EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003633 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7429 bases
Position: chrreftig_35:462700-470128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006082	Pox_MCEL	PF03291.16	6.2e-74	1	1
ENSCSAVP00000006081	Pox_MCEL	PF03291.16	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006158	-	1062	-	ENSCSAVP00000006081	181 (aa)	-	H2YL79
ENSCSAVT00000006159	-	834	-	ENSCSAVP00000006082	270 (aa)	-	H2YL80

Gene Model

Click here to download ENSCSAVG00000003633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003633	-	83	52.444	ENSG00000101654	RNMT	65	52.062	Homo_sapiens
ENSCSAVG00000003633	-	91	49.597	ENSAPOG00000015373	rnmt	66	49.597	Acanthochromis_polyacanthus
ENSCSAVG00000003633	-	91	50.403	ENSAOCG00000017046	rnmt	66	50.403	Amphiprion_ocellaris
ENSCSAVG00000003633	-	91	50.403	ENSAPEG00000003378	rnmt	66	50.403	Amphiprion_percula
ENSCSAVG00000003633	-	86	50.431	ENSATEG00000010242	rnmt	65	48.810	Anabas_testudineus
ENSCSAVG00000003633	-	85	51.515	ENSAPLG00000006690	RNMT	67	51.515	Anas_platyrhynchos
ENSCSAVG00000003633	-	91	51.984	ENSACLG00000006103	rnmt	69	51.984	Astatotilapia_calliptera
ENSCSAVG00000003633	-	99	45.018	ENSAMXG00000040785	rnmt	70	45.018	Astyanax_mexicanus
ENSCSAVG00000003633	-	89	44.939	ENSBTAG00000053069	-	56	44.939	Bos_taurus
ENSCSAVG00000003633	-	83	42.174	WBGene00006447	tag-72	60	42.174	Caenorhabditis_elegans
ENSCSAVG00000003633	-	92	46.032	ENSCAFG00000014973	-	83	51.266	Canis_familiaris
ENSCSAVG00000003633	-	83	51.327	ENSCAFG00020021706	-	63	54.023	Canis_lupus_dingo
ENSCSAVG00000003633	-	94	49.027	ENSTSYG00000008413	RNMT	54	49.027	Carlito_syrichta
ENSCSAVG00000003633	-	95	48.249	ENSCPOG00000034466	RNMT	54	48.249	Cavia_porcellus
ENSCSAVG00000003633	-	92	41.365	ENSCCAG00000027896	RNMT	56	51.908	Cebus_capucinus
ENSCSAVG00000003633	-	71	50.262	ENSCLAG00000000043	-	67	50.262	Chinchilla_lanigera
ENSCSAVG00000003633	-	71	50.262	ENSCLAG00000000563	-	67	50.262	Chinchilla_lanigera
ENSCSAVG00000003633	-	85	51.515	ENSCHOG00000005313	-	96	51.515	Choloepus_hoffmanni
ENSCSAVG00000003633	-	97	46.565	ENSCPBG00000028408	RNMT	63	46.565	Chrysemys_picta_bellii
ENSCSAVG00000003633	-	100	79.558	ENSCING00000000315	-	65	75.847	Ciona_intestinalis
ENSCSAVG00000003633	-	92	48.996	ENSCANG00000033574	RNMT	50	48.996	Colobus_angolensis_palliatus
ENSCSAVG00000003633	-	95	46.875	ENSCGRG00001024115	Rnmt	56	46.875	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003633	-	95	46.875	ENSCGRG00000002625	Rnmt	56	46.875	Cricetulus_griseus_crigri
ENSCSAVG00000003633	-	86	38.854	ENSCSEG00000018206	rnmt	59	53.448	Cynoglossus_semilaevis
ENSCSAVG00000003633	-	91	49.798	ENSCVAG00000011507	rnmt	64	49.798	Cyprinodon_variegatus
ENSCSAVG00000003633	-	89	49.587	ENSDARG00000070553	rnmt	60	49.587	Danio_rerio
ENSCSAVG00000003633	-	77	44.286	ENSDORG00000016722	Rnmt	67	46.500	Dipodomys_ordii
ENSCSAVG00000003633	-	92	41.935	ENSEBUG00000011600	rnmt	66	41.935	Eptatretus_burgeri
ENSCSAVG00000003633	-	95	48.473	ENSEASG00005001980	RNMT	54	48.473	Equus_asinus_asinus
ENSCSAVG00000003633	-	95	48.473	ENSECAG00000018523	RNMT	54	48.473	Equus_caballus
ENSCSAVG00000003633	-	96	33.977	ENSEEUG00000007657	RNMT	56	33.977	Erinaceus_europaeus
ENSCSAVG00000003633	-	93	50.794	ENSELUG00000000539	rnmt	64	50.794	Esox_lucius
ENSCSAVG00000003633	-	95	48.062	ENSFCAG00000018237	RNMT	54	48.062	Felis_catus
ENSCSAVG00000003633	-	92	50.201	ENSFALG00000006486	RNMT	60	50.201	Ficedula_albicollis
ENSCSAVG00000003633	-	98	46.468	ENSFDAG00000009165	RNMT	57	46.468	Fukomys_damarensis
ENSCSAVG00000003633	-	86	50.000	ENSFHEG00000008269	rnmt	66	47.843	Fundulus_heteroclitus
ENSCSAVG00000003633	-	84	48.458	ENSGMOG00000005329	rnmt	82	48.458	Gadus_morhua
ENSCSAVG00000003633	-	86	50.862	ENSGALG00000013889	RNMT	56	50.862	Gallus_gallus
ENSCSAVG00000003633	-	86	51.293	ENSGAFG00000014852	rnmt	66	50.739	Gambusia_affinis
ENSCSAVG00000003633	-	84	51.982	ENSGACG00000017603	rnmt	71	49.558	Gasterosteus_aculeatus
ENSCSAVG00000003633	-	97	46.565	ENSGAGG00000023821	RNMT	64	46.565	Gopherus_agassizii
ENSCSAVG00000003633	-	91	51.793	ENSHBUG00000013251	rnmt	66	51.793	Haplochromis_burtoni
ENSCSAVG00000003633	-	94	42.912	ENSHGLG00000000688	-	73	42.912	Heterocephalus_glaber_female
ENSCSAVG00000003633	-	98	46.840	ENSHGLG00000012521	-	57	46.840	Heterocephalus_glaber_female
ENSCSAVG00000003633	-	98	46.840	ENSHGLG00100010872	-	57	46.840	Heterocephalus_glaber_male
ENSCSAVG00000003633	-	94	42.529	ENSHGLG00100000497	-	73	42.529	Heterocephalus_glaber_male
ENSCSAVG00000003633	-	71	47.938	ENSHCOG00000014959	-	72	47.938	Hippocampus_comes
ENSCSAVG00000003633	-	96	48.679	ENSIPUG00000010491	rnmt	71	48.679	Ictalurus_punctatus
ENSCSAVG00000003633	-	99	46.816	ENSSTOG00000005341	RNMT	58	46.816	Ictidomys_tridecemlineatus
ENSCSAVG00000003633	-	74	47.264	ENSJJAG00000024212	Rnmt	72	47.264	Jaculus_jaculus
ENSCSAVG00000003633	-	93	49.805	ENSKMAG00000001934	rnmt	67	49.805	Kryptolebias_marmoratus
ENSCSAVG00000003633	-	91	49.600	ENSLBEG00000023699	RNMT	58	49.206	Labrus_bergylta
ENSCSAVG00000003633	-	91	49.600	ENSLBEG00000011737	rnmt	61	49.206	Labrus_bergylta
ENSCSAVG00000003633	-	84	50.220	ENSLACG00000014527	RNMT	65	50.220	Latimeria_chalumnae
ENSCSAVG00000003633	-	93	50.000	ENSLOCG00000009540	rnmt	61	50.000	Lepisosteus_oculatus
ENSCSAVG00000003633	-	93	48.638	ENSLAFG00000006349	RNMT	55	48.638	Loxodonta_africana
ENSCSAVG00000003633	-	92	48.996	ENSMFAG00000042388	RNMT	50	48.996	Macaca_fascicularis
ENSCSAVG00000003633	-	72	49.744	ENSMNEG00000039385	RNMT	65	49.744	Macaca_nemestrina
ENSCSAVG00000003633	-	93	48.810	ENSMAMG00000022178	rnmt	67	48.810	Mastacembelus_armatus
ENSCSAVG00000003633	-	91	51.793	ENSMZEG00005012046	rnmt	66	51.793	Maylandia_zebra
ENSCSAVG00000003633	-	86	50.862	ENSMGAG00000008595	RNMT	63	50.862	Meleagris_gallopavo
ENSCSAVG00000003633	-	87	49.362	ENSMAUG00000000955	Rnmt	51	49.362	Mesocricetus_auratus
ENSCSAVG00000003633	-	95	47.471	ENSMICG00000001422	RNMT	54	47.082	Microcebus_murinus
ENSCSAVG00000003633	-	99	45.693	ENSMOCG00000011156	Rnmt	59	45.693	Microtus_ochrogaster
ENSCSAVG00000003633	-	84	52.423	ENSMMOG00000017536	rnmt	66	51.695	Mola_mola
ENSCSAVG00000003633	-	97	43.511	ENSMODG00000021415	RNMT	55	43.511	Monodelphis_domestica
ENSCSAVG00000003633	-	88	45.378	ENSMALG00000011454	rnmt	57	45.378	Monopterus_albus
ENSCSAVG00000003633	-	87	48.936	MGP_CAROLIEiJ_G0022378	Rnmt	51	48.936	Mus_caroli
ENSCSAVG00000003633	-	99	44.610	ENSMUSG00000009535	Rnmt	58	44.610	Mus_musculus
ENSCSAVG00000003633	-	96	46.388	MGP_PahariEiJ_G0019107	Rnmt	57	46.388	Mus_pahari
ENSCSAVG00000003633	-	87	48.511	MGP_SPRETEiJ_G0023290	Rnmt	51	48.511	Mus_spretus
ENSCSAVG00000003633	-	95	48.062	ENSMPUG00000004312	RNMT	54	48.062	Mustela_putorius_furo
ENSCSAVG00000003633	-	95	48.638	ENSMLUG00000013513	RNMT	51	48.638	Myotis_lucifugus
ENSCSAVG00000003633	-	99	44.569	ENSNGAG00000014958	Rnmt	58	44.569	Nannospalax_galili
ENSCSAVG00000003633	-	91	50.996	ENSNBRG00000021102	rnmt	67	50.996	Neolamprologus_brichardi
ENSCSAVG00000003633	-	76	47.143	ENSMEUG00000005362	-	58	47.143	Notamacropus_eugenii
ENSCSAVG00000003633	-	93	45.635	ENSOPRG00000015458	RNMT	71	45.635	Ochotona_princeps
ENSCSAVG00000003633	-	95	47.860	ENSODEG00000000884	RNMT	55	47.860	Octodon_degus
ENSCSAVG00000003633	-	91	51.793	ENSONIG00000015321	rnmt	66	51.793	Oreochromis_niloticus
ENSCSAVG00000003633	-	97	45.627	ENSOANG00000008302	-	54	45.627	Ornithorhynchus_anatinus
ENSCSAVG00000003633	-	92	49.600	ENSORLG00000001708	rnmt	65	49.600	Oryzias_latipes
ENSCSAVG00000003633	-	92	49.402	ENSORLG00020010098	rnmt	65	49.402	Oryzias_latipes_hni
ENSCSAVG00000003633	-	92	49.600	ENSORLG00015000480	rnmt	65	49.600	Oryzias_latipes_hsok
ENSCSAVG00000003633	-	84	51.542	ENSOMEG00000009112	rnmt	65	49.004	Oryzias_melastigma
ENSCSAVG00000003633	-	99	46.442	ENSOGAG00000001325	RNMT	56	46.442	Otolemur_garnettii
ENSCSAVG00000003633	-	95	48.062	ENSPPRG00000009157	RNMT	54	48.062	Panthera_pardus
ENSCSAVG00000003633	-	95	48.062	ENSPTIG00000006070	RNMT	54	48.062	Panthera_tigris_altaica
ENSCSAVG00000003633	-	92	48.996	ENSPANG00000010248	RNMT	50	48.996	Papio_anubis
ENSCSAVG00000003633	-	84	50.220	ENSPKIG00000000087	rnmt	59	50.246	Paramormyrops_kingsleyae
ENSCSAVG00000003633	-	95	47.104	ENSPSIG00000007297	RNMT	62	47.104	Pelodiscus_sinensis
ENSCSAVG00000003633	-	93	48.031	ENSPMGG00000023990	rnmt	67	48.031	Periophthalmus_magnuspinnatus
ENSCSAVG00000003633	-	77	47.343	ENSPEMG00000022773	Rnmt	51	47.343	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003633	-	86	51.293	ENSPFOG00000003283	rnmt	64	49.603	Poecilia_formosa
ENSCSAVG00000003633	-	86	50.862	ENSPLAG00000002295	rnmt	64	49.206	Poecilia_latipinna
ENSCSAVG00000003633	-	86	51.293	ENSPMEG00000010901	rnmt	64	49.603	Poecilia_mexicana
ENSCSAVG00000003633	-	86	50.862	ENSPREG00000012978	rnmt	66	49.020	Poecilia_reticulata
ENSCSAVG00000003633	-	77	42.857	ENSPCOG00000021970	-	60	42.857	Propithecus_coquereli
ENSCSAVG00000003633	-	95	47.876	ENSPVAG00000006213	RNMT	54	47.876	Pteropus_vampyrus
ENSCSAVG00000003633	-	91	51.793	ENSPNYG00000010841	rnmt	66	51.793	Pundamilia_nyererei
ENSCSAVG00000003633	-	97	46.269	ENSPNAG00000025746	rnmt	71	46.269	Pygocentrus_nattereri
ENSCSAVG00000003633	-	99	45.387	ENSRNOG00000016698	Rnmt	59	45.387	Rattus_norvegicus
ENSCSAVG00000003633	-	90	33.205	YBR236C	-	57	33.205	Saccharomyces_cerevisiae
ENSCSAVG00000003633	-	97	46.241	ENSSHAG00000015457	RNMT	55	46.241	Sarcophilus_harrisii
ENSCSAVG00000003633	-	91	47.222	ENSSFOG00015019605	rnmt	66	47.222	Scleropages_formosus
ENSCSAVG00000003633	-	82	44.595	ENSSMAG00000014530	-	88	44.595	Scophthalmus_maximus
ENSCSAVG00000003633	-	51	47.552	ENSSMAG00000014552	-	55	47.552	Scophthalmus_maximus
ENSCSAVG00000003633	-	84	51.982	ENSSDUG00000021026	rnmt	64	48.413	Seriola_dumerili
ENSCSAVG00000003633	-	75	52.217	ENSSLDG00000001330	rnmt	70	52.217	Seriola_lalandi_dorsalis
ENSCSAVG00000003633	-	99	44.944	ENSSARG00000007255	RNMT	58	44.944	Sorex_araneus
ENSCSAVG00000003633	-	95	46.565	ENSSPUG00000012731	RNMT	62	46.565	Sphenodon_punctatus
ENSCSAVG00000003633	-	75	53.695	ENSSPAG00000010250	rnmt	73	52.113	Stegastes_partitus
ENSCSAVG00000003633	-	75	48.276	ENSTGUG00000013961	-	71	48.276	Taeniopygia_guttata
ENSCSAVG00000003633	-	85	51.515	ENSTGUG00000009450	-	72	51.515	Taeniopygia_guttata
ENSCSAVG00000003633	-	91	48.400	ENSTRUG00000000217	rnmt	66	52.217	Takifugu_rubripes
ENSCSAVG00000003633	-	89	49.590	ENSTNIG00000018158	rnmt	70	49.590	Tetraodon_nigroviridis
ENSCSAVG00000003633	-	95	47.287	ENSUAMG00000002542	RNMT	54	47.287	Ursus_americanus
ENSCSAVG00000003633	-	95	47.287	ENSUMAG00000024862	RNMT	54	47.287	Ursus_maritimus
ENSCSAVG00000003633	-	95	46.899	ENSVVUG00000014550	RNMT	56	46.899	Vulpes_vulpes
ENSCSAVG00000003633	-	99	46.992	ENSXETG00000014707	rnmt	67	46.992	Xenopus_tropicalis
ENSCSAVG00000003633	-	52	47.917	ENSXCOG00000010593	-	82	47.917	Xiphophorus_couchianus
ENSCSAVG00000003633	-	91	50.201	ENSXMAG00000021564	rnmt	66	50.201	Xiphophorus_maculatus