EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003922 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3601 bases
Position: chrreftig_1061:50164-53764
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006549	zf-C2H2	PF00096.26	1e-10	1	2
ENSCSAVP00000006549	zf-C2H2	PF00096.26	1e-10	2	2
ENSCSAVP00000006549	zf-met	PF12874.7	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006632	-	1163	-	ENSCSAVP00000006549	381 (aa)	-	H2YMJ7

Gene Model

Click here to download ENSCSAVG00000003922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003922	-	56	46.296	ENSCSAVG00000008862	-	99	46.296
ENSCSAVG00000003922	-	51	45.000	ENSCSAVG00000000293	-	100	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003922	-	97	70.305	ENSCING00000023622	-	78	70.305	Ciona_intestinalis
ENSCSAVG00000003922	-	60	46.725	ENSGMOG00000007617	znf367	72	43.629	Gadus_morhua
ENSCSAVG00000003922	-	68	42.636	ENSMUSG00000044934	Zfp367	51	61.314	Mus_musculus
ENSCSAVG00000003922	-	68	42.636	MGP_SPRETEiJ_G0019518	Zfp367	51	61.314	Mus_spretus