EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003761 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5162 bases
Position: chrreftig_17:247181-252342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006282	Ribosomal_L28	PF00830.19	7.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006361	-	1056	-	ENSCSAVP00000006282	281 (aa)	-	H2YLT0

Gene Model

Click here to download ENSCSAVG00000003761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003761	-	94	42.642	ENSG00000086504	MRPL28	99	43.882	Homo_sapiens
ENSCSAVG00000003761	-	83	44.492	ENSAPOG00000016883	mrpl28	90	44.492	Acanthochromis_polyacanthus
ENSCSAVG00000003761	-	94	41.509	ENSAMEG00000007031	MRPL28	93	41.509	Ailuropoda_melanoleuca
ENSCSAVG00000003761	-	83	46.414	ENSACIG00000005641	mrpl28	90	46.414	Amphilophus_citrinellus
ENSCSAVG00000003761	-	83	44.304	ENSAOCG00000024148	mrpl28	90	45.540	Amphiprion_ocellaris
ENSCSAVG00000003761	-	83	44.492	ENSAPEG00000010705	mrpl28	90	44.492	Amphiprion_percula
ENSCSAVG00000003761	-	83	43.590	ENSATEG00000013085	mrpl28	89	43.590	Anabas_testudineus
ENSCSAVG00000003761	-	65	48.649	ENSACAG00000015301	MRPL28	69	48.649	Anolis_carolinensis
ENSCSAVG00000003761	-	81	46.725	ENSANAG00000022423	MRPL28	86	46.725	Aotus_nancymaae
ENSCSAVG00000003761	-	83	43.460	ENSACLG00000017376	mrpl28	90	43.460	Astatotilapia_calliptera
ENSCSAVG00000003761	-	82	43.348	ENSAMXG00000001999	mrpl28	88	43.348	Astyanax_mexicanus
ENSCSAVG00000003761	-	94	43.019	ENSBTAG00000016581	MRPL28	87	43.019	Bos_taurus
ENSCSAVG00000003761	-	92	40.769	ENSCAFG00000019682	MRPL28	91	41.445	Canis_familiaris
ENSCSAVG00000003761	-	92	41.923	ENSCAFG00020009225	MRPL28	91	41.923	Canis_lupus_dingo
ENSCSAVG00000003761	-	94	41.887	ENSCHIG00000016968	MRPL28	93	41.887	Capra_hircus
ENSCSAVG00000003761	-	69	49.231	ENSTSYG00000032509	MRPL28	79	49.231	Carlito_syrichta
ENSCSAVG00000003761	-	52	53.741	ENSCAPG00000011681	MRPL28	88	53.741	Cavia_aperea
ENSCSAVG00000003761	-	94	43.609	ENSCPOG00000007176	MRPL28	93	43.609	Cavia_porcellus
ENSCSAVG00000003761	-	94	42.264	ENSCCAG00000030887	MRPL28	93	42.264	Cebus_capucinus
ENSCSAVG00000003761	-	98	42.349	ENSCATG00000040016	MRPL28	100	42.349	Cercocebus_atys
ENSCSAVG00000003761	-	81	46.725	ENSCLAG00000014858	MRPL28	86	46.725	Chinchilla_lanigera
ENSCSAVG00000003761	-	94	43.396	ENSCSAG00000012838	MRPL28	93	43.396	Chlorocebus_sabaeus
ENSCSAVG00000003761	-	66	50.267	ENSCPBG00000026390	MRPL28	73	50.267	Chrysemys_picta_bellii
ENSCSAVG00000003761	-	95	66.541	ENSCING00000023726	-	94	66.541	Ciona_intestinalis
ENSCSAVG00000003761	-	94	43.609	ENSCANG00000033941	MRPL28	93	43.609	Colobus_angolensis_palliatus
ENSCSAVG00000003761	-	94	43.396	ENSCGRG00001012825	Mrpl28	93	43.396	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003761	-	94	43.396	ENSCGRG00000014549	Mrpl28	93	43.396	Cricetulus_griseus_crigri
ENSCSAVG00000003761	-	83	43.515	ENSCSEG00000008095	mrpl28	90	43.515	Cynoglossus_semilaevis
ENSCSAVG00000003761	-	83	43.644	ENSCVAG00000005123	mrpl28	90	43.644	Cyprinodon_variegatus
ENSCSAVG00000003761	-	84	43.038	ENSDARG00000057805	mrpl28	90	43.038	Danio_rerio
ENSCSAVG00000003761	-	52	51.020	ENSDORG00000024147	Mrpl28	89	51.020	Dipodomys_ordii
ENSCSAVG00000003761	-	80	46.491	ENSEBUG00000004106	mrpl28	87	46.491	Eptatretus_burgeri
ENSCSAVG00000003761	-	92	42.308	ENSEASG00005018175	MRPL28	91	42.308	Equus_asinus_asinus
ENSCSAVG00000003761	-	92	41.923	ENSECAG00000022663	MRPL28	91	41.923	Equus_caballus
ENSCSAVG00000003761	-	92	42.308	ENSEEUG00000006626	MRPL28	84	42.308	Erinaceus_europaeus
ENSCSAVG00000003761	-	85	44.628	ENSELUG00000014104	mrpl28	92	44.628	Esox_lucius
ENSCSAVG00000003761	-	94	42.642	ENSFCAG00000041050	MRPL28	93	42.642	Felis_catus
ENSCSAVG00000003761	-	57	47.205	ENSFALG00000004103	MRPL28	99	47.205	Ficedula_albicollis
ENSCSAVG00000003761	-	79	47.137	ENSFDAG00000011002	MRPL28	84	47.137	Fukomys_damarensis
ENSCSAVG00000003761	-	83	42.194	ENSFHEG00000006545	mrpl28	90	42.194	Fundulus_heteroclitus
ENSCSAVG00000003761	-	83	43.697	ENSGMOG00000010597	mrpl28	88	43.697	Gadus_morhua
ENSCSAVG00000003761	-	70	47.500	ENSGALG00000007473	MRPL28	78	47.500	Gallus_gallus
ENSCSAVG00000003761	-	83	44.915	ENSGAFG00000012123	mrpl28	90	44.915	Gambusia_affinis
ENSCSAVG00000003761	-	83	43.644	ENSGACG00000009641	mrpl28	95	41.045	Gasterosteus_aculeatus
ENSCSAVG00000003761	-	82	43.777	ENSGAGG00000023391	MRPL28	88	43.777	Gopherus_agassizii
ENSCSAVG00000003761	-	94	43.019	ENSGGOG00000006668	MRPL28	93	43.019	Gorilla_gorilla
ENSCSAVG00000003761	-	75	45.540	ENSHBUG00000002357	mrpl28	88	45.540	Haplochromis_burtoni
ENSCSAVG00000003761	-	94	43.284	ENSHGLG00000003807	MRPL28	93	43.284	Heterocephalus_glaber_female
ENSCSAVG00000003761	-	94	43.284	ENSHGLG00100012704	MRPL28	93	43.284	Heterocephalus_glaber_male
ENSCSAVG00000003761	-	83	44.915	ENSHCOG00000000219	mrpl28	90	44.915	Hippocampus_comes
ENSCSAVG00000003761	-	69	47.449	ENSIPUG00000015984	mrpl28	76	47.449	Ictalurus_punctatus
ENSCSAVG00000003761	-	94	42.642	ENSSTOG00000012316	MRPL28	92	42.642	Ictidomys_tridecemlineatus
ENSCSAVG00000003761	-	83	44.939	ENSJJAG00000008947	Mrpl28	93	44.939	Jaculus_jaculus
ENSCSAVG00000003761	-	83	46.639	ENSKMAG00000021277	mrpl28	90	46.639	Kryptolebias_marmoratus
ENSCSAVG00000003761	-	83	42.259	ENSLBEG00000020499	mrpl28	90	42.083	Labrus_bergylta
ENSCSAVG00000003761	-	96	35.211	ENSLACG00000009989	MRPL28	97	34.859	Latimeria_chalumnae
ENSCSAVG00000003761	-	83	42.623	ENSLOCG00000014850	mrpl28	90	42.623	Lepisosteus_oculatus
ENSCSAVG00000003761	-	94	41.418	ENSLAFG00000010776	MRPL28	94	41.418	Loxodonta_africana
ENSCSAVG00000003761	-	94	43.774	ENSMFAG00000006698	MRPL28	93	43.774	Macaca_fascicularis
ENSCSAVG00000003761	-	94	43.774	ENSMMUG00000000609	MRPL28	93	43.774	Macaca_mulatta
ENSCSAVG00000003761	-	94	43.774	ENSMNEG00000027279	MRPL28	93	43.774	Macaca_nemestrina
ENSCSAVG00000003761	-	94	43.774	ENSMLEG00000002439	MRPL28	93	43.774	Mandrillus_leucophaeus
ENSCSAVG00000003761	-	84	45.570	ENSMAMG00000011487	mrpl28	90	45.570	Mastacembelus_armatus
ENSCSAVG00000003761	-	83	43.460	ENSMZEG00005016524	mrpl28	90	43.460	Maylandia_zebra
ENSCSAVG00000003761	-	94	42.642	ENSMAUG00000003487	Mrpl28	93	42.642	Mesocricetus_auratus
ENSCSAVG00000003761	-	90	42.969	ENSMICG00000031344	MRPL28	93	41.887	Microcebus_murinus
ENSCSAVG00000003761	-	94	44.151	ENSMOCG00000014836	Mrpl28	93	44.151	Microtus_ochrogaster
ENSCSAVG00000003761	-	83	45.726	ENSMMOG00000012412	mrpl28	89	45.726	Mola_mola
ENSCSAVG00000003761	-	81	43.043	ENSMODG00000016666	MRPL28	87	43.043	Monodelphis_domestica
ENSCSAVG00000003761	-	83	47.458	ENSMALG00000011904	mrpl28	90	47.458	Monopterus_albus
ENSCSAVG00000003761	-	94	43.396	MGP_CAROLIEiJ_G0021273	Mrpl28	93	43.396	Mus_caroli
ENSCSAVG00000003761	-	94	43.396	ENSMUSG00000024181	Mrpl28	93	43.396	Mus_musculus
ENSCSAVG00000003761	-	81	47.162	MGP_PahariEiJ_G0023591	Mrpl28	86	47.162	Mus_pahari
ENSCSAVG00000003761	-	94	43.396	MGP_SPRETEiJ_G0022184	Mrpl28	93	43.396	Mus_spretus
ENSCSAVG00000003761	-	94	42.642	ENSMPUG00000016020	MRPL28	93	42.642	Mustela_putorius_furo
ENSCSAVG00000003761	-	94	42.642	ENSMLUG00000010009	MRPL28	93	42.642	Myotis_lucifugus
ENSCSAVG00000003761	-	88	42.400	ENSNGAG00000016312	Mrpl28	98	42.400	Nannospalax_galili
ENSCSAVG00000003761	-	83	43.882	ENSNBRG00000005544	mrpl28	90	43.882	Neolamprologus_brichardi
ENSCSAVG00000003761	-	94	42.264	ENSNLEG00000031011	MRPL28	93	42.264	Nomascus_leucogenys
ENSCSAVG00000003761	-	81	43.668	ENSMEUG00000000407	MRPL28	86	43.668	Notamacropus_eugenii
ENSCSAVG00000003761	-	81	46.288	ENSODEG00000015538	MRPL28	86	46.288	Octodon_degus
ENSCSAVG00000003761	-	83	44.726	ENSONIG00000005965	mrpl28	90	44.726	Oreochromis_niloticus
ENSCSAVG00000003761	-	83	44.915	ENSORLG00000006806	mrpl28	90	44.915	Oryzias_latipes
ENSCSAVG00000003761	-	83	44.915	ENSORLG00020002937	mrpl28	90	44.915	Oryzias_latipes_hni
ENSCSAVG00000003761	-	83	45.148	ENSORLG00015005123	mrpl28	90	45.148	Oryzias_latipes_hsok
ENSCSAVG00000003761	-	83	43.644	ENSOMEG00000013553	mrpl28	90	43.644	Oryzias_melastigma
ENSCSAVG00000003761	-	91	43.629	ENSOGAG00000014941	MRPL28	94	43.019	Otolemur_garnettii
ENSCSAVG00000003761	-	94	42.264	ENSOARG00000011786	MRPL28	93	42.264	Ovis_aries
ENSCSAVG00000003761	-	91	43.243	ENSPPAG00000034473	MRPL28	93	42.642	Pan_paniscus
ENSCSAVG00000003761	-	94	43.019	ENSPPRG00000002937	MRPL28	93	43.019	Panthera_pardus
ENSCSAVG00000003761	-	94	43.019	ENSPTIG00000017626	MRPL28	93	43.019	Panthera_tigris_altaica
ENSCSAVG00000003761	-	91	43.629	ENSPTRG00000047553	MRPL28	93	43.019	Pan_troglodytes
ENSCSAVG00000003761	-	94	43.774	ENSPANG00000018773	MRPL28	93	43.774	Papio_anubis
ENSCSAVG00000003761	-	78	46.875	ENSPKIG00000010370	mrpl28	84	46.875	Paramormyrops_kingsleyae
ENSCSAVG00000003761	-	93	41.887	ENSPSIG00000011177	MRPL28	97	41.887	Pelodiscus_sinensis
ENSCSAVG00000003761	-	88	45.238	ENSPMGG00000014190	mrpl28	95	45.238	Periophthalmus_magnuspinnatus
ENSCSAVG00000003761	-	94	43.019	ENSPEMG00000019054	Mrpl28	93	43.019	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003761	-	80	45.455	ENSPMAG00000004202	mrpl28	86	45.455	Petromyzon_marinus
ENSCSAVG00000003761	-	94	40.299	ENSPCIG00000000377	MRPL28	85	40.299	Phascolarctos_cinereus
ENSCSAVG00000003761	-	83	44.068	ENSPFOG00000009485	mrpl28	90	44.068	Poecilia_formosa
ENSCSAVG00000003761	-	83	44.068	ENSPLAG00000020059	mrpl28	90	44.068	Poecilia_latipinna
ENSCSAVG00000003761	-	83	43.644	ENSPMEG00000012919	mrpl28	90	43.644	Poecilia_mexicana
ENSCSAVG00000003761	-	83	43.220	ENSPREG00000022968	mrpl28	90	43.220	Poecilia_reticulata
ENSCSAVG00000003761	-	86	44.033	ENSPPYG00000006906	MRPL28	100	44.033	Pongo_abelii
ENSCSAVG00000003761	-	91	42.857	ENSPCAG00000011480	MRPL28	93	42.264	Procavia_capensis
ENSCSAVG00000003761	-	91	43.191	ENSPCOG00000021895	MRPL28	93	42.264	Propithecus_coquereli
ENSCSAVG00000003761	-	94	38.868	ENSPVAG00000000551	MRPL28	93	38.491	Pteropus_vampyrus
ENSCSAVG00000003761	-	75	45.070	ENSPNYG00000005347	mrpl28	88	45.070	Pundamilia_nyererei
ENSCSAVG00000003761	-	69	46.939	ENSPNAG00000009296	mrpl28	76	46.939	Pygocentrus_nattereri
ENSCSAVG00000003761	-	81	46.725	ENSRNOG00000042720	Mrpl28	86	46.725	Rattus_norvegicus
ENSCSAVG00000003761	-	94	44.151	ENSRBIG00000029953	MRPL28	93	44.151	Rhinopithecus_bieti
ENSCSAVG00000003761	-	94	44.151	ENSRROG00000042756	MRPL28	93	44.151	Rhinopithecus_roxellana
ENSCSAVG00000003761	-	81	47.826	ENSSBOG00000019789	MRPL28	87	47.826	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003761	-	82	43.590	ENSSHAG00000007606	MRPL28	89	43.590	Sarcophilus_harrisii
ENSCSAVG00000003761	-	77	45.413	ENSSFOG00015006866	mrpl28	83	45.413	Scleropages_formosus
ENSCSAVG00000003761	-	83	44.068	ENSSMAG00000013912	mrpl28	90	44.068	Scophthalmus_maximus
ENSCSAVG00000003761	-	83	43.644	ENSSDUG00000005764	mrpl28	90	43.644	Seriola_dumerili
ENSCSAVG00000003761	-	83	43.220	ENSSLDG00000000409	mrpl28	90	43.220	Seriola_lalandi_dorsalis
ENSCSAVG00000003761	-	81	44.541	ENSSPUG00000015322	MRPL28	88	44.541	Sphenodon_punctatus
ENSCSAVG00000003761	-	83	42.797	ENSSPAG00000011153	mrpl28	90	42.797	Stegastes_partitus
ENSCSAVG00000003761	-	91	41.313	ENSSSCG00000007984	MRPL28	91	41.538	Sus_scrofa
ENSCSAVG00000003761	-	83	44.915	ENSTRUG00000019877	mrpl28	90	44.915	Takifugu_rubripes
ENSCSAVG00000003761	-	83	44.068	ENSTNIG00000007746	mrpl28	90	44.068	Tetraodon_nigroviridis
ENSCSAVG00000003761	-	68	48.187	ENSTNIG00000002347	-	79	48.187	Tetraodon_nigroviridis
ENSCSAVG00000003761	-	94	42.642	ENSUAMG00000015724	MRPL28	89	42.642	Ursus_americanus
ENSCSAVG00000003761	-	94	42.642	ENSUMAG00000021029	MRPL28	93	42.642	Ursus_maritimus
ENSCSAVG00000003761	-	51	47.799	ENSVVUG00000013414	MRPL28	56	47.799	Vulpes_vulpes
ENSCSAVG00000003761	-	80	47.391	ENSXETG00000011564	mrpl28	86	47.391	Xenopus_tropicalis
ENSCSAVG00000003761	-	83	44.068	ENSXCOG00000012655	mrpl28	90	44.068	Xiphophorus_couchianus
ENSCSAVG00000003761	-	83	43.644	ENSXMAG00000004293	mrpl28	90	43.644	Xiphophorus_maculatus