
ENSCSAVG00000003476	-	100	56.710	ENSTNIG00000011790	cwc15	100	54.545	Tetraodon_nigroviridis
ENSCSAVG00000003476	-	69	60.274	ENSTBEG00000014319	CWC15	65	58.824	Tupaia_belangeri
ENSCSAVG00000003476	-	100	50.655	ENSTTRG00000004922	CWC15	100	50.655	Tursiops_truncatus
ENSCSAVG00000003476	-	100	58.261	ENSUAMG00000026040	CWC15	100	58.261	Ursus_americanus
ENSCSAVG00000003476	-	100	58.442	ENSUMAG00000007161	CWC15	100	58.442	Ursus_maritimus
ENSCSAVG00000003476	-	100	58.009	ENSVPAG00000005841	CWC15	100	58.009	Vicugna_pacos
ENSCSAVG00000003476	-	100	56.277	ENSVVUG00000012624	-	100	55.411	Vulpes_vulpes
ENSCSAVG00000003476	-	100	55.947	ENSVVUG00000011648	-	100	56.828	Vulpes_vulpes
ENSCSAVG00000003476	-	100	58.590	ENSXETG00000007076	cwc15	100	60.352	Xenopus_tropicalis
ENSCSAVG00000003476	-	100	55.462	ENSXCOG00000006310	cwc15	100	56.723	Xiphophorus_couchianus
ENSCSAVG00000003476	-	100	55.462	ENSXMAG00000011472	cwc15	100	56.723	Xiphophorus_maculatus