EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003607 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2261 bases
Position: chrreftig_13:75584-77844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006042	FtsJ	PF01728.19	2.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006119	-	2154	-	ENSCSAVP00000006042	718 (aa)	-	H2YL40

Gene Model

Click here to download ENSCSAVG00000003607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003607	-	68	57.053	ENSG00000108592	FTSJ3	100	75.758	Homo_sapiens
ENSCSAVG00000003607	-	71	55.109	ENSAPOG00000005543	ftsj3	60	57.258	Acanthochromis_polyacanthus
ENSCSAVG00000003607	-	84	56.740	ENSAMEG00000003148	FTSJ3	58	57.003	Ailuropoda_melanoleuca
ENSCSAVG00000003607	-	70	58.434	ENSAOCG00000023196	ftsj3	58	60.458	Amphiprion_ocellaris
ENSCSAVG00000003607	-	71	58.735	ENSAPEG00000004250	ftsj3	57	60.784	Amphiprion_percula
ENSCSAVG00000003607	-	61	56.299	ENSATEG00000010069	ftsj3	55	56.846	Anabas_testudineus
ENSCSAVG00000003607	-	82	57.542	ENSAPLG00000010362	-	55	57.459	Anas_platyrhynchos
ENSCSAVG00000003607	-	70	52.727	ENSACAG00000017930	FTSJ3	51	57.459	Anolis_carolinensis
ENSCSAVG00000003607	-	83	56.426	ENSANAG00000033774	FTSJ3	57	56.678	Aotus_nancymaae
ENSCSAVG00000003607	-	97	61.212	ENSAMXG00000021571	ftsj3	55	63.399	Astyanax_mexicanus
ENSCSAVG00000003607	-	83	57.367	ENSBTAG00000021060	FTSJ3	58	57.655	Bos_taurus
ENSCSAVG00000003607	-	99	36.485	WBGene00019168	H06I04.3	73	37.833	Caenorhabditis_elegans
ENSCSAVG00000003607	-	84	56.193	ENSCJAG00000019631	FTSJ3	58	56.678	Callithrix_jacchus
ENSCSAVG00000003607	-	84	57.009	ENSCAFG00000012770	FTSJ3	57	57.516	Canis_familiaris
ENSCSAVG00000003607	-	84	57.367	ENSCAFG00020026630	FTSJ3	58	57.655	Canis_lupus_dingo
ENSCSAVG00000003607	-	83	57.680	ENSCHIG00000025676	FTSJ3	59	57.980	Capra_hircus
ENSCSAVG00000003607	-	79	51.429	ENSTSYG00000001393	FTSJ3	56	52.486	Carlito_syrichta
ENSCSAVG00000003607	-	63	55.618	ENSCAPG00000016654	FTSJ3	71	55.801	Cavia_aperea
ENSCSAVG00000003607	-	97	41.537	ENSCPOG00000011384	FTSJ3	58	57.655	Cavia_porcellus
ENSCSAVG00000003607	-	68	56.740	ENSCCAG00000023533	-	57	57.003	Cebus_capucinus
ENSCSAVG00000003607	-	68	56.426	ENSCATG00000018510	FTSJ3	57	56.863	Cercocebus_atys
ENSCSAVG00000003607	-	83	57.009	ENSCLAG00000003222	FTSJ3	58	57.655	Chinchilla_lanigera
ENSCSAVG00000003607	-	90	54.749	ENSCSAG00000003921	FTSJ3	57	57.190	Chlorocebus_sabaeus
ENSCSAVG00000003607	-	86	56.983	ENSCPBG00000010032	FTSJ3	74	57.980	Chrysemys_picta_bellii
ENSCSAVG00000003607	-	99	73.861	ENSCING00000025069	-	99	73.144	Ciona_intestinalis
ENSCSAVG00000003607	-	68	56.740	ENSCANG00000042921	FTSJ3	57	57.190	Colobus_angolensis_palliatus
ENSCSAVG00000003607	-	97	41.425	ENSCGRG00001018068	FTSJ3	58	57.980	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003607	-	97	41.425	ENSCGRG00000010648	FTSJ3	58	57.980	Cricetulus_griseus_crigri
ENSCSAVG00000003607	-	70	58.133	ENSCSEG00000013468	ftsj3	55	60.714	Cynoglossus_semilaevis
ENSCSAVG00000003607	-	71	58.735	ENSCVAG00000007484	ftsj3	57	60.714	Cyprinodon_variegatus
ENSCSAVG00000003607	-	94	59.337	ENSDARG00000104938	ftsj3	57	60.784	Danio_rerio
ENSCSAVG00000003607	-	69	56.698	ENSDNOG00000002392	FTSJ3	57	57.190	Dasypus_novemcinctus
ENSCSAVG00000003607	-	84	57.367	ENSDORG00000004200	Ftsj3	58	57.655	Dipodomys_ordii
ENSCSAVG00000003607	-	97	37.961	FBgn0030720	CG8939	58	54.516	Drosophila_melanogaster
ENSCSAVG00000003607	-	84	57.009	ENSETEG00000019228	FTSJ3	57	57.003	Echinops_telfairi
ENSCSAVG00000003607	-	99	41.587	ENSEBUG00000007828	ftsj3	58	57.980	Eptatretus_burgeri
ENSCSAVG00000003607	-	99	43.073	ENSEASG00005013565	FTSJ3	76	57.655	Equus_asinus_asinus
ENSCSAVG00000003607	-	97	41.566	ENSECAG00000011995	FTSJ3	58	57.655	Equus_caballus
ENSCSAVG00000003607	-	98	58.255	ENSELUG00000013501	ftsj3	55	59.091	Esox_lucius
ENSCSAVG00000003607	-	69	56.426	ENSFCAG00000013983	FTSJ3	58	56.678	Felis_catus
ENSCSAVG00000003607	-	85	55.786	ENSFALG00000013635	FTSJ3	75	59.016	Ficedula_albicollis
ENSCSAVG00000003607	-	97	41.978	ENSFDAG00000010274	FTSJ3	58	58.252	Fukomys_damarensis
ENSCSAVG00000003607	-	85	58.434	ENSFHEG00000007639	ftsj3	58	60.458	Fundulus_heteroclitus
ENSCSAVG00000003607	-	85	57.831	ENSGALG00000032993	FTSJ3	58	59.935	Gallus_gallus
ENSCSAVG00000003607	-	98	42.303	ENSGAGG00000006236	FTSJ3	58	57.980	Gopherus_agassizii
ENSCSAVG00000003607	-	83	57.053	ENSGGOG00000006794	FTSJ3	57	57.329	Gorilla_gorilla
ENSCSAVG00000003607	-	99	42.080	ENSHBUG00000022331	ftsj3	56	60.784	Haplochromis_burtoni
ENSCSAVG00000003607	-	97	41.687	ENSHGLG00000012282	FTSJ3	58	57.329	Heterocephalus_glaber_female
ENSCSAVG00000003607	-	98	41.757	ENSHGLG00100003578	FTSJ3	58	57.329	Heterocephalus_glaber_male
ENSCSAVG00000003607	-	83	58.735	ENSHCOG00000018770	ftsj3	56	60.261	Hippocampus_comes
ENSCSAVG00000003607	-	87	59.940	ENSIPUG00000024942	ftsj3	55	61.765	Ictalurus_punctatus
ENSCSAVG00000003607	-	97	43.451	ENSSTOG00000021265	FTSJ3	58	57.655	Ictidomys_tridecemlineatus
ENSCSAVG00000003607	-	97	41.026	ENSJJAG00000012822	Ftsj3	58	57.003	Jaculus_jaculus
ENSCSAVG00000003607	-	71	59.036	ENSKMAG00000021997	ftsj3	56	61.039	Kryptolebias_marmoratus
ENSCSAVG00000003607	-	68	58.934	ENSLBEG00000027142	ftsj3	57	59.804	Labrus_bergylta
ENSCSAVG00000003607	-	67	58.255	ENSLOCG00000008979	ftsj3	54	58.900	Lepisosteus_oculatus
ENSCSAVG00000003607	-	91	52.941	ENSLAFG00000003252	FTSJ3	57	57.705	Loxodonta_africana
ENSCSAVG00000003607	-	68	56.740	ENSMFAG00000003764	FTSJ3	57	57.190	Macaca_fascicularis
ENSCSAVG00000003607	-	83	56.740	ENSMMUG00000016768	FTSJ3	58	57.190	Macaca_mulatta
ENSCSAVG00000003607	-	68	56.740	ENSMNEG00000029254	FTSJ3	57	57.190	Macaca_nemestrina
ENSCSAVG00000003607	-	68	56.740	ENSMLEG00000029091	FTSJ3	57	57.190	Mandrillus_leucophaeus
ENSCSAVG00000003607	-	71	58.735	ENSMZEG00005001992	ftsj3	56	60.458	Maylandia_zebra
ENSCSAVG00000003607	-	70	57.229	ENSMGAG00000000953	FTSJ3	54	59.283	Meleagris_gallopavo
ENSCSAVG00000003607	-	97	42.086	ENSMAUG00000015688	Ftsj3	59	57.980	Mesocricetus_auratus
ENSCSAVG00000003607	-	83	57.367	ENSMICG00000045996	FTSJ3	57	57.655	Microcebus_murinus
ENSCSAVG00000003607	-	99	41.869	ENSMOCG00000017809	Ftsj3	59	57.980	Microtus_ochrogaster
ENSCSAVG00000003607	-	70	56.725	ENSMMOG00000019522	ftsj3	54	57.962	Mola_mola
ENSCSAVG00000003607	-	99	42.193	ENSMODG00000009901	FTSJ3	57	57.329	Monodelphis_domestica
ENSCSAVG00000003607	-	97	41.437	MGP_CAROLIEiJ_G0017315	Ftsj3	58	57.980	Mus_caroli
ENSCSAVG00000003607	-	97	41.268	ENSMUSG00000020706	Ftsj3	58	57.980	Mus_musculus
ENSCSAVG00000003607	-	97	41.338	MGP_PahariEiJ_G0018445	Ftsj3	57	57.980	Mus_pahari
ENSCSAVG00000003607	-	97	41.317	MGP_SPRETEiJ_G0018159	Ftsj3	58	57.980	Mus_spretus
ENSCSAVG00000003607	-	84	57.009	ENSMPUG00000014911	FTSJ3	58	57.655	Mustela_putorius_furo
ENSCSAVG00000003607	-	69	57.053	ENSMLUG00000011667	FTSJ3	57	57.329	Myotis_lucifugus
ENSCSAVG00000003607	-	98	41.127	ENSNGAG00000005899	Ftsj3	58	57.980	Nannospalax_galili
ENSCSAVG00000003607	-	83	57.053	ENSNLEG00000004188	FTSJ3	57	57.329	Nomascus_leucogenys
ENSCSAVG00000003607	-	85	51.097	ENSMEUG00000013252	FTSJ3	58	54.396	Notamacropus_eugenii
ENSCSAVG00000003607	-	68	57.367	ENSOPRG00000014985	FTSJ3	58	57.655	Ochotona_princeps
ENSCSAVG00000003607	-	99	42.293	ENSODEG00000008167	FTSJ3	58	57.655	Octodon_degus
ENSCSAVG00000003607	-	98	41.775	ENSONIG00000001654	ftsj3	56	60.784	Oreochromis_niloticus
ENSCSAVG00000003607	-	99	42.354	ENSOCUG00000004319	FTSJ3	59	57.329	Oryctolagus_cuniculus
ENSCSAVG00000003607	-	71	59.036	ENSORLG00000005910	ftsj3	58	60.784	Oryzias_latipes
ENSCSAVG00000003607	-	71	59.036	ENSORLG00020021255	ftsj3	63	60.784	Oryzias_latipes_hni
ENSCSAVG00000003607	-	71	59.036	ENSORLG00015018416	ftsj3	58	60.784	Oryzias_latipes_hsok
ENSCSAVG00000003607	-	71	57.602	ENSOMEG00000014432	ftsj3	62	60.784	Oryzias_melastigma
ENSCSAVG00000003607	-	69	57.053	ENSOGAG00000032479	FTSJ3	58	57.329	Otolemur_garnettii
ENSCSAVG00000003607	-	83	57.680	ENSOARG00000013637	FTSJ3	58	57.980	Ovis_aries
ENSCSAVG00000003607	-	68	57.367	ENSPPAG00000027297	FTSJ3	57	57.003	Pan_paniscus
ENSCSAVG00000003607	-	84	56.426	ENSPPRG00000003042	FTSJ3	58	56.678	Panthera_pardus
ENSCSAVG00000003607	-	84	55.247	ENSPTIG00000012576	FTSJ3	57	56.536	Panthera_tigris_altaica
ENSCSAVG00000003607	-	68	57.053	ENSPTRG00000009524	FTSJ3	57	57.329	Pan_troglodytes
ENSCSAVG00000003607	-	68	56.740	ENSPANG00000020978	FTSJ3	57	57.190	Papio_anubis
ENSCSAVG00000003607	-	97	40.453	ENSPKIG00000012838	ftsj3	60	59.477	Paramormyrops_kingsleyae
ENSCSAVG00000003607	-	97	42.454	ENSPEMG00000000248	Ftsj3	59	57.980	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003607	-	99	40.947	ENSPCIG00000009088	FTSJ3	58	57.003	Phascolarctos_cinereus
ENSCSAVG00000003607	-	71	58.735	ENSPFOG00000023101	ftsj3	56	60.784	Poecilia_formosa
ENSCSAVG00000003607	-	71	58.434	ENSPLAG00000003846	ftsj3	56	60.458	Poecilia_latipinna
ENSCSAVG00000003607	-	71	58.735	ENSPMEG00000012692	ftsj3	56	60.784	Poecilia_mexicana
ENSCSAVG00000003607	-	71	58.735	ENSPREG00000014874	ftsj3	56	60.784	Poecilia_reticulata
ENSCSAVG00000003607	-	84	57.053	ENSPPYG00000008532	FTSJ3	58	57.329	Pongo_abelii
ENSCSAVG00000003607	-	99	40.118	ENSPCAG00000002560	FTSJ3	58	56.026	Procavia_capensis
ENSCSAVG00000003607	-	83	57.009	ENSPCOG00000023921	FTSJ3	58	57.329	Propithecus_coquereli
ENSCSAVG00000003607	-	69	56.740	ENSPVAG00000000162	FTSJ3	57	57.003	Pteropus_vampyrus
ENSCSAVG00000003607	-	93	58.521	ENSPNAG00000022474	ftsj3	54	60.702	Pygocentrus_nattereri
ENSCSAVG00000003607	-	98	41.827	ENSRNOG00000009857	Ftsj3	58	57.980	Rattus_norvegicus
ENSCSAVG00000003607	-	68	56.740	ENSRBIG00000039259	FTSJ3	57	57.190	Rhinopithecus_bieti
ENSCSAVG00000003607	-	68	56.740	ENSRROG00000045002	FTSJ3	57	57.190	Rhinopithecus_roxellana
ENSCSAVG00000003607	-	73	49.226	YCL054W	-	58	48.734	Saccharomyces_cerevisiae
ENSCSAVG00000003607	-	84	57.053	ENSSBOG00000031794	FTSJ3	54	57.329	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003607	-	99	41.637	ENSSHAG00000013062	FTSJ3	58	57.003	Sarcophilus_harrisii
ENSCSAVG00000003607	-	98	40.915	ENSSFOG00015018053	ftsj3	56	57.468	Scleropages_formosus
ENSCSAVG00000003607	-	69	58.255	ENSSMAG00000002863	ftsj3	56	59.150	Scophthalmus_maximus
ENSCSAVG00000003607	-	70	58.735	ENSSDUG00000003385	ftsj3	56	60.458	Seriola_dumerili
ENSCSAVG00000003607	-	98	58.735	ENSSLDG00000017970	ftsj3	56	60.458	Seriola_lalandi_dorsalis
ENSCSAVG00000003607	-	86	56.928	ENSSPUG00000012959	FTSJ3	57	59.283	Sphenodon_punctatus
ENSCSAVG00000003607	-	89	59.337	ENSSPAG00000002390	ftsj3	58	61.111	Stegastes_partitus
ENSCSAVG00000003607	-	84	56.426	ENSSSCG00000017288	FTSJ3	58	57.003	Sus_scrofa
ENSCSAVG00000003607	-	99	40.403	ENSTRUG00000017550	ftsj3	60	59.150	Takifugu_rubripes
ENSCSAVG00000003607	-	83	50.794	ENSTNIG00000015549	ftsj3	58	59.150	Tetraodon_nigroviridis
ENSCSAVG00000003607	-	83	56.426	ENSTBEG00000010295	FTSJ3	57	56.678	Tupaia_belangeri
ENSCSAVG00000003607	-	68	56.740	ENSTTRG00000006973	FTSJ3	58	57.003	Tursiops_truncatus
ENSCSAVG00000003607	-	59	69.403	ENSUAMG00000007332	FTSJ3	71	57.516	Ursus_americanus
ENSCSAVG00000003607	-	84	57.367	ENSUMAG00000017450	FTSJ3	58	57.655	Ursus_maritimus
ENSCSAVG00000003607	-	84	57.367	ENSVVUG00000006106	FTSJ3	58	57.655	Vulpes_vulpes
ENSCSAVG00000003607	-	95	37.740	ENSXETG00000006939	ftsj3	56	53.873	Xenopus_tropicalis
ENSCSAVG00000003607	-	73	58.434	ENSXCOG00000002999	ftsj3	60	60.131	Xiphophorus_couchianus
ENSCSAVG00000003607	-	70	58.434	ENSXMAG00000018139	ftsj3	56	60.131	Xiphophorus_maculatus