EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2168 bases
Position: chrreftig_905:11895-14062
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006546	PWI	PF01480.17	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006629	-	1025	-	ENSCSAVP00000006546	205 (aa)	-	H2YMJ4

Gene Model

Click here to download ENSCSAVG00000003919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003919	-	77	68.098	ENSG00000133226	SRRM1	96	77.632	Homo_sapiens
ENSCSAVG00000003919	-	95	58.247	ENSACIG00000023398	-	52	73.600	Amphilophus_citrinellus
ENSCSAVG00000003919	-	67	72.263	ENSACLG00000019786	-	53	73.600	Astatotilapia_calliptera
ENSCSAVG00000003919	-	95	60.000	ENSAMXG00000040320	-	73	74.359	Astyanax_mexicanus
ENSCSAVG00000003919	-	81	77.108	ENSCING00000022242	-	79	87.200	Ciona_intestinalis
ENSCSAVG00000003919	-	94	60.000	ENSCVAG00000000504	-	75	70.115	Cyprinodon_variegatus
ENSCSAVG00000003919	-	82	68.421	ENSDORG00000028601	-	66	73.600	Dipodomys_ordii
ENSCSAVG00000003919	-	64	69.697	ENSFALG00000000476	SRRM1	97	75.362	Ficedula_albicollis
ENSCSAVG00000003919	-	66	72.593	ENSFHEG00000007359	-	87	71.765	Fundulus_heteroclitus
ENSCSAVG00000003919	-	67	72.263	ENSGALG00000001283	SRRM1	96	77.632	Gallus_gallus
ENSCSAVG00000003919	-	94	59.487	ENSGAFG00000019431	-	51	73.600	Gambusia_affinis
ENSCSAVG00000003919	-	65	65.672	ENSHGLG00100017918	-	93	65.600	Heterocephalus_glaber_male
ENSCSAVG00000003919	-	67	72.263	ENSMZEG00005006344	-	53	73.600	Maylandia_zebra
ENSCSAVG00000003919	-	95	58.974	ENSMMOG00000002390	-	77	76.923	Mola_mola
ENSCSAVG00000003919	-	97	51.232	ENSMALG00000010813	-	53	62.791	Monopterus_albus
ENSCSAVG00000003919	-	99	59.113	MGP_CAROLIEiJ_G0026636	Srrm1	63	73.600	Mus_caroli
ENSCSAVG00000003919	-	99	59.113	ENSMUSG00000028809	Srrm1	63	73.600	Mus_musculus
ENSCSAVG00000003919	-	99	59.113	MGP_PahariEiJ_G0028969	Srrm1	63	73.600	Mus_pahari
ENSCSAVG00000003919	-	99	59.113	MGP_SPRETEiJ_G0027616	Srrm1	63	73.600	Mus_spretus
ENSCSAVG00000003919	-	99	59.113	ENSMPUG00000015831	-	59	73.600	Mustela_putorius_furo
ENSCSAVG00000003919	-	97	58.706	ENSNBRG00000010911	-	51	73.600	Neolamprologus_brichardi
ENSCSAVG00000003919	-	97	57.576	ENSORLG00000017510	-	53	73.600	Oryzias_latipes
ENSCSAVG00000003919	-	87	53.514	ENSPTIG00000022093	-	72	63.014	Panthera_tigris_altaica
ENSCSAVG00000003919	-	96	55.446	ENSPMGG00000009036	-	73	74.359	Periophthalmus_magnuspinnatus
ENSCSAVG00000003919	-	67	72.263	ENSPNYG00000005058	-	53	73.600	Pundamilia_nyererei
ENSCSAVG00000003919	-	99	59.906	ENSSBOG00000019884	SRRM1	96	77.632	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003919	-	66	71.852	ENSSMAG00000009318	-	53	72.800	Scophthalmus_maximus