EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003490 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
2831 bases
Position
chrreftig_22:610120-612950
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005843KH_2PF07650.171.5e-1011
ENSCSAVP00000005843Ribosomal_S3_CPF00189.201.7e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005918-868-ENSCSAVP00000005843257 (aa)-H2YKJ1
Gene Model
Click here to download ENSCSAVG00000003490's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003490's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003490-9285.654ENSG00000149273RPS310097.222Homo_sapiens
ENSCSAVG00000003490-9285.654ENSAMEG00000017051RPS39286.784Ailuropoda_melanoleuca
ENSCSAVG00000003490-9462.241ENSAMEG00000007309-9163.877Ailuropoda_melanoleuca
ENSCSAVG00000003490-9683.333ENSACIG00000023535rps39486.522Amphilophus_citrinellus
ENSCSAVG00000003490-9682.927ENSAOCG00000013654rps39486.522Amphiprion_ocellaris
ENSCSAVG00000003490-9682.927ENSAPEG00000022808rps39486.522Amphiprion_percula
ENSCSAVG00000003490-9683.333ENSATEG00000003502rps39486.522Anabas_testudineus
ENSCSAVG00000003490-9264.730ENSAPLG00000014513-9465.368Anas_platyrhynchos
ENSCSAVG00000003490-9285.232ENSACAG00000002169-9586.522Anolis_carolinensis
ENSCSAVG00000003490-8963.319ENSANAG00000022561-9270.588Aotus_nancymaae
ENSCSAVG00000003490-9285.654ENSANAG00000027669-9386.784Aotus_nancymaae
ENSCSAVG00000003490-9270.886ENSANAG00000023438-8480.503Aotus_nancymaae
ENSCSAVG00000003490-9683.333ENSACLG00000013763rps38881.900Astatotilapia_calliptera
ENSCSAVG00000003490-9682.927ENSAMXG00000013642rps39486.522Astyanax_mexicanus
ENSCSAVG00000003490-9285.654ENSBTAG00000005620RPS39386.784Bos_taurus
ENSCSAVG00000003490-9371.901WBGene00004472rps-39174.554Caenorhabditis_elegans
ENSCSAVG00000003490-9285.232ENSCJAG00000015424RPS39286.822Callithrix_jacchus
ENSCSAVG00000003490-9285.654ENSCAFG00000005402RPS39386.784Canis_familiaris
ENSCSAVG00000003490-9285.654ENSCAFG00020002102-9386.784Canis_lupus_dingo
ENSCSAVG00000003490-9285.654ENSCHIG00000012342-9386.784Capra_hircus
ENSCSAVG00000003490-8754.709ENSCHIG00000015952-8657.212Capra_hircus
ENSCSAVG00000003490-9285.654ENSTSYG00000008664-9488.506Carlito_syrichta
ENSCSAVG00000003490-9379.079ENSTSYG00000034881-9682.707Carlito_syrichta
ENSCSAVG00000003490-8885.903ENSCAPG00000016681-9087.097Cavia_aperea
ENSCSAVG00000003490-9285.654ENSCPOG00000004665-9386.784Cavia_porcellus
ENSCSAVG00000003490-9285.654ENSCCAG00000022155RPS39386.784Cebus_capucinus
ENSCSAVG00000003490-9276.891ENSCCAG00000021048-9082.659Cebus_capucinus
ENSCSAVG00000003490-9285.654ENSCATG00000035348-9386.784Cercocebus_atys
ENSCSAVG00000003490-7775.581ENSCATG00000011713-9078.947Cercocebus_atys
ENSCSAVG00000003490-9269.620ENSCATG00000037875-8975.000Cercocebus_atys
ENSCSAVG00000003490-8876.889ENSCATG00000043998-10073.958Cercocebus_atys
ENSCSAVG00000003490-9285.654ENSCLAG00000013819-9386.784Chinchilla_lanigera
ENSCSAVG00000003490-9285.654ENSCSAG00000003937-9386.784Chlorocebus_sabaeus
ENSCSAVG00000003490-8869.163ENSCHOG00000005328-9369.163Choloepus_hoffmanni
ENSCSAVG00000003490-7285.326ENSCPBG00000027671-8187.356Chrysemys_picta_bellii
ENSCSAVG00000003490-9595.492ENSCING00000005003-8796.522Ciona_intestinalis
ENSCSAVG00000003490-9277.215ENSCANG00000041522-9873.762Colobus_angolensis_palliatus
ENSCSAVG00000003490-9285.654ENSCANG00000036026RPS39386.784Colobus_angolensis_palliatus
ENSCSAVG00000003490-9285.654ENSCGRG00001013667Rps39588.889Cricetulus_griseus_chok1gshd
ENSCSAVG00000003490-9165.957ENSCGRG00001003744-9265.789Cricetulus_griseus_chok1gshd
ENSCSAVG00000003490-9279.747ENSCGRG00000019934-9380.617Cricetulus_griseus_crigri
ENSCSAVG00000003490-9165.957ENSCGRG00000004849-9265.789Cricetulus_griseus_crigri
ENSCSAVG00000003490-9183.475ENSCGRG00000004739-9488.824Cricetulus_griseus_crigri
ENSCSAVG00000003490-8871.681ENSCGRG00000000152-9471.681Cricetulus_griseus_crigri
ENSCSAVG00000003490-9683.333ENSCSEG00000014436rps39486.522Cynoglossus_semilaevis
ENSCSAVG00000003490-9682.927ENSCVAG00000009247rps39486.522Cyprinodon_variegatus
ENSCSAVG00000003490-9682.927ENSDARG00000103007rps39486.522Danio_rerio
ENSCSAVG00000003490-9764.400ENSDNOG00000014888-9267.982Dasypus_novemcinctus
ENSCSAVG00000003490-9370.293ENSDNOG00000032230-9171.806Dasypus_novemcinctus
ENSCSAVG00000003490-9285.654ENSDNOG00000037189-8686.207Dasypus_novemcinctus
ENSCSAVG00000003490-6967.416ENSDORG00000025518-9872.414Dipodomys_ordii
ENSCSAVG00000003490-9285.654ENSDORG00000002974Rps39386.784Dipodomys_ordii
ENSCSAVG00000003490-8981.140FBgn0002622RpS39182.143Drosophila_melanogaster
ENSCSAVG00000003490-9271.730ENSETEG00000015500-8082.474Echinops_telfairi
ENSCSAVG00000003490-5674.510ENSEBUG00000003683rps38074.510Eptatretus_burgeri
ENSCSAVG00000003490-9285.654ENSEASG00005014248-8186.784Equus_asinus_asinus
ENSCSAVG00000003490-9285.654ENSECAG00000013915-8186.784Equus_caballus
ENSCSAVG00000003490-9283.544ENSEEUG00000014531-9384.581Erinaceus_europaeus
ENSCSAVG00000003490-9085.281ENSELUG00000017575-9485.217Esox_lucius
ENSCSAVG00000003490-9384.232ENSELUG00000024369-9385.217Esox_lucius
ENSCSAVG00000003490-9285.654ENSFCAG00000011942-9386.784Felis_catus
ENSCSAVG00000003490-6460.000ENSFCAG00000033114-9460.000Felis_catus
ENSCSAVG00000003490-9285.654ENSFALG00000007956-7187.225Ficedula_albicollis
ENSCSAVG00000003490-5960.870ENSFDAG00000012411-9060.494Fukomys_damarensis
ENSCSAVG00000003490-9285.654ENSFDAG00000016319-9386.784Fukomys_damarensis
ENSCSAVG00000003490-9682.520ENSFHEG00000022153rps39486.087Fundulus_heteroclitus
ENSCSAVG00000003490-9284.810ENSGMOG00000000838rps39386.087Gadus_morhua
ENSCSAVG00000003490-9285.654ENSGALG00000017330-9387.225Gallus_gallus
ENSCSAVG00000003490-9683.333ENSGAFG00000015709rps39486.522Gambusia_affinis
ENSCSAVG00000003490-9285.232ENSGACG00000013384rps39486.522Gasterosteus_aculeatus
ENSCSAVG00000003490-5265.672ENSGAGG00000022297-7366.154Gopherus_agassizii
ENSCSAVG00000003490-9285.654ENSGAGG00000012704-9387.225Gopherus_agassizii
ENSCSAVG00000003490-9285.654ENSGGOG00000006519RPS39386.784Gorilla_gorilla
ENSCSAVG00000003490-9272.574ENSGGOG00000038504-8672.973Gorilla_gorilla
ENSCSAVG00000003490-9280.169ENSGGOG00000026674-9181.057Gorilla_gorilla
ENSCSAVG00000003490-9369.328ENSGGOG00000022405-8079.167Gorilla_gorilla
ENSCSAVG00000003490-9683.333ENSHBUG00000002368rps39486.087Haplochromis_burtoni
ENSCSAVG00000003490-9285.232ENSHGLG00000019339RPS39386.784Heterocephalus_glaber_female
ENSCSAVG00000003490-9285.232ENSHGLG00100012857RPS39386.784Heterocephalus_glaber_male
ENSCSAVG00000003490-8984.348ENSHCOG00000005060rps38985.973Hippocampus_comes
ENSCSAVG00000003490-9683.333ENSIPUG00000005685rps39486.522Ictalurus_punctatus
ENSCSAVG00000003490-9285.654ENSSTOG00000028813-9386.784Ictidomys_tridecemlineatus
ENSCSAVG00000003490-6887.429ENSJJAG00000017023-9687.429Jaculus_jaculus
ENSCSAVG00000003490-9285.654ENSJJAG00000018981Rps39386.784Jaculus_jaculus
ENSCSAVG00000003490-9683.333ENSKMAG00000009747rps39486.522Kryptolebias_marmoratus
ENSCSAVG00000003490-9285.232ENSLBEG00000021017rps39486.522Labrus_bergylta
ENSCSAVG00000003490-9284.810ENSLACG00000006132-9386.784Latimeria_chalumnae
ENSCSAVG00000003490-9384.100ENSLOCG00000006405rps39485.652Lepisosteus_oculatus
ENSCSAVG00000003490-9285.654ENSLAFG00000004297-9386.784Loxodonta_africana
ENSCSAVG00000003490-9285.654ENSMFAG00000000525RPS39386.784Macaca_fascicularis
ENSCSAVG00000003490-7864.500ENSMMUG00000037851-7971.345Macaca_mulatta
ENSCSAVG00000003490-9285.654ENSMMUG00000009019RPS39386.784Macaca_mulatta
ENSCSAVG00000003490-8177.778ENSMMUG00000045640-9477.778Macaca_mulatta
ENSCSAVG00000003490-8177.295ENSMNEG00000030799-9372.464Macaca_nemestrina
ENSCSAVG00000003490-9285.654ENSMNEG00000032069-9386.784Macaca_nemestrina
ENSCSAVG00000003490-8181.159ENSMLEG00000017301-9475.845Mandrillus_leucophaeus
ENSCSAVG00000003490-9285.654ENSMLEG00000027047RPS39386.784Mandrillus_leucophaeus
ENSCSAVG00000003490-9268.776ENSMLEG00000032606-9370.115Mandrillus_leucophaeus
ENSCSAVG00000003490-9276.371ENSMLEG00000044314-9377.093Mandrillus_leucophaeus
ENSCSAVG00000003490-9683.740ENSMAMG00000020146rps39486.522Mastacembelus_armatus
ENSCSAVG00000003490-9683.333ENSMZEG00005024678rps39379.130Maylandia_zebra
ENSCSAVG00000003490-9279.325ENSMAUG00000006329-9380.617Mesocricetus_auratus
ENSCSAVG00000003490-9260.759ENSMAUG00000015088-9260.793Mesocricetus_auratus
ENSCSAVG00000003490-9285.654ENSMAUG00000012031-9386.784Mesocricetus_auratus
ENSCSAVG00000003490-9285.654ENSMICG00000030910-10081.818Microcebus_murinus
ENSCSAVG00000003490-9273.950ENSMICG00000033427-9371.053Microcebus_murinus
ENSCSAVG00000003490-9285.654ENSMOCG00000007699Rps39386.784Microtus_ochrogaster
ENSCSAVG00000003490-9682.114ENSMMOG00000005152rps39485.652Mola_mola
ENSCSAVG00000003490-9285.232ENSMODG00000006945-9386.784Monodelphis_domestica
ENSCSAVG00000003490-9683.740ENSMALG00000021156rps39486.522Monopterus_albus
ENSCSAVG00000003490-9285.654MGP_CAROLIEiJ_G0030029Rps39386.784Mus_caroli
ENSCSAVG00000003490-9285.654ENSMUSG00000030744Rps39386.784Mus_musculus
ENSCSAVG00000003490-9285.654MGP_PahariEiJ_G0013250Rps39988.889Mus_pahari
ENSCSAVG00000003490-9285.654MGP_SPRETEiJ_G0031139Rps39386.784Mus_spretus
ENSCSAVG00000003490-9285.654ENSMPUG00000009197-9386.784Mustela_putorius_furo
ENSCSAVG00000003490-8964.912ENSMLUG00000026956-9065.596Myotis_lucifugus
ENSCSAVG00000003490-8963.043ENSMLUG00000025123-9163.636Myotis_lucifugus
ENSCSAVG00000003490-9285.654ENSMLUG00000004079-9386.784Myotis_lucifugus
ENSCSAVG00000003490-9285.654ENSNGAG00000015514Rps39288.304Nannospalax_galili
ENSCSAVG00000003490-9683.333ENSNBRG00000006241rps39486.522Neolamprologus_brichardi
ENSCSAVG00000003490-7085.083ENSNLEG00000036221-9086.550Nomascus_leucogenys
ENSCSAVG00000003490-9274.262ENSNLEG00000027260-9076.119Nomascus_leucogenys
ENSCSAVG00000003490-5477.698ENSNLEG00000029322-9877.698Nomascus_leucogenys
ENSCSAVG00000003490-9284.810ENSMEUG00000011581-9386.784Notamacropus_eugenii
ENSCSAVG00000003490-6785.217ENSOPRG00000009496-6785.217Ochotona_princeps
ENSCSAVG00000003490-9285.232ENSODEG00000004564-9386.344Octodon_degus
ENSCSAVG00000003490-9275.527ENSODEG00000002537-9376.652Octodon_degus
ENSCSAVG00000003490-9274.262ENSODEG00000000640-9375.330Octodon_degus
ENSCSAVG00000003490-5975.000ENSODEG00000001789-9775.000Octodon_degus
ENSCSAVG00000003490-6181.633ENSODEG00000006804-9081.633Octodon_degus
ENSCSAVG00000003490-9683.740ENSONIG00000001263rps38386.522Oreochromis_niloticus
ENSCSAVG00000003490-8272.038ENSOANG00000009953-10072.038Ornithorhynchus_anatinus
ENSCSAVG00000003490-9285.654ENSOCUG00000022412-8186.784Oryctolagus_cuniculus
ENSCSAVG00000003490-9082.328ENSOCUG00000024686-9283.333Oryctolagus_cuniculus
ENSCSAVG00000003490-9683.333ENSORLG00000000607rps39486.522Oryzias_latipes
ENSCSAVG00000003490-9683.333ENSORLG00020021035rps39486.522Oryzias_latipes_hni
ENSCSAVG00000003490-9682.927ENSORLG00015010080rps39486.522Oryzias_latipes_hsok
ENSCSAVG00000003490-6383.230ENSOMEG00000020705rps38088.276Oryzias_melastigma
ENSCSAVG00000003490-9285.294ENSOGAG00000005318RPS39386.404Otolemur_garnettii
ENSCSAVG00000003490-9285.654ENSOARG00000011523RPS38186.784Ovis_aries
ENSCSAVG00000003490-9275.847ENSPPAG00000039573-8476.889Pan_paniscus
ENSCSAVG00000003490-8880.444ENSPPAG00000033710-9080.444Pan_paniscus
ENSCSAVG00000003490-9285.654ENSPPAG00000029211RPS39386.784Pan_paniscus
ENSCSAVG00000003490-9285.654ENSPPRG00000021200-9386.784Panthera_pardus
ENSCSAVG00000003490-9285.654ENSPTIG00000012777-9386.784Panthera_tigris_altaica
ENSCSAVG00000003490-9285.654ENSPTRG00000048574RPS39386.784Pan_troglodytes
ENSCSAVG00000003490-9275.847ENSPTRG00000047374-8473.778Pan_troglodytes
ENSCSAVG00000003490-9279.325ENSPTRG00000015680-9478.974Pan_troglodytes
ENSCSAVG00000003490-7775.581ENSPANG00000032441-9077.632Papio_anubis
ENSCSAVG00000003490-8572.146ENSPANG00000033652-9273.039Papio_anubis
ENSCSAVG00000003490-9280.237ENSPANG00000016549-9286.822Papio_anubis
ENSCSAVG00000003490-9682.520ENSPKIG00000024046rps39486.087Paramormyrops_kingsleyae
ENSCSAVG00000003490-9285.654ENSPSIG00000008818-9387.225Pelodiscus_sinensis
ENSCSAVG00000003490-9584.016ENSPMGG00000012744rps39486.522Periophthalmus_magnuspinnatus
ENSCSAVG00000003490-9269.748ENSPEMG00000020704-9370.614Peromyscus_maniculatus_bairdii
ENSCSAVG00000003490-9262.712ENSPEMG00000022426-9362.996Peromyscus_maniculatus_bairdii
ENSCSAVG00000003490-9285.654ENSPEMG00000021741-9386.784Peromyscus_maniculatus_bairdii
ENSCSAVG00000003490-7588.542ENSPMAG00000007775-9688.542Petromyzon_marinus
ENSCSAVG00000003490-7076.111ENSPCIG00000030274-8876.111Phascolarctos_cinereus
ENSCSAVG00000003490-5481.481ENSPCIG00000022539-8581.481Phascolarctos_cinereus
ENSCSAVG00000003490-9284.810ENSPCIG00000024144-9386.784Phascolarctos_cinereus
ENSCSAVG00000003490-9683.333ENSPFOG00000013835rps39486.522Poecilia_formosa
ENSCSAVG00000003490-9683.333ENSPLAG00000005854rps39486.522Poecilia_latipinna
ENSCSAVG00000003490-9683.333ENSPMEG00000020999rps39486.522Poecilia_mexicana
ENSCSAVG00000003490-9683.333ENSPREG00000017536rps39486.522Poecilia_reticulata
ENSCSAVG00000003490-9285.654ENSPPYG00000003688RPS39386.784Pongo_abelii
ENSCSAVG00000003490-7184.699ENSPCAG00000003033-7186.127Procavia_capensis
ENSCSAVG00000003490-8876.652ENSPCOG00000026192-8878.295Propithecus_coquereli
ENSCSAVG00000003490-9263.713ENSPCOG00000024652-9164.122Propithecus_coquereli
ENSCSAVG00000003490-9285.654ENSPCOG00000028750RPS39386.784Propithecus_coquereli
ENSCSAVG00000003490-9281.857ENSPVAG00000011271-9382.819Pteropus_vampyrus
ENSCSAVG00000003490-9683.333ENSPNYG00000007419rps39486.522Pundamilia_nyererei
ENSCSAVG00000003490-9683.333ENSPNAG00000018641rps39486.522Pygocentrus_nattereri
ENSCSAVG00000003490-9282.700ENSRNOG00000007605AABR07052430.19383.700Rattus_norvegicus
ENSCSAVG00000003490-9285.654ENSRNOG00000017418Rps39386.784Rattus_norvegicus
ENSCSAVG00000003490-5172.464ENSRNOG00000056660AABR07025928.19272.464Rattus_norvegicus
ENSCSAVG00000003490-7066.298ENSRBIG00000012001-9666.298Rhinopithecus_bieti
ENSCSAVG00000003490-5287.218ENSRBIG00000042266-9387.218Rhinopithecus_bieti
ENSCSAVG00000003490-9268.354ENSRBIG00000033623-8977.083Rhinopithecus_bieti
ENSCSAVG00000003490-9274.790ENSRBIG00000040846-9576.163Rhinopithecus_bieti
ENSCSAVG00000003490-9285.654ENSRBIG00000044916RPS39386.784Rhinopithecus_bieti
ENSCSAVG00000003490-5284.962ENSRROG00000039976-9384.962Rhinopithecus_roxellana
ENSCSAVG00000003490-5075.714ENSRROG00000037141-8877.083Rhinopithecus_roxellana
ENSCSAVG00000003490-9085.714ENSRROG00000032977-9588.950Rhinopithecus_roxellana
ENSCSAVG00000003490-9285.654ENSRROG00000009870RPS39386.784Rhinopithecus_roxellana
ENSCSAVG00000003490-9266.245ENSRROG00000039887-9262.115Rhinopithecus_roxellana
ENSCSAVG00000003490-8967.100YNL178WRPS39068.950Saccharomyces_cerevisiae
ENSCSAVG00000003490-9285.654ENSSBOG00000021847-9386.784Saimiri_boliviensis_boliviensis
ENSCSAVG00000003490-8579.909ENSSBOG00000021803-8381.340Saimiri_boliviensis_boliviensis
ENSCSAVG00000003490-9164.681ENSSBOG00000024651-8164.889Saimiri_boliviensis_boliviensis
ENSCSAVG00000003490-9183.761ENSSHAG00000011198-9385.714Sarcophilus_harrisii
ENSCSAVG00000003490-9682.520ENSSFOG00015002290rps39485.652Scleropages_formosus
ENSCSAVG00000003490-9384.583ENSSMAG00000004341rps39386.522Scophthalmus_maximus
ENSCSAVG00000003490-9683.333ENSSDUG00000004327rps39486.522Seriola_dumerili
ENSCSAVG00000003490-5281.955ENSSLDG00000007403-9981.955Seriola_lalandi_dorsalis
ENSCSAVG00000003490-9683.333ENSSLDG00000018053rps39486.522Seriola_lalandi_dorsalis
ENSCSAVG00000003490-8886.344ENSSARG00000006979-9486.344Sorex_araneus
ENSCSAVG00000003490-8885.463ENSSPUG00000017181-9387.558Sphenodon_punctatus
ENSCSAVG00000003490-9683.740ENSSPAG00000022245rps39486.522Stegastes_partitus
ENSCSAVG00000003490-8462.500ENSSSCG00000036413-9262.500Sus_scrofa
ENSCSAVG00000003490-9285.654ENSSSCG00000014855RPS39386.784Sus_scrofa
ENSCSAVG00000003490-6280.000ENSTGUG00000013480-8889.552Taeniopygia_guttata
ENSCSAVG00000003490-9683.333ENSTRUG00000023549rps39486.522Takifugu_rubripes
ENSCSAVG00000003490-9285.654ENSTBEG00000007053-9386.784Tupaia_belangeri
ENSCSAVG00000003490-9285.654ENSTTRG00000005858RPS39386.784Tursiops_truncatus
ENSCSAVG00000003490-9285.654ENSUAMG00000021546-9386.784Ursus_americanus
ENSCSAVG00000003490-9285.654ENSUMAG00000010808-9386.784Ursus_maritimus
ENSCSAVG00000003490-9285.654ENSVPAG00000011615RPS39386.784Vicugna_pacos
ENSCSAVG00000003490-5965.979ENSVVUG00000018431-9069.231Vulpes_vulpes
ENSCSAVG00000003490-9285.654ENSVVUG00000024353-9386.784Vulpes_vulpes
ENSCSAVG00000003490-8986.147ENSXETG00000010729rps39486.147Xenopus_tropicalis
ENSCSAVG00000003490-9683.333ENSXCOG00000012468rps39486.522Xiphophorus_couchianus
ENSCSAVG00000003490-9683.333ENSXMAG00000004703rps39486.522Xiphophorus_maculatus

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