EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003684 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4535 bases
Position: chrreftig_1757:15-4549
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006175	ECR1_N	PF14382.6	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006253	-	848	-	ENSCSAVP00000006175	274 (aa)	-	H2YLH3

Gene Model

Click here to download ENSCSAVG00000003684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003684	-	100	61.957	ENSG00000130713	EXOSC2	99	61.086	Homo_sapiens
ENSCSAVG00000003684	-	91	66.667	ENSAPOG00000008861	exosc2	89	66.667	Acanthochromis_polyacanthus
ENSCSAVG00000003684	-	99	63.603	ENSAMEG00000016239	EXOSC2	91	63.603	Ailuropoda_melanoleuca
ENSCSAVG00000003684	-	92	69.048	ENSACIG00000019054	exosc2	84	69.048	Amphilophus_citrinellus
ENSCSAVG00000003684	-	100	64.855	ENSAOCG00000004983	exosc2	92	64.855	Amphiprion_ocellaris
ENSCSAVG00000003684	-	100	64.855	ENSAOCG00000008577	exosc2	92	64.855	Amphiprion_ocellaris
ENSCSAVG00000003684	-	100	64.855	ENSAPEG00000014088	exosc2	92	64.855	Amphiprion_percula
ENSCSAVG00000003684	-	99	66.300	ENSATEG00000018680	exosc2	91	66.300	Anabas_testudineus
ENSCSAVG00000003684	-	92	66.142	ENSAPLG00000012516	EXOSC2	86	66.142	Anas_platyrhynchos
ENSCSAVG00000003684	-	99	63.100	ENSACAG00000002706	EXOSC2	90	63.100	Anolis_carolinensis
ENSCSAVG00000003684	-	97	66.171	ENSACLG00000013613	exosc2	90	66.171	Astatotilapia_calliptera
ENSCSAVG00000003684	-	100	63.669	ENSAMXG00000042605	exosc2	93	63.669	Astyanax_mexicanus
ENSCSAVG00000003684	-	100	62.319	ENSBTAG00000048071	EXOSC2	92	62.319	Bos_taurus
ENSCSAVG00000003684	-	94	42.636	WBGene00022232	exos-2	84	43.023	Caenorhabditis_elegans
ENSCSAVG00000003684	-	100	61.957	ENSCJAG00000020537	EXOSC2	92	61.957	Callithrix_jacchus
ENSCSAVG00000003684	-	99	63.603	ENSCAFG00000019941	EXOSC2	91	63.603	Canis_familiaris
ENSCSAVG00000003684	-	99	63.603	ENSCAFG00020024047	EXOSC2	91	63.603	Canis_lupus_dingo
ENSCSAVG00000003684	-	100	62.681	ENSCHIG00000021398	EXOSC2	92	62.681	Capra_hircus
ENSCSAVG00000003684	-	100	62.681	ENSTSYG00000001805	EXOSC2	92	62.681	Carlito_syrichta
ENSCSAVG00000003684	-	100	60.650	ENSCPOG00000005902	EXOSC2	92	60.650	Cavia_porcellus
ENSCSAVG00000003684	-	100	61.957	ENSCCAG00000019749	EXOSC2	92	61.957	Cebus_capucinus
ENSCSAVG00000003684	-	100	62.319	ENSCATG00000025389	-	92	62.319	Cercocebus_atys
ENSCSAVG00000003684	-	100	62.681	ENSCLAG00000006195	EXOSC2	92	62.681	Chinchilla_lanigera
ENSCSAVG00000003684	-	100	62.319	ENSCSAG00000014760	EXOSC2	92	62.319	Chlorocebus_sabaeus
ENSCSAVG00000003684	-	99	62.500	ENSCHOG00000000858	EXOSC2	91	62.500	Choloepus_hoffmanni
ENSCSAVG00000003684	-	100	63.538	ENSCPBG00000022626	EXOSC2	92	63.538	Chrysemys_picta_bellii
ENSCSAVG00000003684	-	100	78.182	ENSCING00000014934	-	91	78.182	Ciona_intestinalis
ENSCSAVG00000003684	-	100	62.319	ENSCANG00000039828	-	92	62.319	Colobus_angolensis_palliatus
ENSCSAVG00000003684	-	93	58.594	ENSCANG00000029298	-	85	58.594	Colobus_angolensis_palliatus
ENSCSAVG00000003684	-	100	63.043	ENSCGRG00001013981	Exosc2	92	63.043	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003684	-	100	63.043	ENSCGRG00000017629	Exosc2	92	63.043	Cricetulus_griseus_crigri
ENSCSAVG00000003684	-	99	67.159	ENSCSEG00000016539	exosc2	91	67.159	Cynoglossus_semilaevis
ENSCSAVG00000003684	-	92	69.048	ENSCVAG00000022260	exosc2	84	69.048	Cyprinodon_variegatus
ENSCSAVG00000003684	-	100	61.871	ENSDARG00000028688	exosc2	93	61.871	Danio_rerio
ENSCSAVG00000003684	-	98	63.469	ENSDNOG00000025767	-	99	63.469	Dasypus_novemcinctus
ENSCSAVG00000003684	-	100	61.957	ENSDORG00000009238	Exosc2	92	61.957	Dipodomys_ordii
ENSCSAVG00000003684	-	89	59.756	FBgn0034879	Rrp4	82	59.514	Drosophila_melanogaster
ENSCSAVG00000003684	-	93	52.549	ENSETEG00000016130	-	90	52.549	Echinops_telfairi
ENSCSAVG00000003684	-	99	63.603	ENSEASG00005008475	EXOSC2	80	62.319	Equus_asinus_asinus
ENSCSAVG00000003684	-	99	63.603	ENSECAG00000007897	EXOSC2	80	62.319	Equus_caballus
ENSCSAVG00000003684	-	99	65.818	ENSELUG00000013641	exosc2	92	65.818	Esox_lucius
ENSCSAVG00000003684	-	100	61.957	ENSFCAG00000025936	EXOSC2	92	61.957	Felis_catus
ENSCSAVG00000003684	-	100	61.594	ENSFALG00000001446	EXOSC2	92	61.594	Ficedula_albicollis
ENSCSAVG00000003684	-	100	61.594	ENSFDAG00000017196	EXOSC2	92	61.594	Fukomys_damarensis
ENSCSAVG00000003684	-	100	64.493	ENSFHEG00000018571	exosc2	92	64.493	Fundulus_heteroclitus
ENSCSAVG00000003684	-	92	65.476	ENSGMOG00000011785	exosc2	84	65.476	Gadus_morhua
ENSCSAVG00000003684	-	100	62.681	ENSGALG00000040373	EXOSC2	92	62.681	Gallus_gallus
ENSCSAVG00000003684	-	100	63.768	ENSGAFG00000010283	exosc2	92	63.768	Gambusia_affinis
ENSCSAVG00000003684	-	99	63.736	ENSGACG00000016805	exosc2	98	70.659	Gasterosteus_aculeatus
ENSCSAVG00000003684	-	90	64.257	ENSGAGG00000021026	EXOSC2	92	64.257	Gopherus_agassizii
ENSCSAVG00000003684	-	100	61.594	ENSGGOG00000010578	EXOSC2	92	61.594	Gorilla_gorilla
ENSCSAVG00000003684	-	99	65.568	ENSHBUG00000022437	exosc2	91	65.568	Haplochromis_burtoni
ENSCSAVG00000003684	-	100	61.957	ENSHGLG00000012834	EXOSC2	92	61.957	Heterocephalus_glaber_female
ENSCSAVG00000003684	-	100	61.957	ENSHGLG00100007092	EXOSC2	92	61.957	Heterocephalus_glaber_male
ENSCSAVG00000003684	-	99	65.934	ENSHCOG00000019130	exosc2	91	65.934	Hippocampus_comes
ENSCSAVG00000003684	-	100	62.816	ENSIPUG00000015397	exosc2	93	62.816	Ictalurus_punctatus
ENSCSAVG00000003684	-	100	61.594	ENSSTOG00000005999	EXOSC2	92	61.594	Ictidomys_tridecemlineatus
ENSCSAVG00000003684	-	100	63.406	ENSJJAG00000003188	Exosc2	92	63.406	Jaculus_jaculus
ENSCSAVG00000003684	-	100	65.328	ENSKMAG00000017397	exosc2	92	65.328	Kryptolebias_marmoratus
ENSCSAVG00000003684	-	99	65.201	ENSLBEG00000019269	exosc2	91	65.201	Labrus_bergylta
ENSCSAVG00000003684	-	100	64.621	ENSLACG00000015530	EXOSC2	92	64.621	Latimeria_chalumnae
ENSCSAVG00000003684	-	100	62.094	ENSLAFG00000006984	EXOSC2	93	62.094	Loxodonta_africana
ENSCSAVG00000003684	-	100	62.319	ENSMFAG00000000597	-	92	62.319	Macaca_fascicularis
ENSCSAVG00000003684	-	93	54.297	ENSMFAG00000034160	-	71	54.297	Macaca_fascicularis
ENSCSAVG00000003684	-	100	60.507	ENSMMUG00000012498	EXOSC2	92	60.507	Macaca_mulatta
ENSCSAVG00000003684	-	99	63.603	ENSMNEG00000031861	-	92	62.319	Macaca_nemestrina
ENSCSAVG00000003684	-	93	54.688	ENSMNEG00000028704	-	77	54.688	Macaca_nemestrina
ENSCSAVG00000003684	-	100	62.319	ENSMLEG00000042587	-	92	62.319	Mandrillus_leucophaeus
ENSCSAVG00000003684	-	93	55.078	ENSMLEG00000029891	-	77	55.078	Mandrillus_leucophaeus
ENSCSAVG00000003684	-	99	65.568	ENSMAMG00000012466	exosc2	91	65.568	Mastacembelus_armatus
ENSCSAVG00000003684	-	97	65.799	ENSMZEG00005018737	exosc2	90	65.799	Maylandia_zebra
ENSCSAVG00000003684	-	100	62.681	ENSMGAG00000005450	EXOSC2	92	62.681	Meleagris_gallopavo
ENSCSAVG00000003684	-	100	63.043	ENSMAUG00000008299	Exosc2	92	63.043	Mesocricetus_auratus
ENSCSAVG00000003684	-	100	62.319	ENSMICG00000015495	EXOSC2	92	62.319	Microcebus_murinus
ENSCSAVG00000003684	-	100	63.043	ENSMOCG00000008262	Exosc2	92	63.043	Microtus_ochrogaster
ENSCSAVG00000003684	-	99	64.835	ENSMMOG00000009616	exosc2	91	64.835	Mola_mola
ENSCSAVG00000003684	-	100	62.094	ENSMODG00000012114	EXOSC2	92	62.094	Monodelphis_domestica
ENSCSAVG00000003684	-	99	65.934	ENSMALG00000022132	exosc2	91	65.934	Monopterus_albus
ENSCSAVG00000003684	-	100	63.406	MGP_CAROLIEiJ_G0023415	Exosc2	100	56.410	Mus_caroli
ENSCSAVG00000003684	-	100	63.406	ENSMUSG00000039356	Exosc2	100	56.410	Mus_musculus
ENSCSAVG00000003684	-	100	63.406	MGP_PahariEiJ_G0024872	Exosc2	100	56.410	Mus_pahari
ENSCSAVG00000003684	-	100	63.406	MGP_SPRETEiJ_G0024332	Exosc2	100	56.410	Mus_spretus
ENSCSAVG00000003684	-	99	63.603	ENSMPUG00000012686	EXOSC2	91	63.603	Mustela_putorius_furo
ENSCSAVG00000003684	-	100	62.230	ENSMLUG00000008776	EXOSC2	93	62.230	Myotis_lucifugus
ENSCSAVG00000003684	-	100	62.681	ENSNGAG00000019383	Exosc2	92	62.681	Nannospalax_galili
ENSCSAVG00000003684	-	99	64.835	ENSNBRG00000005453	exosc2	91	64.835	Neolamprologus_brichardi
ENSCSAVG00000003684	-	100	61.957	ENSNLEG00000012533	EXOSC2	92	61.957	Nomascus_leucogenys
ENSCSAVG00000003684	-	82	58.079	ENSMEUG00000000795	EXOSC2	76	58.079	Notamacropus_eugenii
ENSCSAVG00000003684	-	61	69.643	ENSOPRG00000008688	EXOSC2	56	69.643	Ochotona_princeps
ENSCSAVG00000003684	-	100	61.232	ENSODEG00000016880	-	92	61.232	Octodon_degus
ENSCSAVG00000003684	-	87	66.387	ENSODEG00000019513	-	92	66.387	Octodon_degus
ENSCSAVG00000003684	-	99	65.201	ENSONIG00000014086	exosc2	91	65.201	Oreochromis_niloticus
ENSCSAVG00000003684	-	100	62.681	ENSOANG00000001044	EXOSC2	92	62.681	Ornithorhynchus_anatinus
ENSCSAVG00000003684	-	100	63.406	ENSOCUG00000007138	EXOSC2	92	63.406	Oryctolagus_cuniculus
ENSCSAVG00000003684	-	100	64.130	ENSORLG00000007443	exosc2	92	64.130	Oryzias_latipes
ENSCSAVG00000003684	-	100	64.493	ENSORLG00020018902	exosc2	92	64.493	Oryzias_latipes_hni
ENSCSAVG00000003684	-	100	64.855	ENSORLG00015006767	exosc2	96	65.809	Oryzias_latipes_hsok
ENSCSAVG00000003684	-	100	64.130	ENSOMEG00000003533	exosc2	92	64.130	Oryzias_melastigma
ENSCSAVG00000003684	-	100	62.681	ENSOGAG00000007558	EXOSC2	92	62.681	Otolemur_garnettii
ENSCSAVG00000003684	-	100	61.871	ENSOARG00000007438	EXOSC2	93	61.871	Ovis_aries
ENSCSAVG00000003684	-	100	61.957	ENSPPAG00000034796	EXOSC2	92	61.957	Pan_paniscus
ENSCSAVG00000003684	-	100	61.957	ENSPPRG00000001089	EXOSC2	92	61.957	Panthera_pardus
ENSCSAVG00000003684	-	100	61.957	ENSPTIG00000021163	EXOSC2	92	61.957	Panthera_tigris_altaica
ENSCSAVG00000003684	-	100	61.957	ENSPTRG00000045766	-	92	61.957	Pan_troglodytes
ENSCSAVG00000003684	-	100	61.957	ENSPTRG00000021476	EXOSC2	92	61.957	Pan_troglodytes
ENSCSAVG00000003684	-	100	62.319	ENSPANG00000025966	EXOSC2	92	62.319	Papio_anubis
ENSCSAVG00000003684	-	97	65.543	ENSPKIG00000004271	exosc2	90	65.543	Paramormyrops_kingsleyae
ENSCSAVG00000003684	-	100	62.455	ENSPSIG00000006743	EXOSC2	92	62.455	Pelodiscus_sinensis
ENSCSAVG00000003684	-	87	67.647	ENSPMGG00000010980	exosc2	92	67.647	Periophthalmus_magnuspinnatus
ENSCSAVG00000003684	-	100	62.681	ENSPEMG00000006345	Exosc2	92	62.681	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003684	-	92	67.589	ENSPMAG00000001280	exosc2	84	67.589	Petromyzon_marinus
ENSCSAVG00000003684	-	100	62.094	ENSPCIG00000024122	EXOSC2	90	62.094	Phascolarctos_cinereus
ENSCSAVG00000003684	-	100	64.260	ENSPFOG00000019819	exosc2	93	64.260	Poecilia_formosa
ENSCSAVG00000003684	-	100	64.493	ENSPLAG00000004605	exosc2	92	64.493	Poecilia_latipinna
ENSCSAVG00000003684	-	100	64.493	ENSPMEG00000010976	exosc2	92	64.493	Poecilia_mexicana
ENSCSAVG00000003684	-	100	64.855	ENSPREG00000014306	exosc2	92	64.855	Poecilia_reticulata
ENSCSAVG00000003684	-	100	61.957	ENSPPYG00000019695	EXOSC2	92	61.957	Pongo_abelii
ENSCSAVG00000003684	-	100	61.232	ENSPCAG00000013400	EXOSC2	92	61.232	Procavia_capensis
ENSCSAVG00000003684	-	100	61.957	ENSPCOG00000017639	EXOSC2	92	61.957	Propithecus_coquereli
ENSCSAVG00000003684	-	100	60.870	ENSPVAG00000001513	EXOSC2	92	60.870	Pteropus_vampyrus
ENSCSAVG00000003684	-	99	65.568	ENSPNYG00000007383	exosc2	91	65.568	Pundamilia_nyererei
ENSCSAVG00000003684	-	100	63.538	ENSPNAG00000014281	exosc2	93	63.538	Pygocentrus_nattereri
ENSCSAVG00000003684	-	100	61.957	ENSRNOG00000009245	Exosc2	92	61.957	Rattus_norvegicus
ENSCSAVG00000003684	-	93	58.594	ENSRBIG00000029791	-	85	58.594	Rhinopithecus_bieti
ENSCSAVG00000003684	-	100	62.319	ENSRBIG00000031203	-	92	62.319	Rhinopithecus_bieti
ENSCSAVG00000003684	-	100	62.319	ENSRROG00000010827	-	92	62.319	Rhinopithecus_roxellana
ENSCSAVG00000003684	-	93	57.422	ENSRROG00000043609	-	85	57.422	Rhinopithecus_roxellana
ENSCSAVG00000003684	-	91	41.053	YHR069C	-	78	41.053	Saccharomyces_cerevisiae
ENSCSAVG00000003684	-	100	61.957	ENSSBOG00000022712	EXOSC2	92	61.957	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003684	-	100	61.733	ENSSHAG00000016050	EXOSC2	92	61.733	Sarcophilus_harrisii
ENSCSAVG00000003684	-	100	63.273	ENSSFOG00015011245	exosc2	92	63.273	Scleropages_formosus
ENSCSAVG00000003684	-	99	65.314	ENSSMAG00000003112	exosc2	91	65.314	Scophthalmus_maximus
ENSCSAVG00000003684	-	99	66.058	ENSSDUG00000004634	exosc2	91	66.058	Seriola_dumerili
ENSCSAVG00000003684	-	99	66.790	ENSSLDG00000010616	exosc2	91	66.790	Seriola_lalandi_dorsalis
ENSCSAVG00000003684	-	100	62.366	ENSSPUG00000013391	EXOSC2	92	62.366	Sphenodon_punctatus
ENSCSAVG00000003684	-	100	64.493	ENSSPAG00000022947	exosc2	92	64.493	Stegastes_partitus
ENSCSAVG00000003684	-	100	62.681	ENSSSCG00000005704	EXOSC2	92	62.681	Sus_scrofa
ENSCSAVG00000003684	-	100	61.957	ENSTGUG00000004697	EXOSC2	92	61.957	Taeniopygia_guttata
ENSCSAVG00000003684	-	92	65.873	ENSTRUG00000022436	exosc2	84	65.873	Takifugu_rubripes
ENSCSAVG00000003684	-	100	58.333	ENSTTRG00000015159	EXOSC2	92	58.333	Tursiops_truncatus
ENSCSAVG00000003684	-	99	63.971	ENSUAMG00000009651	EXOSC2	95	63.971	Ursus_americanus
ENSCSAVG00000003684	-	99	63.603	ENSUMAG00000018726	EXOSC2	91	63.603	Ursus_maritimus
ENSCSAVG00000003684	-	99	63.603	ENSVVUG00000027665	EXOSC2	91	63.603	Vulpes_vulpes
ENSCSAVG00000003684	-	100	65.217	ENSXETG00000001340	exosc2	92	65.217	Xenopus_tropicalis
ENSCSAVG00000003684	-	100	64.493	ENSXMAG00000005265	exosc2	93	64.599	Xiphophorus_maculatus