EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003835 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1278 bases
Position: chrreftig_151:411459-412736
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006406	ResIII	PF04851.15	1.4e-06	1	1
ENSCSAVP00000006406	DEAD	PF00270.29	1.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006486	-	1182	-	ENSCSAVP00000006406	394 (aa)	-	H2YM54

Gene Model

Click here to download ENSCSAVG00000003835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003835	-	86	30.571	ENSCSAVG00000002180	-	91	30.571
ENSCSAVG00000003835	-	83	30.814	ENSCSAVG00000003023	-	58	31.548
ENSCSAVG00000003835	-	98	30.769	ENSCSAVG00000002353	-	70	31.673
ENSCSAVG00000003835	-	84	32.303	ENSCSAVG00000000522	-	80	32.303
ENSCSAVG00000003835	-	82	31.642	ENSCSAVG00000008916	-	94	32.012
ENSCSAVG00000003835	-	88	33.065	ENSCSAVG00000004304	-	57	33.244
ENSCSAVG00000003835	-	71	32.154	ENSCSAVG00000004158	-	62	32.154
ENSCSAVG00000003835	-	75	31.290	ENSCSAVG00000006949	-	61	31.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003835	-	98	54.500	ENSG00000278053	DDX52	77	57.303	Homo_sapiens
ENSCSAVG00000003835	-	99	54.000	ENSAPOG00000008759	ddx52	54	55.208	Acanthochromis_polyacanthus
ENSCSAVG00000003835	-	98	54.250	ENSAMEG00000013159	DDX52	65	54.987	Ailuropoda_melanoleuca
ENSCSAVG00000003835	-	90	55.769	ENSACIG00000002843	ddx52	64	56.077	Amphilophus_citrinellus
ENSCSAVG00000003835	-	100	53.171	ENSAOCG00000000356	-	55	54.897	Amphiprion_ocellaris
ENSCSAVG00000003835	-	96	54.897	ENSAOCG00000007983	ddx52	63	54.897	Amphiprion_ocellaris
ENSCSAVG00000003835	-	96	54.897	ENSAPEG00000023456	ddx52	55	54.897	Amphiprion_percula
ENSCSAVG00000003835	-	95	55.469	ENSATEG00000021525	ddx52	56	55.469	Anabas_testudineus
ENSCSAVG00000003835	-	98	53.283	ENSACAG00000006395	DDX52	74	54.005	Anolis_carolinensis
ENSCSAVG00000003835	-	98	54.500	ENSANAG00000028587	DDX52	64	54.987	Aotus_nancymaae
ENSCSAVG00000003835	-	98	53.788	ENSACLG00000021447	ddx52	61	53.846	Astatotilapia_calliptera
ENSCSAVG00000003835	-	95	56.250	ENSAMXG00000024377	ddx52	61	56.250	Astyanax_mexicanus
ENSCSAVG00000003835	-	98	54.250	ENSBTAG00000010313	DDX52	65	54.731	Bos_taurus
ENSCSAVG00000003835	-	96	45.750	WBGene00011032	R05D11.4	67	45.750	Caenorhabditis_elegans
ENSCSAVG00000003835	-	98	54.250	ENSCJAG00000015190	DDX52	64	54.731	Callithrix_jacchus
ENSCSAVG00000003835	-	99	53.827	ENSCAFG00000018145	-	64	54.731	Canis_familiaris
ENSCSAVG00000003835	-	99	53.580	ENSCAFG00000013554	-	65	54.476	Canis_familiaris
ENSCSAVG00000003835	-	96	54.731	ENSCAFG00020003753	DDX52	65	54.731	Canis_lupus_dingo
ENSCSAVG00000003835	-	98	54.523	ENSCHIG00000006275	DDX52	66	54.987	Capra_hircus
ENSCSAVG00000003835	-	98	54.750	ENSTSYG00000002996	DDX52	64	55.243	Carlito_syrichta
ENSCSAVG00000003835	-	98	42.965	ENSCAPG00000010436	DDX52	68	43.188	Cavia_aperea
ENSCSAVG00000003835	-	98	53.750	ENSCPOG00000001232	DDX52	65	54.220	Cavia_porcellus
ENSCSAVG00000003835	-	99	53.827	ENSCCAG00000023213	DDX52	64	54.731	Cebus_capucinus
ENSCSAVG00000003835	-	98	54.750	ENSCATG00000041437	DDX52	64	55.243	Cercocebus_atys
ENSCSAVG00000003835	-	98	54.000	ENSCLAG00000016292	DDX52	65	54.476	Chinchilla_lanigera
ENSCSAVG00000003835	-	98	54.750	ENSCSAG00000006122	DDX52	64	55.243	Chlorocebus_sabaeus
ENSCSAVG00000003835	-	96	54.220	ENSCPBG00000009806	DDX52	61	54.220	Chrysemys_picta_bellii
ENSCSAVG00000003835	-	100	69.451	ENSCING00000016218	-	85	70.545	Ciona_intestinalis
ENSCSAVG00000003835	-	98	55.000	ENSCANG00000035140	DDX52	65	55.499	Colobus_angolensis_palliatus
ENSCSAVG00000003835	-	98	53.769	ENSCGRG00001020695	Ddx52	64	54.220	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003835	-	98	53.518	ENSCGRG00000008830	Ddx52	64	53.964	Cricetulus_griseus_crigri
ENSCSAVG00000003835	-	95	55.469	ENSCSEG00000010008	ddx52	57	55.469	Cynoglossus_semilaevis
ENSCSAVG00000003835	-	95	56.250	ENSCVAG00000005302	ddx52	65	56.250	Cyprinodon_variegatus
ENSCSAVG00000003835	-	95	53.125	ENSDARG00000100505	ddx52	63	53.125	Danio_rerio
ENSCSAVG00000003835	-	98	54.500	ENSDNOG00000047454	DDX52	64	54.987	Dasypus_novemcinctus
ENSCSAVG00000003835	-	98	54.271	ENSDORG00000004276	Ddx52	65	54.476	Dipodomys_ordii
ENSCSAVG00000003835	-	95	50.785	FBgn0036754	CG5589	64	50.785	Drosophila_melanogaster
ENSCSAVG00000003835	-	94	49.344	ENSETEG00000016042	DDX52	65	49.344	Echinops_telfairi
ENSCSAVG00000003835	-	84	39.943	ENSEBUG00000010838	-	81	38.859	Eptatretus_burgeri
ENSCSAVG00000003835	-	98	53.750	ENSEASG00005011275	DDX52	60	54.220	Equus_asinus_asinus
ENSCSAVG00000003835	-	98	54.000	ENSECAG00000012286	DDX52	65	54.476	Equus_caballus
ENSCSAVG00000003835	-	90	57.182	ENSELUG00000018002	ddx52	64	57.182	Esox_lucius
ENSCSAVG00000003835	-	98	54.000	ENSFCAG00000010573	DDX52	65	54.476	Felis_catus
ENSCSAVG00000003835	-	98	55.838	ENSFALG00000005155	DDX52	65	55.867	Ficedula_albicollis
ENSCSAVG00000003835	-	98	49.749	ENSFDAG00000011133	-	63	50.129	Fukomys_damarensis
ENSCSAVG00000003835	-	98	54.208	ENSFDAG00000008340	-	65	54.684	Fukomys_damarensis
ENSCSAVG00000003835	-	95	55.729	ENSFHEG00000017239	ddx52	58	55.729	Fundulus_heteroclitus
ENSCSAVG00000003835	-	96	53.985	ENSGMOG00000014879	ddx52	70	53.985	Gadus_morhua
ENSCSAVG00000003835	-	98	54.523	ENSGALG00000005489	DDX52	63	55.297	Gallus_gallus
ENSCSAVG00000003835	-	95	55.990	ENSGAFG00000000702	ddx52	60	55.990	Gambusia_affinis
ENSCSAVG00000003835	-	98	53.788	ENSGACG00000020624	ddx52	80	54.427	Gasterosteus_aculeatus
ENSCSAVG00000003835	-	96	54.220	ENSGAGG00000007234	DDX52	61	54.220	Gopherus_agassizii
ENSCSAVG00000003835	-	98	54.500	ENSGGOG00000028224	DDX52	64	54.987	Gorilla_gorilla
ENSCSAVG00000003835	-	98	53.788	ENSHBUG00000015638	ddx52	56	54.688	Haplochromis_burtoni
ENSCSAVG00000003835	-	90	44.818	ENSHGLG00000019205	-	64	44.818	Heterocephalus_glaber_female
ENSCSAVG00000003835	-	97	54.684	ENSHGLG00000006235	-	65	54.987	Heterocephalus_glaber_female
ENSCSAVG00000003835	-	97	55.051	ENSHGLG00100013765	-	72	54.987	Heterocephalus_glaber_male
ENSCSAVG00000003835	-	90	44.818	ENSHGLG00100018699	-	65	44.818	Heterocephalus_glaber_male
ENSCSAVG00000003835	-	95	56.072	ENSHCOG00000007966	ddx52	69	56.072	Hippocampus_comes
ENSCSAVG00000003835	-	99	54.364	ENSIPUG00000008623	ddx52	62	55.208	Ictalurus_punctatus
ENSCSAVG00000003835	-	54	53.097	ENSSTOG00000002550	DDX52	69	53.097	Ictidomys_tridecemlineatus
ENSCSAVG00000003835	-	98	53.924	ENSJJAG00000021877	Ddx52	64	54.124	Jaculus_jaculus
ENSCSAVG00000003835	-	100	54.455	ENSKMAG00000022270	ddx52	93	55.526	Kryptolebias_marmoratus
ENSCSAVG00000003835	-	95	55.729	ENSLBEG00000015403	ddx52	57	55.729	Labrus_bergylta
ENSCSAVG00000003835	-	95	53.866	ENSLACG00000012514	DDX52	62	53.866	Latimeria_chalumnae
ENSCSAVG00000003835	-	65	52.679	ENSLOCG00000005928	ddx52	60	52.679	Lepisosteus_oculatus
ENSCSAVG00000003835	-	98	52.792	ENSLAFG00000002635	DDX52	96	53.867	Loxodonta_africana
ENSCSAVG00000003835	-	98	54.750	ENSMFAG00000000640	DDX52	64	55.243	Macaca_fascicularis
ENSCSAVG00000003835	-	98	54.750	ENSMMUG00000002980	DDX52	64	55.243	Macaca_mulatta
ENSCSAVG00000003835	-	98	54.500	ENSMNEG00000043658	DDX52	64	54.987	Macaca_nemestrina
ENSCSAVG00000003835	-	98	54.750	ENSMLEG00000017518	DDX52	64	55.243	Mandrillus_leucophaeus
ENSCSAVG00000003835	-	95	56.510	ENSMAMG00000019719	ddx52	57	56.510	Mastacembelus_armatus
ENSCSAVG00000003835	-	98	53.788	ENSMZEG00005019044	ddx52	56	54.688	Maylandia_zebra
ENSCSAVG00000003835	-	98	54.774	ENSMGAG00000008091	DDX52	67	55.039	Meleagris_gallopavo
ENSCSAVG00000003835	-	98	53.769	ENSMAUG00000021084	Ddx52	65	54.220	Mesocricetus_auratus
ENSCSAVG00000003835	-	96	47.826	ENSMICG00000004290	-	65	47.315	Microcebus_murinus
ENSCSAVG00000003835	-	98	54.020	ENSMOCG00000009654	Ddx52	65	54.220	Microtus_ochrogaster
ENSCSAVG00000003835	-	100	54.839	ENSMMOG00000018825	ddx52	62	55.729	Mola_mola
ENSCSAVG00000003835	-	98	54.774	ENSMODG00000002493	DDX52	64	55.076	Monodelphis_domestica
ENSCSAVG00000003835	-	95	55.990	ENSMALG00000007621	ddx52	65	55.990	Monopterus_albus
ENSCSAVG00000003835	-	98	54.774	MGP_CAROLIEiJ_G0016888	Ddx52	65	54.987	Mus_caroli
ENSCSAVG00000003835	-	98	54.774	ENSMUSG00000020677	Ddx52	65	54.987	Mus_musculus
ENSCSAVG00000003835	-	98	54.523	MGP_PahariEiJ_G0018018	Ddx52	65	54.731	Mus_pahari
ENSCSAVG00000003835	-	98	54.774	MGP_SPRETEiJ_G0017733	Ddx52	65	54.987	Mus_spretus
ENSCSAVG00000003835	-	98	54.250	ENSMPUG00000015007	DDX52	64	54.731	Mustela_putorius_furo
ENSCSAVG00000003835	-	98	53.865	ENSMLUG00000007167	-	65	54.756	Myotis_lucifugus
ENSCSAVG00000003835	-	98	54.177	ENSMLUG00000024480	-	79	54.639	Myotis_lucifugus
ENSCSAVG00000003835	-	98	53.924	ENSNGAG00000020686	Ddx52	65	54.124	Nannospalax_galili
ENSCSAVG00000003835	-	95	54.427	ENSNBRG00000007750	ddx52	69	53.590	Neolamprologus_brichardi
ENSCSAVG00000003835	-	98	54.500	ENSNLEG00000002826	DDX52	65	54.987	Nomascus_leucogenys
ENSCSAVG00000003835	-	95	53.506	ENSMEUG00000011234	DDX52	93	54.497	Notamacropus_eugenii
ENSCSAVG00000003835	-	98	47.132	ENSOPRG00000003899	DDX52	65	46.954	Ochotona_princeps
ENSCSAVG00000003835	-	98	52.750	ENSODEG00000002857	-	70	53.197	Octodon_degus
ENSCSAVG00000003835	-	98	53.964	ENSODEG00000012814	-	66	54.427	Octodon_degus
ENSCSAVG00000003835	-	98	53.788	ENSONIG00000004869	ddx52	61	54.688	Oreochromis_niloticus
ENSCSAVG00000003835	-	98	54.500	ENSOANG00000007133	DDX52	65	55.216	Ornithorhynchus_anatinus
ENSCSAVG00000003835	-	98	53.500	ENSOCUG00000014532	DDX52	64	53.964	Oryctolagus_cuniculus
ENSCSAVG00000003835	-	95	55.208	ENSORLG00000005241	ddx52	59	55.208	Oryzias_latipes
ENSCSAVG00000003835	-	95	54.948	ENSORLG00015015546	ddx52	57	54.948	Oryzias_latipes_hsok
ENSCSAVG00000003835	-	98	54.293	ENSOMEG00000017602	ddx52	58	54.948	Oryzias_melastigma
ENSCSAVG00000003835	-	98	51.750	ENSOGAG00000000868	DDX52	66	52.174	Otolemur_garnettii
ENSCSAVG00000003835	-	98	54.500	ENSOARG00000002998	DDX52	65	54.987	Ovis_aries
ENSCSAVG00000003835	-	98	54.500	ENSPPAG00000028453	DDX52	66	54.987	Pan_paniscus
ENSCSAVG00000003835	-	98	54.000	ENSPPRG00000009742	DDX52	66	54.476	Panthera_pardus
ENSCSAVG00000003835	-	98	53.750	ENSPTIG00000013697	DDX52	66	54.220	Panthera_tigris_altaica
ENSCSAVG00000003835	-	98	54.500	ENSPTRG00000009058	DDX52	64	54.987	Pan_troglodytes
ENSCSAVG00000003835	-	98	54.500	ENSPANG00000022101	DDX52	64	54.987	Papio_anubis
ENSCSAVG00000003835	-	99	53.133	ENSPKIG00000013058	ddx52	67	53.453	Paramormyrops_kingsleyae
ENSCSAVG00000003835	-	96	53.453	ENSPSIG00000010226	DDX52	64	53.453	Pelodiscus_sinensis
ENSCSAVG00000003835	-	95	56.658	ENSPMGG00000005458	ddx52	76	56.658	Periophthalmus_magnuspinnatus
ENSCSAVG00000003835	-	98	53.769	ENSPEMG00000003263	Ddx52	65	54.220	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003835	-	98	55.639	ENSPCIG00000017730	DDX52	59	55.949	Phascolarctos_cinereus
ENSCSAVG00000003835	-	95	55.990	ENSPFOG00000018378	ddx52	58	55.990	Poecilia_formosa
ENSCSAVG00000003835	-	95	55.990	ENSPLAG00000008368	ddx52	58	55.990	Poecilia_latipinna
ENSCSAVG00000003835	-	95	55.990	ENSPMEG00000002359	ddx52	58	55.990	Poecilia_mexicana
ENSCSAVG00000003835	-	95	55.729	ENSPREG00000016874	ddx52	58	55.729	Poecilia_reticulata
ENSCSAVG00000003835	-	98	54.500	ENSPPYG00000008221	DDX52	64	55.297	Pongo_abelii
ENSCSAVG00000003835	-	98	50.630	ENSPCAG00000005814	DDX52	65	51.031	Procavia_capensis
ENSCSAVG00000003835	-	99	54.321	ENSPVAG00000010462	DDX52	65	55.243	Pteropus_vampyrus
ENSCSAVG00000003835	-	98	53.788	ENSPNYG00000020730	ddx52	70	53.846	Pundamilia_nyererei
ENSCSAVG00000003835	-	95	55.990	ENSPNAG00000014707	ddx52	62	55.990	Pygocentrus_nattereri
ENSCSAVG00000003835	-	98	54.271	ENSRNOG00000002612	Ddx52	65	54.476	Rattus_norvegicus
ENSCSAVG00000003835	-	98	51.392	ENSRBIG00000032462	DDX52	64	51.813	Rhinopithecus_bieti
ENSCSAVG00000003835	-	98	47.859	ENSRROG00000034760	DDX52	63	48.196	Rhinopithecus_roxellana
ENSCSAVG00000003835	-	95	43.367	YGL171W	-	69	43.367	Saccharomyces_cerevisiae
ENSCSAVG00000003835	-	98	54.250	ENSSBOG00000035787	DDX52	64	55.297	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003835	-	98	55.276	ENSSHAG00000013962	DDX52	63	55.725	Sarcophilus_harrisii
ENSCSAVG00000003835	-	99	55.611	ENSSFOG00015005055	ddx52	69	56.266	Scleropages_formosus
ENSCSAVG00000003835	-	95	55.729	ENSSMAG00000009788	ddx52	57	55.729	Scophthalmus_maximus
ENSCSAVG00000003835	-	95	55.469	ENSSDUG00000004022	ddx52	58	55.469	Seriola_dumerili
ENSCSAVG00000003835	-	95	55.729	ENSSLDG00000016999	ddx52	66	55.729	Seriola_lalandi_dorsalis
ENSCSAVG00000003835	-	95	53.747	ENSSPUG00000000720	DDX52	60	53.747	Sphenodon_punctatus
ENSCSAVG00000003835	-	96	54.639	ENSSPAG00000014211	ddx52	55	54.359	Stegastes_partitus
ENSCSAVG00000003835	-	98	53.500	ENSSSCG00000021275	DDX52	64	53.964	Sus_scrofa
ENSCSAVG00000003835	-	98	56.345	ENSTGUG00000008303	-	67	55.838	Taeniopygia_guttata
ENSCSAVG00000003835	-	97	54.822	ENSTRUG00000017071	ddx52	56	54.897	Takifugu_rubripes
ENSCSAVG00000003835	-	98	56.061	ENSTNIG00000009990	ddx52	65	56.771	Tetraodon_nigroviridis
ENSCSAVG00000003835	-	98	53.750	ENSTTRG00000008917	DDX52	65	54.220	Tursiops_truncatus
ENSCSAVG00000003835	-	100	53.202	ENSVPAG00000001979	DDX52	65	54.220	Vicugna_pacos
ENSCSAVG00000003835	-	99	53.580	ENSVVUG00000020209	DDX52	75	54.476	Vulpes_vulpes
ENSCSAVG00000003835	-	98	53.202	ENSXETG00000025903	ddx52	66	53.093	Xenopus_tropicalis
ENSCSAVG00000003835	-	95	55.729	ENSXMAG00000010805	ddx52	58	55.729	Xiphophorus_maculatus