EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003895 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 929 bases
Position: chrreftig_12:1658402-1659330
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006506	zf-C2H2	PF00096.26	8.3e-19	1	4
ENSCSAVP00000006506	zf-C2H2	PF00096.26	8.3e-19	2	4
ENSCSAVP00000006506	zf-C2H2	PF00096.26	8.3e-19	3	4
ENSCSAVP00000006506	zf-C2H2	PF00096.26	8.3e-19	4	4
ENSCSAVP00000006506	zf-met	PF12874.7	9.4e-14	1	3
ENSCSAVP00000006506	zf-met	PF12874.7	9.4e-14	2	3
ENSCSAVP00000006506	zf-met	PF12874.7	9.4e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006589	-	929	-	ENSCSAVP00000006506	112 (aa)	-	H2YMF4

Gene Model

Click here to download ENSCSAVG00000003895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003895	-	100	46.988	ENSCSAVG00000007589	-	100	46.988
ENSCSAVG00000003895	-	99	40.909	ENSCSAVG00000009739	-	61	40.909
ENSCSAVG00000003895	-	100	47.664	ENSCSAVG00000001830	-	99	47.664
ENSCSAVG00000003895	-	100	48.182	ENSCSAVG00000000642	-	100	48.182
ENSCSAVG00000003895	-	100	48.182	ENSCSAVG00000000649	-	99	48.182
ENSCSAVG00000003895	-	100	51.351	ENSCSAVG00000006141	-	100	51.351
ENSCSAVG00000003895	-	100	51.471	ENSCSAVG00000001989	-	99	51.471
ENSCSAVG00000003895	-	100	52.381	ENSCSAVG00000001808	-	100	52.381
ENSCSAVG00000003895	-	100	39.450	ENSCSAVG00000001949	-	95	39.450
ENSCSAVG00000003895	-	100	48.649	ENSCSAVG00000004678	-	99	48.649
ENSCSAVG00000003895	-	100	49.153	ENSCSAVG00000008862	-	100	49.107
ENSCSAVG00000003895	-	100	49.091	ENSCSAVG00000006608	-	99	49.091
ENSCSAVG00000003895	-	100	49.091	ENSCSAVG00000000520	-	99	49.091
ENSCSAVG00000003895	-	100	50.000	ENSCSAVG00000000293	-	99	50.000
ENSCSAVG00000003895	-	99	39.286	ENSCSAVG00000011146	-	80	39.286
ENSCSAVG00000003895	-	100	42.683	ENSCSAVG00000004543	-	99	42.683
ENSCSAVG00000003895	-	100	38.554	ENSCSAVG00000003690	-	95	38.554
ENSCSAVG00000003895	-	100	37.383	ENSCSAVG00000006745	-	92	37.383
ENSCSAVG00000003895	-	100	51.111	ENSCSAVG00000004499	-	100	51.685
ENSCSAVG00000003895	-	100	50.000	ENSCSAVG00000004703	-	100	50.000
ENSCSAVG00000003895	-	99	37.391	ENSCSAVG00000006729	-	68	37.391
ENSCSAVG00000003895	-	100	44.828	ENSCSAVG00000002179	-	100	44.828
ENSCSAVG00000003895	-	99	49.550	ENSCSAVG00000009953	-	99	49.550
ENSCSAVG00000003895	-	100	49.550	ENSCSAVG00000009574	-	99	49.550
ENSCSAVG00000003895	-	100	48.214	ENSCSAVG00000000673	-	100	48.214
ENSCSAVG00000003895	-	100	50.575	ENSCSAVG00000000655	-	99	50.575
ENSCSAVG00000003895	-	100	46.847	ENSCSAVG00000004762	-	99	46.847
ENSCSAVG00000003895	-	99	47.748	ENSCSAVG00000007918	-	100	47.748
ENSCSAVG00000003895	-	100	48.649	ENSCSAVG00000010156	-	92	48.649
ENSCSAVG00000003895	-	98	34.259	ENSCSAVG00000011749	-	72	34.259
ENSCSAVG00000003895	-	100	48.889	ENSCSAVG00000000690	-	99	48.182
ENSCSAVG00000003895	-	100	44.211	ENSCSAVG00000005904	-	95	44.211
ENSCSAVG00000003895	-	99	42.308	ENSCSAVG00000009819	-	69	42.308
ENSCSAVG00000003895	-	100	50.450	ENSCSAVG00000001834	-	100	50.450
ENSCSAVG00000003895	-	98	40.000	ENSCSAVG00000006028	-	51	40.000
ENSCSAVG00000003895	-	100	48.649	ENSCSAVG00000009583	-	100	48.182
ENSCSAVG00000003895	-	100	46.512	ENSCSAVG00000009217	-	90	46.512
ENSCSAVG00000003895	-	100	48.649	ENSCSAVG00000010960	-	100	48.649
ENSCSAVG00000003895	-	100	45.946	ENSCSAVG00000006650	-	100	44.545
ENSCSAVG00000003895	-	100	38.182	ENSCSAVG00000005896	-	68	38.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003895	-	99	42.857	ENSACIG00000017166	-	54	42.857	Amphilophus_citrinellus
ENSCSAVG00000003895	-	100	39.024	ENSAOCG00000018579	-	58	39.024	Amphiprion_ocellaris
ENSCSAVG00000003895	-	100	40.741	ENSAPEG00000007889	-	73	40.741	Amphiprion_percula
ENSCSAVG00000003895	-	99	41.667	ENSAPEG00000019755	-	76	41.667	Amphiprion_percula
ENSCSAVG00000003895	-	98	33.333	WBGene00021374	Y37E11B.1	80	33.333	Caenorhabditis_elegans
ENSCSAVG00000003895	-	100	37.143	ENSCING00000004861	zf(c2h2)-12	63	38.739	Ciona_intestinalis
ENSCSAVG00000003895	-	100	35.135	ENSCING00000005713	-	68	35.135	Ciona_intestinalis
ENSCSAVG00000003895	-	100	36.449	ENSCSEG00000005491	-	69	36.449	Cynoglossus_semilaevis
ENSCSAVG00000003895	-	100	40.952	ENSCVAG00000016098	-	59	40.952	Cyprinodon_variegatus
ENSCSAVG00000003895	-	100	40.909	ENSCVAG00000002295	-	77	40.909	Cyprinodon_variegatus
ENSCSAVG00000003895	-	100	35.780	ENSCVAG00000002502	-	92	35.780	Cyprinodon_variegatus
ENSCSAVG00000003895	-	99	40.566	FBgn0028895	CG17328	51	40.566	Drosophila_melanogaster
ENSCSAVG00000003895	-	100	38.889	FBgn0030012	CG18262	52	38.889	Drosophila_melanogaster
ENSCSAVG00000003895	-	100	42.353	FBgn0037722	CG8319	60	42.353	Drosophila_melanogaster
ENSCSAVG00000003895	-	99	39.024	FBgn0033934	CG17385	59	39.024	Drosophila_melanogaster
ENSCSAVG00000003895	-	99	43.243	ENSEBUG00000004841	-	83	43.243	Eptatretus_burgeri
ENSCSAVG00000003895	-	100	43.243	ENSEBUG00000015522	-	67	43.243	Eptatretus_burgeri
ENSCSAVG00000003895	-	100	45.614	ENSEBUG00000008392	-	74	43.860	Eptatretus_burgeri
ENSCSAVG00000003895	-	100	45.946	ENSEBUG00000000735	-	97	45.946	Eptatretus_burgeri
ENSCSAVG00000003895	-	100	43.103	ENSFHEG00000020889	-	73	43.103	Fundulus_heteroclitus
ENSCSAVG00000003895	-	100	44.144	ENSFHEG00000013644	-	76	44.144	Fundulus_heteroclitus
ENSCSAVG00000003895	-	100	43.636	ENSFHEG00000012990	-	91	43.636	Fundulus_heteroclitus
ENSCSAVG00000003895	-	100	45.455	ENSGACG00000018415	-	99	45.455	Gasterosteus_aculeatus
ENSCSAVG00000003895	-	99	38.462	ENSHCOG00000017437	-	70	38.372	Hippocampus_comes
ENSCSAVG00000003895	-	99	37.931	ENSHCOG00000008181	-	69	37.931	Hippocampus_comes
ENSCSAVG00000003895	-	99	42.342	ENSHCOG00000014881	-	53	42.342	Hippocampus_comes
ENSCSAVG00000003895	-	100	42.268	ENSKMAG00000012909	-	82	42.268	Kryptolebias_marmoratus
ENSCSAVG00000003895	-	100	42.857	ENSKMAG00000007658	-	74	42.857	Kryptolebias_marmoratus
ENSCSAVG00000003895	-	93	37.143	ENSMMOG00000001961	-	88	37.143	Mola_mola
ENSCSAVG00000003895	-	99	39.241	ENSONIG00000009894	-	77	39.241	Oreochromis_niloticus
ENSCSAVG00000003895	-	100	41.441	ENSONIG00000007812	-	99	41.441	Oreochromis_niloticus
ENSCSAVG00000003895	-	99	38.095	ENSONIG00000003224	-	93	38.095	Oreochromis_niloticus
ENSCSAVG00000003895	-	100	44.578	ENSONIG00000016416	-	97	44.578	Oreochromis_niloticus
ENSCSAVG00000003895	-	100	37.383	ENSONIG00000003471	-	93	37.383	Oreochromis_niloticus
ENSCSAVG00000003895	-	99	40.952	ENSORLG00015018254	-	87	40.952	Oryzias_latipes_hsok
ENSCSAVG00000003895	-	99	43.299	ENSOMEG00000017673	-	68	43.299	Oryzias_melastigma
ENSCSAVG00000003895	-	100	38.983	ENSPMGG00000000243	-	67	37.037	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	97	39.623	ENSPMGG00000019842	-	57	39.623	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	40.000	ENSPMGG00000000458	-	95	39.286	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	99	42.342	ENSPMGG00000010664	-	91	42.342	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	39.583	ENSPMGG00000000489	-	84	39.583	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	41.818	ENSPMGG00000000218	-	63	41.818	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	39.286	ENSPMGG00000010563	-	73	39.286	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	42.453	ENSPMGG00000022524	-	95	40.449	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	40.476	ENSPMGG00000012289	-	69	40.476	Periophthalmus_magnuspinnatus
ENSCSAVG00000003895	-	100	41.667	ENSPMAG00000007983	-	86	41.667	Petromyzon_marinus
ENSCSAVG00000003895	-	99	44.144	ENSPFOG00000002879	-	99	44.144	Poecilia_formosa
ENSCSAVG00000003895	-	100	41.964	ENSPLAG00000006174	-	70	41.964	Poecilia_latipinna
ENSCSAVG00000003895	-	99	43.103	ENSPLAG00000011254	-	56	43.103	Poecilia_latipinna
ENSCSAVG00000003895	-	99	43.103	ENSPMEG00000007503	-	57	43.103	Poecilia_mexicana
ENSCSAVG00000003895	-	100	44.545	ENSPMEG00000022676	-	99	44.545	Poecilia_mexicana
ENSCSAVG00000003895	-	99	39.286	ENSPMEG00000019229	-	54	39.286	Poecilia_mexicana
ENSCSAVG00000003895	-	100	40.541	ENSPREG00000016204	-	61	40.541	Poecilia_reticulata
ENSCSAVG00000003895	-	99	55.556	ENSSDUG00000000946	-	97	45.946	Seriola_dumerili
ENSCSAVG00000003895	-	99	41.772	ENSSLDG00000002515	-	65	41.772	Seriola_lalandi_dorsalis
ENSCSAVG00000003895	-	100	39.252	ENSTNIG00000008154	-	58	39.252	Tetraodon_nigroviridis