EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003527 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
369 bases
Position
chrreftig_21:518310-518678
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000005907LSMPF01423.221.2e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000005982-369-ENSCSAVP00000005907123 (aa)-H2YKQ5
Gene Model
Click here to download ENSCSAVG00000003527's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003527's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000003527-6735.227ENSCSAVG00000009542-7634.146
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003527-9182.143ENSG00000125743SNRPD29582.143Homo_sapiens
ENSCSAVG00000003527-9182.143ENSAPOG00000012310snrpd29582.143Acanthochromis_polyacanthus
ENSCSAVG00000003527-9081.982ENSAMEG00000000818-9581.982Ailuropoda_melanoleuca
ENSCSAVG00000003527-7287.640ENSACIG00000022689snrpd28287.640Amphilophus_citrinellus
ENSCSAVG00000003527-9182.143ENSAOCG00000024413snrpd29582.143Amphiprion_ocellaris
ENSCSAVG00000003527-9182.143ENSAPEG00000021711snrpd29582.143Amphiprion_percula
ENSCSAVG00000003527-9280.531ENSATEG00000000868snrpd29480.531Anabas_testudineus
ENSCSAVG00000003527-9081.982ENSACAG00000016779-9481.982Anolis_carolinensis
ENSCSAVG00000003527-9173.214ENSANAG00000018193-9574.107Aotus_nancymaae
ENSCSAVG00000003527-9180.357ENSANAG00000003063-9580.357Aotus_nancymaae
ENSCSAVG00000003527-9080.180ENSANAG00000001612-9380.180Aotus_nancymaae
ENSCSAVG00000003527-9182.143ENSANAG00000017079-9582.143Aotus_nancymaae
ENSCSAVG00000003527-9182.143ENSACLG00000001746snrpd29582.143Astatotilapia_calliptera
ENSCSAVG00000003527-9182.143ENSAMXG00000033526snrpd29582.143Astyanax_mexicanus
ENSCSAVG00000003527-9182.143ENSBTAG00000012177SNRPD29582.143Bos_taurus
ENSCSAVG00000003527-9179.464WBGene00004917snr-49579.464Caenorhabditis_elegans
ENSCSAVG00000003527-9180.357ENSCJAG00000041687-9580.357Callithrix_jacchus
ENSCSAVG00000003527-9180.357ENSCJAG00000047157-9580.357Callithrix_jacchus
ENSCSAVG00000003527-9182.143ENSCJAG00000012413-9582.143Callithrix_jacchus
ENSCSAVG00000003527-9182.143ENSCJAG00000019291-9582.143Callithrix_jacchus
ENSCSAVG00000003527-9182.143ENSCJAG00000044723-9582.143Callithrix_jacchus
ENSCSAVG00000003527-9180.357ENSCJAG00000044646-9580.357Callithrix_jacchus
ENSCSAVG00000003527-9179.464ENSCJAG00000047147-9579.464Callithrix_jacchus
ENSCSAVG00000003527-9073.874ENSCAFG00000000634-9473.874Canis_familiaris
ENSCSAVG00000003527-9182.143ENSCAFG00000004403SNRPD29582.143Canis_familiaris
ENSCSAVG00000003527-8583.654ENSCAFG00020003532-9383.654Canis_lupus_dingo
ENSCSAVG00000003527-9073.874ENSCAFG00020002921-9473.874Canis_lupus_dingo
ENSCSAVG00000003527-8784.112ENSCHIG00000015755-9084.112Capra_hircus
ENSCSAVG00000003527-9182.143ENSTSYG00000011207-9582.143Carlito_syrichta
ENSCSAVG00000003527-8272.277ENSTSYG00000031156-8768.317Carlito_syrichta
ENSCSAVG00000003527-9170.536ENSCAPG00000006559-9571.429Cavia_aperea
ENSCSAVG00000003527-9081.982ENSCAPG00000011695-9381.982Cavia_aperea
ENSCSAVG00000003527-9174.107ENSCPOG00000025735-9574.107Cavia_porcellus
ENSCSAVG00000003527-9182.143ENSCPOG00000035154-9582.143Cavia_porcellus
ENSCSAVG00000003527-9181.250ENSCCAG00000011183-9581.250Cebus_capucinus
ENSCSAVG00000003527-9166.071ENSCCAG00000030191-9466.071Cebus_capucinus
ENSCSAVG00000003527-9178.571ENSCCAG00000012011-9578.571Cebus_capucinus
ENSCSAVG00000003527-9160.714ENSCCAG00000020956-9360.714Cebus_capucinus
ENSCSAVG00000003527-9182.143ENSCCAG00000035396SNRPD29582.143Cebus_capucinus
ENSCSAVG00000003527-8481.553ENSCATG00000040410-9980.303Cercocebus_atys
ENSCSAVG00000003527-9180.357ENSCATG00000031591-9580.357Cercocebus_atys
ENSCSAVG00000003527-9181.250ENSCATG00000005272-9581.250Cercocebus_atys
ENSCSAVG00000003527-9166.071ENSCLAG00000001183-9566.071Chinchilla_lanigera
ENSCSAVG00000003527-8572.115ENSCLAG00000017381-9472.115Chinchilla_lanigera
ENSCSAVG00000003527-9182.143ENSCLAG00000000931-9582.143Chinchilla_lanigera
ENSCSAVG00000003527-9182.143ENSCSAG00000003157SNRPD29582.143Chlorocebus_sabaeus
ENSCSAVG00000003527-9182.143ENSCPBG00000007259SNRPD29582.143Chrysemys_picta_bellii
ENSCSAVG00000003527-9198.214ENSCING00000020031-9598.214Ciona_intestinalis
ENSCSAVG00000003527-9181.250ENSCANG00000038535-9581.250Colobus_angolensis_palliatus
ENSCSAVG00000003527-9163.393ENSCANG00000035956-9463.393Colobus_angolensis_palliatus
ENSCSAVG00000003527-9170.536ENSCGRG00001003078-9570.536Cricetulus_griseus_chok1gshd
ENSCSAVG00000003527-9077.477ENSCGRG00000011635-9577.477Cricetulus_griseus_crigri
ENSCSAVG00000003527-9182.143ENSCSEG00000002230snrpd29582.143Cynoglossus_semilaevis
ENSCSAVG00000003527-9081.982ENSCVAG00000010204SNRPD28884.112Cyprinodon_variegatus
ENSCSAVG00000003527-9182.143ENSCVAG00000014834snrpd29582.143Cyprinodon_variegatus
ENSCSAVG00000003527-9182.143ENSDARG00000040440snrpd29582.143Danio_rerio
ENSCSAVG00000003527-9479.310ENSDNOG00000002365-9179.310Dasypus_novemcinctus
ENSCSAVG00000003527-9182.143ENSDORG00000001729Snrpd29582.143Dipodomys_ordii
ENSCSAVG00000003527-8982.727FBgn0261789SmD29084.112Drosophila_melanogaster
ENSCSAVG00000003527-9164.286ENSETEG00000002893-9561.607Echinops_telfairi
ENSCSAVG00000003527-8885.185ENSEBUG00000002144snrpd29085.981Eptatretus_burgeri
ENSCSAVG00000003527-8466.990ENSEASG00005016910-7764.078Equus_asinus_asinus
ENSCSAVG00000003527-9182.143ENSEASG00005014210-9582.143Equus_asinus_asinus
ENSCSAVG00000003527-8881.481ENSECAG00000007824SNRPD29083.654Equus_caballus
ENSCSAVG00000003527-9976.613ENSELUG00000020393snrpd27076.613Esox_lucius
ENSCSAVG00000003527-8675.472ENSFCAG00000024879-6975.472Felis_catus
ENSCSAVG00000003527-9182.143ENSFCAG00000022530-9582.143Felis_catus
ENSCSAVG00000003527-9182.143ENSFDAG00000015792SNRPD29582.143Fukomys_damarensis
ENSCSAVG00000003527-9182.143ENSFHEG00000015591snrpd29582.143Fundulus_heteroclitus
ENSCSAVG00000003527-9081.982ENSGMOG00000013857snrpd29184.112Gadus_morhua
ENSCSAVG00000003527-9182.143ENSGAFG00000001246snrpd29582.143Gambusia_affinis
ENSCSAVG00000003527-9081.982ENSGACG00000006697snrpd29184.112Gasterosteus_aculeatus
ENSCSAVG00000003527-7279.545ENSGAGG00000017944SNRPD25482.051Gopherus_agassizii
ENSCSAVG00000003527-9182.143ENSGGOG00000002350SNRPD29582.143Gorilla_gorilla
ENSCSAVG00000003527-9182.143ENSHBUG00000004073snrpd29582.143Haplochromis_burtoni
ENSCSAVG00000003527-9165.179ENSHGLG00000017154-9565.179Heterocephalus_glaber_female
ENSCSAVG00000003527-9182.143ENSHGLG00000015364SNRPD29582.143Heterocephalus_glaber_female
ENSCSAVG00000003527-9182.143ENSHGLG00100015694SNRPD29582.143Heterocephalus_glaber_male
ENSCSAVG00000003527-9177.679ENSHGLG00100020606-6177.679Heterocephalus_glaber_male
ENSCSAVG00000003527-9181.250ENSHCOG00000010973snrpd29581.250Hippocampus_comes
ENSCSAVG00000003527-9182.143ENSIPUG00000001053snrpd29582.143Ictalurus_punctatus
ENSCSAVG00000003527-9182.143ENSSTOG00000024377SNRPD29582.143Ictidomys_tridecemlineatus
ENSCSAVG00000003527-9182.143ENSJJAG00000002622Snrpd29582.143Jaculus_jaculus
ENSCSAVG00000003527-9182.143ENSKMAG00000001539snrpd29582.143Kryptolebias_marmoratus
ENSCSAVG00000003527-9183.036ENSLBEG00000019436snrpd29583.036Labrus_bergylta
ENSCSAVG00000003527-7287.640ENSLACG00000004720SNRPD28287.640Latimeria_chalumnae
ENSCSAVG00000003527-9182.143ENSLOCG00000014824snrpd29582.143Lepisosteus_oculatus
ENSCSAVG00000003527-9081.982ENSLAFG00000004205-9481.982Loxodonta_africana
ENSCSAVG00000003527-9181.250ENSMFAG00000020148-9581.250Macaca_fascicularis
ENSCSAVG00000003527-9179.464ENSMFAG00000009957-9579.464Macaca_fascicularis
ENSCSAVG00000003527-9182.143ENSMFAG00000045767-9582.143Macaca_fascicularis
ENSCSAVG00000003527-9175.000ENSMMUG00000030518-9575.000Macaca_mulatta
ENSCSAVG00000003527-9181.250ENSMMUG00000032370-9581.250Macaca_mulatta
ENSCSAVG00000003527-9179.464ENSMMUG00000032525-9579.464Macaca_mulatta
ENSCSAVG00000003527-9178.571ENSMNEG00000010649-9578.571Macaca_nemestrina
ENSCSAVG00000003527-9181.250ENSMNEG00000021599-9581.250Macaca_nemestrina
ENSCSAVG00000003527-7976.289ENSMNEG00000039787-7578.652Macaca_nemestrina
ENSCSAVG00000003527-9180.357ENSMLEG00000008325-9580.357Mandrillus_leucophaeus
ENSCSAVG00000003527-9182.143ENSMAMG00000013925snrpd29582.143Mastacembelus_armatus
ENSCSAVG00000003527-9182.143ENSMZEG00005013054snrpd29582.143Maylandia_zebra
ENSCSAVG00000003527-9182.143ENSMAUG00000018849Snrpd29582.143Mesocricetus_auratus
ENSCSAVG00000003527-9182.143ENSMICG00000031545SNRPD29582.143Microcebus_murinus
ENSCSAVG00000003527-9176.786ENSMOCG00000017135-9576.786Microtus_ochrogaster
ENSCSAVG00000003527-9182.143ENSMOCG00000017080Snrpd29582.143Microtus_ochrogaster
ENSCSAVG00000003527-9183.036ENSMMOG00000004936snrpd29583.036Mola_mola
ENSCSAVG00000003527-9081.982ENSMODG00000021539-9481.982Monodelphis_domestica
ENSCSAVG00000003527-9182.143ENSMALG00000010608snrpd29582.143Monopterus_albus
ENSCSAVG00000003527-9182.143MGP_CAROLIEiJ_G0029275-9582.143Mus_caroli
ENSCSAVG00000003527-9176.786MGP_CAROLIEiJ_G0018529-9576.786Mus_caroli
ENSCSAVG00000003527-9182.143ENSMUSG00000040824Snrpd29582.143Mus_musculus
ENSCSAVG00000003527-9182.143MGP_PahariEiJ_G0021135-9582.143Mus_pahari
ENSCSAVG00000003527-9171.429MGP_SPRETEiJ_G0019409-9572.321Mus_spretus
ENSCSAVG00000003527-9182.143MGP_SPRETEiJ_G0030359Snrpd29582.143Mus_spretus
ENSCSAVG00000003527-9081.982ENSMPUG00000005733-8884.112Mustela_putorius_furo
ENSCSAVG00000003527-9176.786ENSMLUG00000025417-9576.786Myotis_lucifugus
ENSCSAVG00000003527-8768.224ENSMLUG00000026025-9168.224Myotis_lucifugus
ENSCSAVG00000003527-8678.302ENSMLUG00000030461-9178.302Myotis_lucifugus
ENSCSAVG00000003527-9081.982ENSMLUG00000001306-9581.982Myotis_lucifugus
ENSCSAVG00000003527-9080.180ENSMLUG00000026353-9280.180Myotis_lucifugus
ENSCSAVG00000003527-8571.429ENSNGAG00000013160-6867.619Nannospalax_galili
ENSCSAVG00000003527-9182.143ENSNGAG00000010411-9582.143Nannospalax_galili
ENSCSAVG00000003527-9182.143ENSNBRG00000000805snrpd29582.143Neolamprologus_brichardi
ENSCSAVG00000003527-9182.143ENSNLEG00000002274SNRPD29582.143Nomascus_leucogenys
ENSCSAVG00000003527-9081.982ENSMEUG00000012031-9581.982Notamacropus_eugenii
ENSCSAVG00000003527-9181.250ENSOPRG00000008321-9581.250Ochotona_princeps
ENSCSAVG00000003527-9080.180ENSODEG00000012799-8782.243Octodon_degus
ENSCSAVG00000003527-9182.143ENSODEG00000020139-9582.143Octodon_degus
ENSCSAVG00000003527-9179.464ENSODEG00000020094-9579.464Octodon_degus
ENSCSAVG00000003527-9181.250ENSODEG00000020096-9581.250Octodon_degus
ENSCSAVG00000003527-9182.143ENSODEG00000008857-9582.143Octodon_degus
ENSCSAVG00000003527-5478.788ENSODEG00000011751-6278.788Octodon_degus
ENSCSAVG00000003527-9181.250ENSODEG00000019447-9581.250Octodon_degus
ENSCSAVG00000003527-5077.419ENSODEG00000008077-8377.419Octodon_degus
ENSCSAVG00000003527-9182.143ENSONIG00000005406snrpd29582.143Oreochromis_niloticus
ENSCSAVG00000003527-9081.982ENSOANG00000000813-9081.982Ornithorhynchus_anatinus
ENSCSAVG00000003527-9182.143ENSOCUG00000022402SNRPD29582.143Oryctolagus_cuniculus
ENSCSAVG00000003527-9182.143ENSORLG00000026725snrpd29582.143Oryzias_latipes
ENSCSAVG00000003527-9182.143ENSORLG00020011312snrpd29582.143Oryzias_latipes_hni
ENSCSAVG00000003527-9182.143ENSORLG00015019579snrpd29582.143Oryzias_latipes_hsok
ENSCSAVG00000003527-9182.143ENSOMEG00000012661snrpd29582.143Oryzias_melastigma
ENSCSAVG00000003527-9081.982ENSOGAG00000030128-9581.982Otolemur_garnettii
ENSCSAVG00000003527-9081.982ENSOARG00000010203-9481.982Ovis_aries
ENSCSAVG00000003527-9179.464ENSOARG00000016742-9579.464Ovis_aries
ENSCSAVG00000003527-9182.143ENSPPAG00000038031SNRPD29582.143Pan_paniscus
ENSCSAVG00000003527-9182.143ENSPPRG00000012309SNRPD29582.143Panthera_pardus
ENSCSAVG00000003527-8773.832ENSPPRG00000000040-8769.159Panthera_pardus
ENSCSAVG00000003527-7951.546ENSPTIG00000000935-6969.697Panthera_tigris_altaica
ENSCSAVG00000003527-7287.640ENSPTIG00000006666-8287.640Panthera_tigris_altaica
ENSCSAVG00000003527-9182.143ENSPTRG00000011162SNRPD29582.143Pan_troglodytes
ENSCSAVG00000003527-9182.143ENSPANG00000017743-9582.143Papio_anubis
ENSCSAVG00000003527-9182.143ENSPANG00000008802-9582.143Papio_anubis
ENSCSAVG00000003527-9182.143ENSPKIG00000001110snrpd29582.143Paramormyrops_kingsleyae
ENSCSAVG00000003527-7287.640ENSPSIG00000015823-8287.640Pelodiscus_sinensis
ENSCSAVG00000003527-9081.081ENSPMGG00000016148snrpd29183.178Periophthalmus_magnuspinnatus
ENSCSAVG00000003527-9179.464ENSPEMG00000009398-9579.464Peromyscus_maniculatus_bairdii
ENSCSAVG00000003527-9081.982ENSPEMG00000004117-9381.982Peromyscus_maniculatus_bairdii
ENSCSAVG00000003527-9182.143ENSPCIG00000022986SNRPD29582.143Phascolarctos_cinereus
ENSCSAVG00000003527-9182.143ENSPFOG00000016809snrpd29582.143Poecilia_formosa
ENSCSAVG00000003527-9182.143ENSPLAG00000010725snrpd29582.143Poecilia_latipinna
ENSCSAVG00000003527-9182.143ENSPMEG00000000107snrpd29582.143Poecilia_mexicana
ENSCSAVG00000003527-8683.962ENSPREG00000004078snrpd29283.962Poecilia_reticulata
ENSCSAVG00000003527-9182.143ENSPPYG00000010129SNRPD29582.143Pongo_abelii
ENSCSAVG00000003527-9182.143ENSPCAG00000016818SNRPD29582.143Procavia_capensis
ENSCSAVG00000003527-9182.143ENSPCOG00000028811-9582.143Propithecus_coquereli
ENSCSAVG00000003527-9182.143ENSPCOG00000001429-9582.143Propithecus_coquereli
ENSCSAVG00000003527-9081.982ENSPVAG00000001345-9581.982Pteropus_vampyrus
ENSCSAVG00000003527-9182.143ENSPNYG00000011826snrpd29582.143Pundamilia_nyererei
ENSCSAVG00000003527-9182.143ENSPNAG00000025554snrpd29582.143Pygocentrus_nattereri
ENSCSAVG00000003527-9182.143ENSRNOG00000015844Snrpd29582.143Rattus_norvegicus
ENSCSAVG00000003527-9179.464ENSRNOG00000048758Snrpd2l9579.464Rattus_norvegicus
ENSCSAVG00000003527-9173.214ENSRBIG00000032406-9474.107Rhinopithecus_bieti
ENSCSAVG00000003527-9165.179ENSRBIG00000032742-9566.964Rhinopithecus_bieti
ENSCSAVG00000003527-9182.143ENSRBIG00000040969SNRPD29582.143Rhinopithecus_bieti
ENSCSAVG00000003527-9172.321ENSRROG00000030974-9473.214Rhinopithecus_roxellana
ENSCSAVG00000003527-9182.143ENSRROG00000034764SNRPD29582.143Rhinopithecus_roxellana
ENSCSAVG00000003527-8660.377YLR275WSMD29058.491Saccharomyces_cerevisiae
ENSCSAVG00000003527-9182.143ENSSBOG00000035164-9582.143Saimiri_boliviensis_boliviensis
ENSCSAVG00000003527-9180.357ENSSBOG00000019992-7780.357Saimiri_boliviensis_boliviensis
ENSCSAVG00000003527-9182.143ENSSBOG00000017764-9582.143Saimiri_boliviensis_boliviensis
ENSCSAVG00000003527-9182.143ENSSBOG00000009827-9582.143Saimiri_boliviensis_boliviensis
ENSCSAVG00000003527-9081.081ENSSHAG00000003772-9481.081Sarcophilus_harrisii
ENSCSAVG00000003527-9182.143ENSSFOG00015022535snrpd29582.143Scleropages_formosus
ENSCSAVG00000003527-9182.143ENSSFOG00015016069-9582.143Scleropages_formosus
ENSCSAVG00000003527-9181.250ENSSMAG00000003422snrpd29581.250Scophthalmus_maximus
ENSCSAVG00000003527-9182.143ENSSDUG00000005519snrpd29582.143Seriola_dumerili
ENSCSAVG00000003527-9182.143ENSSLDG00000009397snrpd29582.143Seriola_lalandi_dorsalis
ENSCSAVG00000003527-9081.982ENSSARG00000009167-9581.982Sorex_araneus
ENSCSAVG00000003527-9182.143ENSSPAG00000015767snrpd29582.143Stegastes_partitus
ENSCSAVG00000003527-6760.920ENSSSCG00000040417-7562.667Sus_scrofa
ENSCSAVG00000003527-9182.143ENSSSCG00000033500SNRPD29582.143Sus_scrofa
ENSCSAVG00000003527-9182.143ENSTRUG00000023014snrpd29582.143Takifugu_rubripes
ENSCSAVG00000003527-8182.000ENSTNIG00000011736snrpd29282.000Tetraodon_nigroviridis
ENSCSAVG00000003527-9182.143ENSTBEG00000001752SNRPD29582.143Tupaia_belangeri
ENSCSAVG00000003527-9182.143ENSTTRG00000014299-9582.143Tursiops_truncatus
ENSCSAVG00000003527-7566.304ENSUAMG00000022454-7566.304Ursus_americanus
ENSCSAVG00000003527-9182.143ENSUAMG00000023173SNRPD29582.143Ursus_americanus
ENSCSAVG00000003527-9182.143ENSUMAG00000023685-9582.143Ursus_maritimus
ENSCSAVG00000003527-7566.304ENSUMAG00000001547-7566.304Ursus_maritimus
ENSCSAVG00000003527-9175.000ENSVVUG00000016748-9575.000Vulpes_vulpes
ENSCSAVG00000003527-8583.654ENSVVUG00000003181-9383.654Vulpes_vulpes
ENSCSAVG00000003527-9081.982ENSXETG00000002173snrpd29581.982Xenopus_tropicalis
ENSCSAVG00000003527-9081.982ENSXCOG00000001082snrpd28584.112Xiphophorus_couchianus
ENSCSAVG00000003527-9182.143ENSXMAG00000001018snrpd29582.143Xiphophorus_maculatus

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