EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003803 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 21115 bases
Position: chrreftig_133:45862-66976
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006357	Beta-Casp	PF10996.8	5.1e-08	1	1
ENSCSAVP00000006356	Beta-Casp	PF10996.8	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006437	-	1952	-	ENSCSAVP00000006357	635 (aa)	-	H2YM05
ENSCSAVT00000006436	-	2108	-	ENSCSAVP00000006356	653 (aa)	-	H2YM04
ENSCSAVT00000006438	-	894	-	ENSCSAVP00000006358	251 (aa)	-	H2YM06

Gene Model

Click here to download ENSCSAVG00000003803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003803	-	99	49.924	ENSG00000104299	INTS9	100	60.674	Homo_sapiens
ENSCSAVG00000003803	-	99	49.315	ENSAPOG00000023931	ints9	99	49.315	Acanthochromis_polyacanthus
ENSCSAVG00000003803	-	99	49.924	ENSAMEG00000015995	INTS9	99	49.924	Ailuropoda_melanoleuca
ENSCSAVG00000003803	-	99	48.585	ENSACIG00000012679	ints9	99	48.585	Amphilophus_citrinellus
ENSCSAVG00000003803	-	99	49.163	ENSAOCG00000013267	ints9	99	49.163	Amphiprion_ocellaris
ENSCSAVG00000003803	-	99	49.163	ENSAPEG00000015363	ints9	99	49.163	Amphiprion_percula
ENSCSAVG00000003803	-	99	48.706	ENSATEG00000016623	ints9	99	48.706	Anabas_testudineus
ENSCSAVG00000003803	-	99	50.228	ENSAPLG00000006167	INTS9	99	50.912	Anas_platyrhynchos
ENSCSAVG00000003803	-	99	48.858	ENSACAG00000010181	INTS9	99	49.240	Anolis_carolinensis
ENSCSAVG00000003803	-	99	47.032	ENSANAG00000031763	INTS9	99	47.032	Aotus_nancymaae
ENSCSAVG00000003803	-	99	48.585	ENSACLG00000007637	ints9	99	48.585	Astatotilapia_calliptera
ENSCSAVG00000003803	-	99	49.619	ENSAMXG00000018614	ints9	99	49.750	Astyanax_mexicanus
ENSCSAVG00000003803	-	99	50.076	ENSBTAG00000008845	INTS9	99	50.076	Bos_taurus
ENSCSAVG00000003803	-	99	49.057	ENSCJAG00000015614	INTS9	99	49.057	Callithrix_jacchus
ENSCSAVG00000003803	-	99	49.924	ENSCAFG00000008263	INTS9	99	49.924	Canis_familiaris
ENSCSAVG00000003803	-	99	49.924	ENSCAFG00020012346	INTS9	99	49.924	Canis_lupus_dingo
ENSCSAVG00000003803	-	99	50.076	ENSCHIG00000012847	INTS9	99	50.076	Capra_hircus
ENSCSAVG00000003803	-	99	49.619	ENSTSYG00000011662	INTS9	99	49.619	Carlito_syrichta
ENSCSAVG00000003803	-	93	46.785	ENSCAPG00000012568	INTS9	96	46.785	Cavia_aperea
ENSCSAVG00000003803	-	99	50.381	ENSCPOG00000013825	INTS9	99	50.381	Cavia_porcellus
ENSCSAVG00000003803	-	99	49.924	ENSCCAG00000005937	INTS9	99	49.924	Cebus_capucinus
ENSCSAVG00000003803	-	98	49.068	ENSCATG00000042463	INTS9	99	49.228	Cercocebus_atys
ENSCSAVG00000003803	-	99	49.924	ENSCLAG00000015789	INTS9	99	49.924	Chinchilla_lanigera
ENSCSAVG00000003803	-	99	49.772	ENSCSAG00000015899	INTS9	99	49.772	Chlorocebus_sabaeus
ENSCSAVG00000003803	-	87	51.724	ENSCHOG00000011676	INTS9	87	51.724	Choloepus_hoffmanni
ENSCSAVG00000003803	-	99	50.533	ENSCPBG00000019907	INTS9	99	50.533	Chrysemys_picta_bellii
ENSCSAVG00000003803	-	99	48.706	ENSCANG00000038080	INTS9	99	48.706	Colobus_angolensis_palliatus
ENSCSAVG00000003803	-	99	50.076	ENSCGRG00001024549	Ints9	98	50.989	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003803	-	99	50.076	ENSCGRG00000014306	Ints9	96	50.989	Cricetulus_griseus_crigri
ENSCSAVG00000003803	-	99	49.163	ENSCSEG00000019034	ints9	99	49.163	Cynoglossus_semilaevis
ENSCSAVG00000003803	-	99	49.315	ENSCVAG00000001559	ints9	99	49.315	Cyprinodon_variegatus
ENSCSAVG00000003803	-	99	49.772	ENSDARG00000067913	ints9	99	49.772	Danio_rerio
ENSCSAVG00000003803	-	99	49.772	ENSDNOG00000003821	INTS9	99	49.772	Dasypus_novemcinctus
ENSCSAVG00000003803	-	99	50.000	ENSDORG00000008604	Ints9	99	50.000	Dipodomys_ordii
ENSCSAVG00000003803	-	99	41.692	FBgn0036570	IntS9	99	41.692	Drosophila_melanogaster
ENSCSAVG00000003803	-	79	48.285	ENSETEG00000004286	INTS9	79	48.285	Echinops_telfairi
ENSCSAVG00000003803	-	99	50.077	ENSEBUG00000010143	ints9	99	50.077	Eptatretus_burgeri
ENSCSAVG00000003803	-	99	50.076	ENSEASG00005016353	INTS9	99	50.076	Equus_asinus_asinus
ENSCSAVG00000003803	-	99	50.076	ENSECAG00000019848	INTS9	99	50.076	Equus_caballus
ENSCSAVG00000003803	-	99	49.695	ENSELUG00000010313	ints9	99	49.695	Esox_lucius
ENSCSAVG00000003803	-	99	50.228	ENSFCAG00000003520	INTS9	99	50.228	Felis_catus
ENSCSAVG00000003803	-	99	50.228	ENSFALG00000010840	INTS9	99	50.760	Ficedula_albicollis
ENSCSAVG00000003803	-	99	49.772	ENSFDAG00000021050	INTS9	99	49.772	Fukomys_damarensis
ENSCSAVG00000003803	-	99	48.858	ENSFHEG00000022949	ints9	99	48.858	Fundulus_heteroclitus
ENSCSAVG00000003803	-	99	47.945	ENSGMOG00000005180	ints9	99	47.945	Gadus_morhua
ENSCSAVG00000003803	-	99	50.076	ENSGALG00000016631	INTS9	99	50.608	Gallus_gallus
ENSCSAVG00000003803	-	99	49.315	ENSGAFG00000009314	ints9	99	49.315	Gambusia_affinis
ENSCSAVG00000003803	-	99	48.706	ENSGACG00000004893	ints9	99	48.706	Gasterosteus_aculeatus
ENSCSAVG00000003803	-	96	50.157	ENSGAGG00000015959	INTS9	99	50.157	Gopherus_agassizii
ENSCSAVG00000003803	-	99	50.076	ENSGGOG00000017009	INTS9	99	50.076	Gorilla_gorilla
ENSCSAVG00000003803	-	99	49.315	ENSHBUG00000000821	ints9	99	49.315	Haplochromis_burtoni
ENSCSAVG00000003803	-	99	49.315	ENSHGLG00000005379	INTS9	99	49.315	Heterocephalus_glaber_female
ENSCSAVG00000003803	-	99	49.315	ENSHGLG00100010972	INTS9	99	49.315	Heterocephalus_glaber_male
ENSCSAVG00000003803	-	99	48.554	ENSHCOG00000019893	ints9	99	48.554	Hippocampus_comes
ENSCSAVG00000003803	-	99	49.619	ENSIPUG00000020540	ints9	99	49.619	Ictalurus_punctatus
ENSCSAVG00000003803	-	99	50.760	ENSSTOG00000011703	INTS9	99	50.760	Ictidomys_tridecemlineatus
ENSCSAVG00000003803	-	99	49.011	ENSKMAG00000003883	ints9	99	49.011	Kryptolebias_marmoratus
ENSCSAVG00000003803	-	99	49.011	ENSLBEG00000023003	ints9	99	49.011	Labrus_bergylta
ENSCSAVG00000003803	-	80	47.399	ENSLACG00000005787	INTS9	99	47.399	Latimeria_chalumnae
ENSCSAVG00000003803	-	99	49.772	ENSLOCG00000015999	ints9	99	49.772	Lepisosteus_oculatus
ENSCSAVG00000003803	-	99	49.619	ENSLAFG00000014628	INTS9	99	49.619	Loxodonta_africana
ENSCSAVG00000003803	-	99	49.772	ENSMFAG00000043511	INTS9	99	48.899	Macaca_fascicularis
ENSCSAVG00000003803	-	99	49.772	ENSMMUG00000019723	INTS9	99	49.772	Macaca_mulatta
ENSCSAVG00000003803	-	99	49.772	ENSMNEG00000035204	INTS9	99	49.772	Macaca_nemestrina
ENSCSAVG00000003803	-	99	49.772	ENSMLEG00000027845	INTS9	99	49.772	Mandrillus_leucophaeus
ENSCSAVG00000003803	-	99	49.011	ENSMAMG00000007772	ints9	99	49.011	Mastacembelus_armatus
ENSCSAVG00000003803	-	99	49.315	ENSMZEG00005003651	ints9	99	49.315	Maylandia_zebra
ENSCSAVG00000003803	-	99	50.076	ENSMGAG00000014182	INTS9	99	50.608	Meleagris_gallopavo
ENSCSAVG00000003803	-	99	50.076	ENSMAUG00000016286	Ints9	99	50.989	Mesocricetus_auratus
ENSCSAVG00000003803	-	99	48.858	ENSMICG00000010411	INTS9	99	48.677	Microcebus_murinus
ENSCSAVG00000003803	-	99	50.157	ENSMOCG00000009792	Ints9	99	49.392	Microtus_ochrogaster
ENSCSAVG00000003803	-	99	48.113	ENSMMOG00000015648	ints9	99	48.113	Mola_mola
ENSCSAVG00000003803	-	99	51.152	ENSMODG00000008755	INTS9	99	51.152	Monodelphis_domestica
ENSCSAVG00000003803	-	99	49.467	ENSMALG00000019769	ints9	99	49.467	Monopterus_albus
ENSCSAVG00000003803	-	99	49.924	MGP_CAROLIEiJ_G0019419	-	95	50.837	Mus_caroli
ENSCSAVG00000003803	-	99	50.228	ENSMUSG00000021975	Ints9	95	50.228	Mus_musculus
ENSCSAVG00000003803	-	99	49.924	MGP_PahariEiJ_G0030437	-	95	50.837	Mus_pahari
ENSCSAVG00000003803	-	99	49.924	MGP_SPRETEiJ_G0020311	-	95	50.837	Mus_spretus
ENSCSAVG00000003803	-	98	46.677	ENSMPUG00000000997	INTS9	98	46.677	Mustela_putorius_furo
ENSCSAVG00000003803	-	99	50.076	ENSMLUG00000012438	INTS9	99	50.076	Myotis_lucifugus
ENSCSAVG00000003803	-	99	49.467	ENSNGAG00000024198	Ints9	99	50.381	Nannospalax_galili
ENSCSAVG00000003803	-	99	46.154	ENSNBRG00000018303	ints9	99	46.154	Neolamprologus_brichardi
ENSCSAVG00000003803	-	99	49.772	ENSNLEG00000016658	INTS9	99	49.772	Nomascus_leucogenys
ENSCSAVG00000003803	-	98	45.426	ENSOPRG00000013568	INTS9	99	45.426	Ochotona_princeps
ENSCSAVG00000003803	-	99	48.402	ENSODEG00000007631	INTS9	99	48.402	Octodon_degus
ENSCSAVG00000003803	-	99	49.392	ENSONIG00000001202	ints9	99	49.392	Oreochromis_niloticus
ENSCSAVG00000003803	-	98	45.469	ENSOANG00000010536	INTS9	97	45.469	Ornithorhynchus_anatinus
ENSCSAVG00000003803	-	99	50.533	ENSOCUG00000015356	INTS9	99	50.533	Oryctolagus_cuniculus
ENSCSAVG00000003803	-	99	49.008	ENSORLG00000015930	ints9	99	49.008	Oryzias_latipes
ENSCSAVG00000003803	-	99	49.008	ENSORLG00020006084	ints9	99	49.008	Oryzias_latipes_hni
ENSCSAVG00000003803	-	99	49.008	ENSORLG00015001448	ints9	99	49.008	Oryzias_latipes_hsok
ENSCSAVG00000003803	-	99	49.008	ENSOMEG00000014390	ints9	99	49.008	Oryzias_melastigma
ENSCSAVG00000003803	-	99	49.315	ENSOGAG00000015946	INTS9	99	49.315	Otolemur_garnettii
ENSCSAVG00000003803	-	99	50.076	ENSOARG00000015017	INTS9	99	50.076	Ovis_aries
ENSCSAVG00000003803	-	99	50.076	ENSPPAG00000041473	INTS9	99	50.076	Pan_paniscus
ENSCSAVG00000003803	-	99	50.381	ENSPPRG00000005064	INTS9	99	50.381	Panthera_pardus
ENSCSAVG00000003803	-	99	50.381	ENSPTIG00000018770	INTS9	99	50.381	Panthera_tigris_altaica
ENSCSAVG00000003803	-	99	45.758	ENSPTRG00000020125	INTS9	99	45.758	Pan_troglodytes
ENSCSAVG00000003803	-	99	49.772	ENSPANG00000016305	INTS9	99	49.772	Papio_anubis
ENSCSAVG00000003803	-	99	49.772	ENSPKIG00000021742	ints9	99	49.772	Paramormyrops_kingsleyae
ENSCSAVG00000003803	-	96	51.101	ENSPSIG00000017113	INTS9	99	51.101	Pelodiscus_sinensis
ENSCSAVG00000003803	-	99	48.031	ENSPMGG00000016805	ints9	99	48.031	Periophthalmus_magnuspinnatus
ENSCSAVG00000003803	-	99	50.837	ENSPEMG00000023972	Ints9	99	49.772	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003803	-	70	47.788	ENSPMAG00000005987	ints9	99	47.788	Petromyzon_marinus
ENSCSAVG00000003803	-	99	50.912	ENSPCIG00000029178	INTS9	99	50.912	Phascolarctos_cinereus
ENSCSAVG00000003803	-	99	49.014	ENSPFOG00000012194	ints9	99	49.014	Poecilia_formosa
ENSCSAVG00000003803	-	99	49.163	ENSPLAG00000020521	ints9	99	49.163	Poecilia_latipinna
ENSCSAVG00000003803	-	99	49.315	ENSPMEG00000004545	ints9	99	49.315	Poecilia_mexicana
ENSCSAVG00000003803	-	99	49.163	ENSPREG00000018730	ints9	99	49.163	Poecilia_reticulata
ENSCSAVG00000003803	-	99	49.772	ENSPPYG00000018479	INTS9	99	49.772	Pongo_abelii
ENSCSAVG00000003803	-	99	48.402	ENSPCOG00000026338	INTS9	99	48.402	Propithecus_coquereli
ENSCSAVG00000003803	-	99	50.076	ENSPVAG00000007821	INTS9	99	50.076	Pteropus_vampyrus
ENSCSAVG00000003803	-	99	48.585	ENSPNYG00000021900	ints9	99	48.585	Pundamilia_nyererei
ENSCSAVG00000003803	-	99	49.619	ENSPNAG00000011555	ints9	99	49.619	Pygocentrus_nattereri
ENSCSAVG00000003803	-	99	49.924	ENSRNOG00000013459	LOC102549712	99	50.837	Rattus_norvegicus
ENSCSAVG00000003803	-	99	49.924	ENSRBIG00000038084	INTS9	99	49.924	Rhinopithecus_bieti
ENSCSAVG00000003803	-	99	49.924	ENSRROG00000040531	INTS9	99	49.924	Rhinopithecus_roxellana
ENSCSAVG00000003803	-	99	49.924	ENSSBOG00000034897	INTS9	99	49.924	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003803	-	99	49.315	ENSSFOG00015001945	ints9	99	49.315	Scleropages_formosus
ENSCSAVG00000003803	-	99	48.858	ENSSMAG00000004512	ints9	99	48.858	Scophthalmus_maximus
ENSCSAVG00000003803	-	99	49.315	ENSSDUG00000006662	ints9	99	49.315	Seriola_dumerili
ENSCSAVG00000003803	-	99	49.467	ENSSLDG00000004386	ints9	99	49.467	Seriola_lalandi_dorsalis
ENSCSAVG00000003803	-	99	48.097	ENSSPUG00000003374	INTS9	99	48.936	Sphenodon_punctatus
ENSCSAVG00000003803	-	99	49.011	ENSSPAG00000013106	ints9	99	49.011	Stegastes_partitus
ENSCSAVG00000003803	-	99	50.685	ENSSSCG00000009681	INTS9	99	50.696	Sus_scrofa
ENSCSAVG00000003803	-	99	49.924	ENSTGUG00000013325	INTS9	99	50.456	Taeniopygia_guttata
ENSCSAVG00000003803	-	99	48.706	ENSTRUG00000006014	ints9	99	48.706	Takifugu_rubripes
ENSCSAVG00000003803	-	99	48.788	ENSTNIG00000009717	ints9	99	48.788	Tetraodon_nigroviridis
ENSCSAVG00000003803	-	91	46.500	ENSTBEG00000016188	INTS9	90	46.500	Tupaia_belangeri
ENSCSAVG00000003803	-	99	48.402	ENSTTRG00000009079	INTS9	99	48.402	Tursiops_truncatus
ENSCSAVG00000003803	-	99	49.772	ENSUMAG00000022190	INTS9	99	49.772	Ursus_maritimus
ENSCSAVG00000003803	-	99	49.924	ENSVVUG00000003168	INTS9	99	49.924	Vulpes_vulpes
ENSCSAVG00000003803	-	99	49.315	ENSXMAG00000010715	ints9	99	49.315	Xiphophorus_maculatus