EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003751 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8589 bases
Position: chrreftig_262:120134-128722
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006270	PseudoU_synth_1	PF01416.20	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006349	-	1558	-	ENSCSAVP00000006270	479 (aa)	-	H2YLR8

Gene Model

Click here to download ENSCSAVG00000003751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003751	-	71	42.398	ENSG00000177192	PUS1	86	42.398	Homo_sapiens
ENSCSAVG00000003751	-	67	43.519	ENSAPOG00000007254	pus1	77	43.519	Acanthochromis_polyacanthus
ENSCSAVG00000003751	-	66	44.654	ENSAMEG00000013715	PUS1	78	44.654	Ailuropoda_melanoleuca
ENSCSAVG00000003751	-	74	40.669	ENSACIG00000009169	pus1	87	40.669	Amphilophus_citrinellus
ENSCSAVG00000003751	-	67	43.210	ENSAOCG00000022207	pus1	77	43.210	Amphiprion_ocellaris
ENSCSAVG00000003751	-	71	41.860	ENSAPEG00000006039	pus1	88	41.860	Amphiprion_percula
ENSCSAVG00000003751	-	74	41.944	ENSATEG00000020688	pus1	95	40.103	Anabas_testudineus
ENSCSAVG00000003751	-	66	45.000	ENSACAG00000007367	PUS1	85	45.000	Anolis_carolinensis
ENSCSAVG00000003751	-	62	42.857	ENSANAG00000036192	PUS1	92	42.857	Aotus_nancymaae
ENSCSAVG00000003751	-	78	40.106	ENSACLG00000020868	pus1	95	40.106	Astatotilapia_calliptera
ENSCSAVG00000003751	-	68	42.771	ENSAMXG00000008710	pus1	77	42.771	Astyanax_mexicanus
ENSCSAVG00000003751	-	66	44.514	ENSBTAG00000012990	PUS1	80	44.514	Bos_taurus
ENSCSAVG00000003751	-	67	37.574	WBGene00004248	pus-1	80	37.574	Caenorhabditis_elegans
ENSCSAVG00000003751	-	52	43.701	ENSCJAG00000003720	PUS1	69	43.701	Callithrix_jacchus
ENSCSAVG00000003751	-	71	42.151	ENSCAFG00000006429	PUS1	86	42.151	Canis_familiaris
ENSCSAVG00000003751	-	71	42.151	ENSCAFG00020010737	PUS1	80	42.151	Canis_lupus_dingo
ENSCSAVG00000003751	-	66	44.201	ENSCHIG00000000487	PUS1	80	44.201	Capra_hircus
ENSCSAVG00000003751	-	66	43.887	ENSTSYG00000032605	PUS1	87	43.478	Carlito_syrichta
ENSCSAVG00000003751	-	61	43.771	ENSCAPG00000006421	PUS1	93	43.189	Cavia_aperea
ENSCSAVG00000003751	-	66	44.654	ENSCPOG00000001027	PUS1	76	44.099	Cavia_porcellus
ENSCSAVG00000003751	-	66	44.828	ENSCCAG00000015879	PUS1	84	43.092	Cebus_capucinus
ENSCSAVG00000003751	-	66	43.887	ENSCATG00000032870	PUS1	83	42.434	Cercocebus_atys
ENSCSAVG00000003751	-	66	44.340	ENSCLAG00000011689	PUS1	75	44.340	Chinchilla_lanigera
ENSCSAVG00000003751	-	66	43.887	ENSCSAG00000001879	PUS1	75	43.887	Chlorocebus_sabaeus
ENSCSAVG00000003751	-	64	43.408	ENSCPBG00000024715	PUS1	88	43.408	Chrysemys_picta_bellii
ENSCSAVG00000003751	-	75	78.056	ENSCING00000009426	-	95	78.056	Ciona_intestinalis
ENSCSAVG00000003751	-	66	38.245	ENSCANG00000035561	PUS1	83	38.762	Colobus_angolensis_palliatus
ENSCSAVG00000003751	-	66	43.168	ENSCGRG00001019592	Pus1	76	43.168	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003751	-	66	43.168	ENSCGRG00000004048	Pus1	82	43.168	Cricetulus_griseus_crigri
ENSCSAVG00000003751	-	78	40.852	ENSCSEG00000003629	pus1	91	41.406	Cynoglossus_semilaevis
ENSCSAVG00000003751	-	66	45.141	ENSCVAG00000001265	pus1	77	45.141	Cyprinodon_variegatus
ENSCSAVG00000003751	-	79	39.130	ENSDARG00000045562	pus1	97	42.435	Danio_rerio
ENSCSAVG00000003751	-	71	42.614	ENSDNOG00000045576	PUS1	94	43.607	Dasypus_novemcinctus
ENSCSAVG00000003751	-	62	42.857	ENSDORG00000011455	Pus1	92	42.857	Dipodomys_ordii
ENSCSAVG00000003751	-	66	43.827	FBgn0038811	PUS1	78	43.827	Drosophila_melanogaster
ENSCSAVG00000003751	-	66	43.711	ENSETEG00000019160	PUS1	78	43.711	Echinops_telfairi
ENSCSAVG00000003751	-	68	36.723	ENSEBUG00000000368	-	65	36.723	Eptatretus_burgeri
ENSCSAVG00000003751	-	66	44.828	ENSEASG00005016535	PUS1	74	44.828	Equus_asinus_asinus
ENSCSAVG00000003751	-	66	44.410	ENSECAG00000006965	PUS1	81	44.410	Equus_caballus
ENSCSAVG00000003751	-	67	43.119	ENSELUG00000010424	pus1	83	43.119	Esox_lucius
ENSCSAVG00000003751	-	66	44.025	ENSFCAG00000010780	PUS1	75	44.025	Felis_catus
ENSCSAVG00000003751	-	71	43.768	ENSFALG00000008273	PUS1	80	43.768	Ficedula_albicollis
ENSCSAVG00000003751	-	66	43.789	ENSFDAG00000012518	PUS1	79	43.789	Fukomys_damarensis
ENSCSAVG00000003751	-	80	39.206	ENSFHEG00000010504	pus1	94	39.206	Fundulus_heteroclitus
ENSCSAVG00000003751	-	66	45.141	ENSGMOG00000008143	pus1	82	45.141	Gadus_morhua
ENSCSAVG00000003751	-	73	42.898	ENSGALG00000002354	PUS1	79	44.892	Gallus_gallus
ENSCSAVG00000003751	-	66	44.514	ENSGAFG00000006578	pus1	76	44.514	Gambusia_affinis
ENSCSAVG00000003751	-	78	40.360	ENSGACG00000017566	pus1	96	40.360	Gasterosteus_aculeatus
ENSCSAVG00000003751	-	72	40.517	ENSGAGG00000016730	-	91	42.767	Gopherus_agassizii
ENSCSAVG00000003751	-	66	44.201	ENSGGOG00000009178	PUS1	81	42.763	Gorilla_gorilla
ENSCSAVG00000003751	-	78	40.106	ENSHBUG00000001316	pus1	95	40.106	Haplochromis_burtoni
ENSCSAVG00000003751	-	66	43.865	ENSHGLG00000016086	PUS1	83	43.865	Heterocephalus_glaber_female
ENSCSAVG00000003751	-	66	43.558	ENSHGLG00100019362	PUS1	83	43.558	Heterocephalus_glaber_male
ENSCSAVG00000003751	-	72	42.330	ENSHCOG00000014288	pus1	79	42.330	Hippocampus_comes
ENSCSAVG00000003751	-	67	44.172	ENSIPUG00000010387	pus1	83	44.172	Ictalurus_punctatus
ENSCSAVG00000003751	-	66	44.720	ENSSTOG00000011245	PUS1	75	45.141	Ictidomys_tridecemlineatus
ENSCSAVG00000003751	-	66	44.201	ENSJJAG00000000088	Pus1	76	44.201	Jaculus_jaculus
ENSCSAVG00000003751	-	67	43.119	ENSKMAG00000012702	pus1	78	43.119	Kryptolebias_marmoratus
ENSCSAVG00000003751	-	78	39.895	ENSLBEG00000002845	pus1	91	39.895	Labrus_bergylta
ENSCSAVG00000003751	-	66	42.138	ENSLACG00000016044	-	96	42.138	Latimeria_chalumnae
ENSCSAVG00000003751	-	67	43.963	ENSLACG00000018598	PUS1	84	41.761	Latimeria_chalumnae
ENSCSAVG00000003751	-	75	42.700	ENSLOCG00000006127	pus1	92	42.700	Lepisosteus_oculatus
ENSCSAVG00000003751	-	66	43.385	ENSLAFG00000028731	PUS1	87	43.385	Loxodonta_africana
ENSCSAVG00000003751	-	66	43.887	ENSMFAG00000041194	PUS1	83	42.434	Macaca_fascicularis
ENSCSAVG00000003751	-	66	43.887	ENSMMUG00000031463	PUS1	87	42.434	Macaca_mulatta
ENSCSAVG00000003751	-	66	43.887	ENSMNEG00000002814	PUS1	83	42.434	Macaca_nemestrina
ENSCSAVG00000003751	-	63	42.434	ENSMLEG00000043560	PUS1	92	42.525	Mandrillus_leucophaeus
ENSCSAVG00000003751	-	73	42.297	ENSMAMG00000007371	pus1	85	42.297	Mastacembelus_armatus
ENSCSAVG00000003751	-	78	40.106	ENSMZEG00005017746	pus1	88	40.106	Maylandia_zebra
ENSCSAVG00000003751	-	69	42.090	ENSMGAG00000001958	PUS1	97	42.090	Meleagris_gallopavo
ENSCSAVG00000003751	-	66	43.711	ENSMAUG00000001482	Pus1	75	43.711	Mesocricetus_auratus
ENSCSAVG00000003751	-	66	44.514	ENSMICG00000030980	PUS1	79	44.514	Microcebus_murinus
ENSCSAVG00000003751	-	72	41.092	ENSMOCG00000022311	Pus1	85	36.207	Microtus_ochrogaster
ENSCSAVG00000003751	-	67	44.753	ENSMMOG00000021022	pus1	84	44.753	Mola_mola
ENSCSAVG00000003751	-	66	44.025	ENSMODG00000015551	PUS1	71	44.025	Monodelphis_domestica
ENSCSAVG00000003751	-	67	44.136	ENSMALG00000013202	pus1	78	44.136	Monopterus_albus
ENSCSAVG00000003751	-	66	43.478	MGP_CAROLIEiJ_G0027551	Pus1	82	43.478	Mus_caroli
ENSCSAVG00000003751	-	66	43.478	ENSMUSG00000029507	Pus1	82	43.478	Mus_musculus
ENSCSAVG00000003751	-	75	39.946	MGP_PahariEiJ_G0024133	Pus1	92	40.997	Mus_pahari
ENSCSAVG00000003751	-	66	43.478	MGP_SPRETEiJ_G0028549	Pus1	82	43.478	Mus_spretus
ENSCSAVG00000003751	-	66	44.340	ENSMPUG00000002314	PUS1	81	44.340	Mustela_putorius_furo
ENSCSAVG00000003751	-	66	42.547	ENSMLUG00000015790	PUS1	88	42.547	Myotis_lucifugus
ENSCSAVG00000003751	-	71	41.860	ENSNGAG00000012976	Pus1	82	39.011	Nannospalax_galili
ENSCSAVG00000003751	-	74	41.484	ENSNBRG00000020502	pus1	94	41.761	Neolamprologus_brichardi
ENSCSAVG00000003751	-	66	42.947	ENSNLEG00000008505	PUS1	92	42.662	Nomascus_leucogenys
ENSCSAVG00000003751	-	65	38.170	ENSMEUG00000002825	PUS1	86	38.170	Notamacropus_eugenii
ENSCSAVG00000003751	-	67	38.390	ENSOPRG00000002701	-	85	38.390	Ochotona_princeps
ENSCSAVG00000003751	-	66	43.887	ENSODEG00000008248	PUS1	85	43.478	Octodon_degus
ENSCSAVG00000003751	-	78	39.844	ENSONIG00000003803	pus1	95	39.844	Oreochromis_niloticus
ENSCSAVG00000003751	-	66	41.925	ENSOANG00000010619	PUS1	74	41.925	Ornithorhynchus_anatinus
ENSCSAVG00000003751	-	66	44.969	ENSOCUG00000007310	PUS1	70	44.410	Oryctolagus_cuniculus
ENSCSAVG00000003751	-	67	43.519	ENSORLG00000010787	pus1	78	43.519	Oryzias_latipes
ENSCSAVG00000003751	-	72	41.761	ENSORLG00020011483	pus1	84	41.761	Oryzias_latipes_hni
ENSCSAVG00000003751	-	67	43.210	ENSORLG00015023012	pus1	83	43.210	Oryzias_latipes_hsok
ENSCSAVG00000003751	-	67	44.753	ENSOMEG00000022655	pus1	76	44.753	Oryzias_melastigma
ENSCSAVG00000003751	-	66	44.514	ENSOGAG00000008720	PUS1	83	44.514	Otolemur_garnettii
ENSCSAVG00000003751	-	66	44.201	ENSOARG00000013316	PUS1	74	44.201	Ovis_aries
ENSCSAVG00000003751	-	66	44.514	ENSPPAG00000040971	PUS1	81	43.092	Pan_paniscus
ENSCSAVG00000003751	-	66	44.025	ENSPPRG00000015456	PUS1	81	44.025	Panthera_pardus
ENSCSAVG00000003751	-	66	44.025	ENSPTIG00000004201	PUS1	83	44.025	Panthera_tigris_altaica
ENSCSAVG00000003751	-	66	44.514	ENSPTRG00000005643	PUS1	81	43.092	Pan_troglodytes
ENSCSAVG00000003751	-	66	43.887	ENSPANG00000000376	PUS1	83	42.434	Papio_anubis
ENSCSAVG00000003751	-	68	43.807	ENSPKIG00000019369	pus1	75	43.807	Paramormyrops_kingsleyae
ENSCSAVG00000003751	-	67	44.479	ENSPSIG00000016432	PUS1	76	44.479	Pelodiscus_sinensis
ENSCSAVG00000003751	-	67	43.425	ENSPMGG00000004522	pus1	87	42.810	Periophthalmus_magnuspinnatus
ENSCSAVG00000003751	-	66	43.574	ENSPEMG00000013448	Pus1	76	43.574	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003751	-	66	42.320	ENSPMAG00000004636	pus1	97	42.320	Petromyzon_marinus
ENSCSAVG00000003751	-	52	42.857	ENSPCIG00000022609	-	61	42.857	Phascolarctos_cinereus
ENSCSAVG00000003751	-	66	44.514	ENSPFOG00000019669	pus1	76	44.514	Poecilia_formosa
ENSCSAVG00000003751	-	66	44.828	ENSPLAG00000002692	-	76	44.828	Poecilia_latipinna
ENSCSAVG00000003751	-	66	44.828	ENSPLAG00000007185	pus1	76	44.828	Poecilia_latipinna
ENSCSAVG00000003751	-	66	44.201	ENSPMEG00000006038	pus1	79	44.201	Poecilia_mexicana
ENSCSAVG00000003751	-	66	44.201	ENSPMEG00000011115	PUS1	77	44.201	Poecilia_mexicana
ENSCSAVG00000003751	-	66	43.887	ENSPREG00000007231	pus1	89	43.887	Poecilia_reticulata
ENSCSAVG00000003751	-	66	43.887	ENSPPYG00000005132	PUS1	75	43.887	Pongo_abelii
ENSCSAVG00000003751	-	52	44.444	ENSPCAG00000009110	-	61	44.444	Procavia_capensis
ENSCSAVG00000003751	-	66	40.312	ENSPCOG00000015595	PUS1	81	38.554	Propithecus_coquereli
ENSCSAVG00000003751	-	78	40.106	ENSPNYG00000013571	pus1	88	40.106	Pundamilia_nyererei
ENSCSAVG00000003751	-	67	43.865	ENSPNAG00000003938	pus1	77	43.865	Pygocentrus_nattereri
ENSCSAVG00000003751	-	66	43.478	ENSRNOG00000037500	Pus1	76	43.478	Rattus_norvegicus
ENSCSAVG00000003751	-	66	43.887	ENSRBIG00000043177	PUS1	85	42.434	Rhinopithecus_bieti
ENSCSAVG00000003751	-	66	44.514	ENSRROG00000039744	PUS1	87	41.751	Rhinopithecus_roxellana
ENSCSAVG00000003751	-	65	38.043	YPL212C	-	61	38.043	Saccharomyces_cerevisiae
ENSCSAVG00000003751	-	61	35.537	YGL063W	-	78	35.537	Saccharomyces_cerevisiae
ENSCSAVG00000003751	-	66	44.828	ENSSBOG00000023593	PUS1	87	43.046	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003751	-	66	42.857	ENSSHAG00000013193	PUS1	79	42.857	Sarcophilus_harrisii
ENSCSAVG00000003751	-	67	44.479	ENSSFOG00015003463	pus1	74	44.479	Scleropages_formosus
ENSCSAVG00000003751	-	67	44.923	ENSSMAG00000019075	pus1	84	42.655	Scophthalmus_maximus
ENSCSAVG00000003751	-	73	40.730	ENSSDUG00000007102	pus1	90	39.895	Seriola_dumerili
ENSCSAVG00000003751	-	73	41.011	ENSSLDG00000022850	pus1	84	41.011	Seriola_lalandi_dorsalis
ENSCSAVG00000003751	-	62	36.877	ENSSARG00000008367	PUS1	97	36.877	Sorex_araneus
ENSCSAVG00000003751	-	69	43.155	ENSSPUG00000010009	PUS1	83	43.155	Sphenodon_punctatus
ENSCSAVG00000003751	-	67	44.136	ENSSPAG00000006272	pus1	83	44.136	Stegastes_partitus
ENSCSAVG00000003751	-	66	43.887	ENSSSCG00000009741	PUS1	80	43.887	Sus_scrofa
ENSCSAVG00000003751	-	66	45.283	ENSTGUG00000008068	PUS1	96	45.283	Taeniopygia_guttata
ENSCSAVG00000003751	-	67	42.683	ENSTRUG00000002198	pus1	84	42.683	Takifugu_rubripes
ENSCSAVG00000003751	-	67	44.308	ENSTNIG00000003942	pus1	82	44.308	Tetraodon_nigroviridis
ENSCSAVG00000003751	-	66	44.828	ENSTTRG00000000632	PUS1	76	44.828	Tursiops_truncatus
ENSCSAVG00000003751	-	66	44.514	ENSUAMG00000017197	PUS1	81	44.514	Ursus_americanus
ENSCSAVG00000003751	-	66	44.099	ENSUMAG00000002831	PUS1	95	43.631	Ursus_maritimus
ENSCSAVG00000003751	-	66	44.654	ENSVVUG00000004199	PUS1	73	44.654	Vulpes_vulpes
ENSCSAVG00000003751	-	67	44.615	ENSXETG00000002030	pus1	81	44.615	Xenopus_tropicalis
ENSCSAVG00000003751	-	66	37.931	ENSXETG00000033640	-	99	37.931	Xenopus_tropicalis
ENSCSAVG00000003751	-	66	44.201	ENSXCOG00000004722	pus1	83	44.201	Xiphophorus_couchianus
ENSCSAVG00000003751	-	66	44.201	ENSXMAG00000000988	pus1	76	44.201	Xiphophorus_maculatus