EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9784 bases
Position: chrreftig_118:266046-275829
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006133	IBN_N	PF03810.19	4.8e-16	1	1
ENSCSAVP00000006132	IBN_N	PF03810.19	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006211	-	2232	-	ENSCSAVP00000006133	548 (aa)	-	H2YLD1
ENSCSAVT00000006210	-	2981	-	ENSCSAVP00000006132	957 (aa)	-	H2YLD0

Gene Model

Click here to download ENSCSAVG00000003664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003664	-	99	34.483	ENSG00000086200	IPO11	99	34.943	Homo_sapiens
ENSCSAVG00000003664	-	99	33.800	ENSAPOG00000009256	ipo11	99	33.800	Acanthochromis_polyacanthus
ENSCSAVG00000003664	-	99	34.954	ENSAMEG00000004080	IPO11	98	34.954	Ailuropoda_melanoleuca
ENSCSAVG00000003664	-	89	34.963	ENSACIG00000003345	ipo11	96	34.963	Amphilophus_citrinellus
ENSCSAVG00000003664	-	99	33.501	ENSAOCG00000000164	ipo11	99	33.501	Amphiprion_ocellaris
ENSCSAVG00000003664	-	99	33.401	ENSAPEG00000005496	ipo11	99	33.401	Amphiprion_percula
ENSCSAVG00000003664	-	98	33.333	ENSATEG00000016853	ipo11	99	31.992	Anabas_testudineus
ENSCSAVG00000003664	-	99	32.700	ENSAPLG00000009338	IPO11	99	32.700	Anas_platyrhynchos
ENSCSAVG00000003664	-	99	34.010	ENSACAG00000008472	IPO11	98	34.010	Anolis_carolinensis
ENSCSAVG00000003664	-	99	34.545	ENSANAG00000027877	IPO11	99	34.545	Aotus_nancymaae
ENSCSAVG00000003664	-	99	32.368	ENSACLG00000014997	ipo11	99	32.368	Astatotilapia_calliptera
ENSCSAVG00000003664	-	99	34.309	ENSAMXG00000005993	ipo11	99	34.813	Astyanax_mexicanus
ENSCSAVG00000003664	-	98	33.394	ENSBTAG00000018616	IPO11	99	34.407	Bos_taurus
ENSCSAVG00000003664	-	99	34.646	ENSCJAG00000015559	IPO11	99	35.763	Callithrix_jacchus
ENSCSAVG00000003664	-	99	34.822	ENSCAFG00000007240	IPO11	99	34.822	Canis_familiaris
ENSCSAVG00000003664	-	94	34.156	ENSCAFG00020022776	-	97	37.607	Canis_lupus_dingo
ENSCSAVG00000003664	-	99	34.010	ENSCHIG00000013218	IPO11	99	34.522	Capra_hircus
ENSCSAVG00000003664	-	99	33.945	ENSCPOG00000009412	IPO11	99	33.945	Cavia_porcellus
ENSCSAVG00000003664	-	99	34.721	ENSCCAG00000024860	IPO11	99	34.721	Cebus_capucinus
ENSCSAVG00000003664	-	99	34.646	ENSCATG00000040159	IPO11	99	34.646	Cercocebus_atys
ENSCSAVG00000003664	-	99	34.619	ENSCLAG00000003889	IPO11	99	34.619	Chinchilla_lanigera
ENSCSAVG00000003664	-	98	33.942	ENSCSAG00000016001	IPO11	94	33.942	Chlorocebus_sabaeus
ENSCSAVG00000003664	-	75	41.667	ENSCHOG00000002780	IPO11	54	41.667	Choloepus_hoffmanni
ENSCSAVG00000003664	-	99	34.347	ENSCPBG00000026824	IPO11	99	34.347	Chrysemys_picta_bellii
ENSCSAVG00000003664	-	99	69.401	ENSCING00000006626	-	100	69.401	Ciona_intestinalis
ENSCSAVG00000003664	-	99	32.457	ENSCANG00000042405	IPO11	99	35.098	Colobus_angolensis_palliatus
ENSCSAVG00000003664	-	99	34.200	ENSCGRG00001012206	Ipo11	99	34.830	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003664	-	99	34.200	ENSCGRG00000003026	-	99	34.830	Cricetulus_griseus_crigri
ENSCSAVG00000003664	-	99	33.635	ENSCSEG00000017257	ipo11	99	33.635	Cynoglossus_semilaevis
ENSCSAVG00000003664	-	99	34.141	ENSCVAG00000011995	ipo11	99	34.141	Cyprinodon_variegatus
ENSCSAVG00000003664	-	99	34.397	ENSDARG00000054224	ipo11	99	34.397	Danio_rerio
ENSCSAVG00000003664	-	99	33.503	ENSDORG00000002721	Ipo11	99	33.603	Dipodomys_ordii
ENSCSAVG00000003664	-	99	31.928	ENSEBUG00000003347	ipo11	99	31.932	Eptatretus_burgeri
ENSCSAVG00000003664	-	94	33.781	ENSEASG00005006951	-	94	33.781	Equus_asinus_asinus
ENSCSAVG00000003664	-	99	34.822	ENSECAG00000014185	IPO11	97	34.822	Equus_caballus
ENSCSAVG00000003664	-	64	38.506	ENSEEUG00000000271	IPO11	63	38.506	Erinaceus_europaeus
ENSCSAVG00000003664	-	99	35.265	ENSELUG00000002842	ipo11	99	35.265	Esox_lucius
ENSCSAVG00000003664	-	99	34.822	ENSFCAG00000003236	IPO11	99	34.822	Felis_catus
ENSCSAVG00000003664	-	99	34.347	ENSFALG00000011086	IPO11	99	34.347	Ficedula_albicollis
ENSCSAVG00000003664	-	99	34.315	ENSFDAG00000016117	IPO11	99	34.315	Fukomys_damarensis
ENSCSAVG00000003664	-	98	31.017	ENSFHEG00000017985	ipo11	98	31.017	Fundulus_heteroclitus
ENSCSAVG00000003664	-	99	33.735	ENSGMOG00000007727	ipo11	99	33.735	Gadus_morhua
ENSCSAVG00000003664	-	99	34.144	ENSGALG00000014740	IPO11	99	34.144	Gallus_gallus
ENSCSAVG00000003664	-	99	34.038	ENSGAFG00000012342	ipo11	99	34.038	Gambusia_affinis
ENSCSAVG00000003664	-	99	33.903	ENSGACG00000006939	ipo11	99	33.903	Gasterosteus_aculeatus
ENSCSAVG00000003664	-	94	33.586	ENSGAGG00000008880	IPO11	95	39.157	Gopherus_agassizii
ENSCSAVG00000003664	-	99	34.646	ENSGGOG00000003240	IPO11	99	34.646	Gorilla_gorilla
ENSCSAVG00000003664	-	99	34.297	ENSHBUG00000004364	ipo11	99	34.297	Haplochromis_burtoni
ENSCSAVG00000003664	-	99	34.721	ENSHGLG00000002375	IPO11	99	34.721	Heterocephalus_glaber_female
ENSCSAVG00000003664	-	99	34.721	ENSHGLG00100011662	IPO11	99	34.721	Heterocephalus_glaber_male
ENSCSAVG00000003664	-	99	33.266	ENSHCOG00000013529	ipo11	99	33.266	Hippocampus_comes
ENSCSAVG00000003664	-	99	31.238	ENSIPUG00000019077	clc4f	99	31.673	Ictalurus_punctatus
ENSCSAVG00000003664	-	99	34.619	ENSSTOG00000006070	IPO11	99	34.619	Ictidomys_tridecemlineatus
ENSCSAVG00000003664	-	99	34.006	ENSJJAG00000007223	Ipo11	99	34.006	Jaculus_jaculus
ENSCSAVG00000003664	-	99	33.333	ENSKMAG00000013674	ipo11	99	33.740	Kryptolebias_marmoratus
ENSCSAVG00000003664	-	99	33.665	ENSLBEG00000003126	ipo11	99	33.665	Labrus_bergylta
ENSCSAVG00000003664	-	99	33.333	ENSLOCG00000007848	ipo11	99	33.333	Lepisosteus_oculatus
ENSCSAVG00000003664	-	98	35.234	ENSLAFG00000003115	IPO11	98	35.714	Loxodonta_africana
ENSCSAVG00000003664	-	99	34.646	ENSMFAG00000035631	IPO11	99	33.939	Macaca_fascicularis
ENSCSAVG00000003664	-	99	34.646	ENSMMUG00000001233	IPO11	99	34.646	Macaca_mulatta
ENSCSAVG00000003664	-	99	34.747	ENSMNEG00000032061	IPO11	99	34.040	Macaca_nemestrina
ENSCSAVG00000003664	-	99	34.646	ENSMLEG00000014468	IPO11	99	34.646	Mandrillus_leucophaeus
ENSCSAVG00000003664	-	99	34.095	ENSMAMG00000020889	ipo11	99	34.095	Mastacembelus_armatus
ENSCSAVG00000003664	-	99	34.232	ENSMZEG00005006586	ipo11	99	34.232	Maylandia_zebra
ENSCSAVG00000003664	-	99	31.814	ENSMGAG00000004204	IPO11	99	31.814	Meleagris_gallopavo
ENSCSAVG00000003664	-	99	31.579	ENSMAUG00000020293	Ipo11	99	31.996	Mesocricetus_auratus
ENSCSAVG00000003664	-	99	33.401	ENSMICG00000036842	-	99	33.401	Microcebus_murinus
ENSCSAVG00000003664	-	99	34.416	ENSMICG00000016463	-	99	34.416	Microcebus_murinus
ENSCSAVG00000003664	-	99	33.803	ENSMOCG00000000236	Ipo11	99	34.438	Microtus_ochrogaster
ENSCSAVG00000003664	-	99	32.800	ENSMMOG00000001391	ipo11	99	32.800	Mola_mola
ENSCSAVG00000003664	-	98	34.318	ENSMODG00000019612	IPO11	98	34.318	Monodelphis_domestica
ENSCSAVG00000003664	-	99	34.163	ENSMALG00000017198	ipo11	99	34.163	Monopterus_albus
ENSCSAVG00000003664	-	99	34.068	MGP_CAROLIEiJ_G0018871	Ipo11	99	34.700	Mus_caroli
ENSCSAVG00000003664	-	99	34.168	ENSMUSG00000042590	Ipo11	99	34.800	Mus_musculus
ENSCSAVG00000003664	-	99	34.000	MGP_PahariEiJ_G0015943	Ipo11	99	34.631	Mus_pahari
ENSCSAVG00000003664	-	99	34.168	MGP_SPRETEiJ_G0019750	Ipo11	99	34.800	Mus_spretus
ENSCSAVG00000003664	-	99	34.010	ENSMPUG00000007026	IPO11	99	34.010	Mustela_putorius_furo
ENSCSAVG00000003664	-	99	34.619	ENSMLUG00000011760	IPO11	98	34.619	Myotis_lucifugus
ENSCSAVG00000003664	-	99	34.008	ENSNGAG00000007024	Ipo11	99	33.909	Nannospalax_galili
ENSCSAVG00000003664	-	94	33.228	ENSNBRG00000013831	ipo11	99	33.228	Neolamprologus_brichardi
ENSCSAVG00000003664	-	99	34.646	ENSNLEG00000003072	IPO11	99	34.646	Nomascus_leucogenys
ENSCSAVG00000003664	-	99	34.619	ENSODEG00000017269	IPO11	99	34.619	Octodon_degus
ENSCSAVG00000003664	-	99	34.232	ENSONIG00000015147	ipo11	99	34.232	Oreochromis_niloticus
ENSCSAVG00000003664	-	90	33.598	ENSOANG00000012524	IPO11	90	34.982	Ornithorhynchus_anatinus
ENSCSAVG00000003664	-	99	34.203	ENSORLG00000004267	ipo11	99	34.203	Oryzias_latipes
ENSCSAVG00000003664	-	99	34.306	ENSORLG00020002280	ipo11	99	34.306	Oryzias_latipes_hni
ENSCSAVG00000003664	-	99	34.504	ENSORLG00015010565	ipo11	99	34.504	Oryzias_latipes_hsok
ENSCSAVG00000003664	-	99	34.434	ENSOMEG00000021765	ipo11	99	34.431	Oryzias_melastigma
ENSCSAVG00000003664	-	99	34.721	ENSOGAG00000000533	IPO11	98	34.721	Otolemur_garnettii
ENSCSAVG00000003664	-	99	34.010	ENSOARG00000006763	IPO11	98	34.010	Ovis_aries
ENSCSAVG00000003664	-	99	34.646	ENSPPAG00000042249	IPO11	99	34.646	Pan_paniscus
ENSCSAVG00000003664	-	99	34.822	ENSPPRG00000000856	IPO11	99	34.822	Panthera_pardus
ENSCSAVG00000003664	-	99	34.822	ENSPTIG00000015280	IPO11	99	34.822	Panthera_tigris_altaica
ENSCSAVG00000003664	-	99	34.646	ENSPTRG00000016915	IPO11	99	34.646	Pan_troglodytes
ENSCSAVG00000003664	-	99	34.646	ENSPANG00000013348	IPO11	99	34.646	Papio_anubis
ENSCSAVG00000003664	-	99	34.600	ENSPKIG00000016964	ipo11	99	34.600	Paramormyrops_kingsleyae
ENSCSAVG00000003664	-	99	34.514	ENSPSIG00000002959	IPO11	99	34.514	Pelodiscus_sinensis
ENSCSAVG00000003664	-	86	33.610	ENSPMGG00000013232	ipo11	90	34.463	Periophthalmus_magnuspinnatus
ENSCSAVG00000003664	-	99	34.000	ENSPEMG00000018393	Ipo11	99	34.631	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003664	-	98	34.518	ENSPCIG00000023292	IPO11	98	34.518	Phascolarctos_cinereus
ENSCSAVG00000003664	-	63	46.000	ENSPFOG00000019348	ipo11	94	32.482	Poecilia_formosa
ENSCSAVG00000003664	-	99	34.176	ENSPLAG00000023917	ipo11	99	34.176	Poecilia_latipinna
ENSCSAVG00000003664	-	99	34.234	ENSPMEG00000013269	ipo11	99	34.234	Poecilia_mexicana
ENSCSAVG00000003664	-	99	33.800	ENSPREG00000016551	ipo11	99	33.800	Poecilia_reticulata
ENSCSAVG00000003664	-	99	34.251	ENSPPYG00000015498	IPO11	99	34.251	Pongo_abelii
ENSCSAVG00000003664	-	99	30.903	ENSPCOG00000018118	IPO11	99	30.903	Propithecus_coquereli
ENSCSAVG00000003664	-	88	34.233	ENSPVAG00000005364	IPO11	87	34.233	Pteropus_vampyrus
ENSCSAVG00000003664	-	99	32.049	ENSPNYG00000015409	ipo11	99	32.049	Pundamilia_nyererei
ENSCSAVG00000003664	-	99	31.707	ENSPNAG00000022135	ipo11	99	31.814	Pygocentrus_nattereri
ENSCSAVG00000003664	-	99	33.166	ENSRNOG00000039717	Ipo11	99	33.568	Rattus_norvegicus
ENSCSAVG00000003664	-	99	33.466	ENSRBIG00000038296	IPO11	98	34.177	Rhinopithecus_bieti
ENSCSAVG00000003664	-	99	34.646	ENSRROG00000040336	IPO11	99	34.646	Rhinopithecus_roxellana
ENSCSAVG00000003664	-	99	34.545	ENSSBOG00000019916	IPO11	99	34.545	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003664	-	98	34.518	ENSSHAG00000005436	IPO11	98	34.518	Sarcophilus_harrisii
ENSCSAVG00000003664	-	99	34.476	ENSSFOG00015006427	ipo11	99	39.645	Scleropages_formosus
ENSCSAVG00000003664	-	99	33.566	ENSSMAG00000002409	ipo11	99	33.566	Scophthalmus_maximus
ENSCSAVG00000003664	-	99	33.964	ENSSDUG00000012263	ipo11	99	33.964	Seriola_dumerili
ENSCSAVG00000003664	-	99	33.964	ENSSLDG00000018490	ipo11	99	33.964	Seriola_lalandi_dorsalis
ENSCSAVG00000003664	-	79	56.000	ENSSARG00000003977	IPO11	81	36.408	Sorex_araneus
ENSCSAVG00000003664	-	95	31.439	ENSSPUG00000018027	IPO11	99	33.218	Sphenodon_punctatus
ENSCSAVG00000003664	-	99	32.887	ENSSPAG00000004399	ipo11	99	32.887	Stegastes_partitus
ENSCSAVG00000003664	-	99	34.721	ENSSSCG00000016938	IPO11	98	39.759	Sus_scrofa
ENSCSAVG00000003664	-	99	33.974	ENSTGUG00000002759	IPO11	99	33.974	Taeniopygia_guttata
ENSCSAVG00000003664	-	99	34.558	ENSTRUG00000014721	ipo11	99	34.297	Takifugu_rubripes
ENSCSAVG00000003664	-	95	30.410	ENSTNIG00000005025	ipo11	52	30.410	Tetraodon_nigroviridis
ENSCSAVG00000003664	-	77	41.803	ENSTTRG00000008770	IPO11	75	41.803	Tursiops_truncatus
ENSCSAVG00000003664	-	95	33.019	ENSUMAG00000008799	IPO11	97	36.568	Ursus_maritimus
ENSCSAVG00000003664	-	98	32.664	ENSVPAG00000008867	IPO11	95	34.710	Vicugna_pacos
ENSCSAVG00000003664	-	99	34.186	ENSVVUG00000005421	IPO11	99	34.186	Vulpes_vulpes
ENSCSAVG00000003664	-	99	34.040	ENSXETG00000014823	ipo11	99	34.006	Xenopus_tropicalis
ENSCSAVG00000003664	-	99	34.075	ENSXMAG00000015801	ipo11	99	34.075	Xiphophorus_maculatus