EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000003930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2995 bases
Position: chrreftig_220:57911-60905
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006563	TruB_N	PF01509.18	7.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006646	-	1368	-	ENSCSAVP00000006563	325 (aa)	-	H2YML1

Gene Model

Click here to download ENSCSAVG00000003930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003930	-	90	35.714	ENSG00000167112	TRUB2	87	35.714	Homo_sapiens
ENSCSAVG00000003930	-	58	36.364	ENSAPOG00000015733	trub2	67	36.364	Acanthochromis_polyacanthus
ENSCSAVG00000003930	-	91	35.117	ENSAMEG00000015395	TRUB2	89	35.117	Ailuropoda_melanoleuca
ENSCSAVG00000003930	-	90	32.770	ENSACIG00000016500	trub2	87	32.770	Amphilophus_citrinellus
ENSCSAVG00000003930	-	90	33.784	ENSAOCG00000002330	trub2	84	33.784	Amphiprion_ocellaris
ENSCSAVG00000003930	-	89	33.677	ENSAPEG00000013177	trub2	84	33.677	Amphiprion_percula
ENSCSAVG00000003930	-	90	33.444	ENSATEG00000011371	trub2	93	33.444	Anabas_testudineus
ENSCSAVG00000003930	-	85	33.808	ENSAPLG00000009254	TRUB2	90	34.043	Anas_platyrhynchos
ENSCSAVG00000003930	-	87	37.544	ENSACAG00000007331	TRUB2	85	37.544	Anolis_carolinensis
ENSCSAVG00000003930	-	90	34.130	ENSANAG00000036234	TRUB2	93	34.130	Aotus_nancymaae
ENSCSAVG00000003930	-	89	33.677	ENSACLG00000010793	trub2	87	33.677	Astatotilapia_calliptera
ENSCSAVG00000003930	-	89	35.959	ENSAMXG00000031679	trub2	82	35.959	Astyanax_mexicanus
ENSCSAVG00000003930	-	90	34.812	ENSCJAG00000020009	TRUB2	87	34.812	Callithrix_jacchus
ENSCSAVG00000003930	-	91	33.333	ENSCAFG00000020068	TRUB2	89	33.333	Canis_familiaris
ENSCSAVG00000003930	-	54	36.364	ENSCAFG00020017325	-	97	36.364	Canis_lupus_dingo
ENSCSAVG00000003930	-	90	32.765	ENSCHIG00000021160	TRUB2	87	32.765	Capra_hircus
ENSCSAVG00000003930	-	86	34.043	ENSTSYG00000034163	TRUB2	83	34.043	Carlito_syrichta
ENSCSAVG00000003930	-	78	34.252	ENSCAPG00000000223	TRUB2	83	36.090	Cavia_aperea
ENSCSAVG00000003930	-	90	35.034	ENSCPOG00000013535	TRUB2	87	36.994	Cavia_porcellus
ENSCSAVG00000003930	-	90	34.812	ENSCCAG00000026531	-	88	34.812	Cebus_capucinus
ENSCSAVG00000003930	-	90	33.677	ENSCCAG00000028463	-	87	33.677	Cebus_capucinus
ENSCSAVG00000003930	-	90	35.374	ENSCATG00000038234	TRUB2	87	35.374	Cercocebus_atys
ENSCSAVG00000003930	-	90	34.471	ENSCLAG00000001702	TRUB2	87	36.628	Chinchilla_lanigera
ENSCSAVG00000003930	-	90	35.593	ENSCSAG00000014117	TRUB2	87	35.593	Chlorocebus_sabaeus
ENSCSAVG00000003930	-	90	33.562	ENSCHOG00000001555	TRUB2	87	33.562	Choloepus_hoffmanni
ENSCSAVG00000003930	-	80	38.931	ENSCPBG00000025186	TRUB2	76	38.931	Chrysemys_picta_bellii
ENSCSAVG00000003930	-	90	32.993	ENSCANG00000016135	TRUB2	86	32.993	Colobus_angolensis_palliatus
ENSCSAVG00000003930	-	90	32.082	ENSCGRG00001024441	Trub2	91	33.140	Cricetulus_griseus_chok1gshd
ENSCSAVG00000003930	-	90	32.082	ENSCGRG00000005633	Trub2	87	32.082	Cricetulus_griseus_crigri
ENSCSAVG00000003930	-	95	35.987	ENSCSEG00000001331	trub2	91	35.987	Cynoglossus_semilaevis
ENSCSAVG00000003930	-	89	32.302	ENSCVAG00000009901	trub2	86	32.302	Cyprinodon_variegatus
ENSCSAVG00000003930	-	89	36.271	ENSDARG00000028379	trub2	82	36.271	Danio_rerio
ENSCSAVG00000003930	-	90	34.130	ENSDNOG00000045679	-	87	34.130	Dasypus_novemcinctus
ENSCSAVG00000003930	-	90	33.106	ENSDORG00000016222	Trub2	91	33.106	Dipodomys_ordii
ENSCSAVG00000003930	-	93	32.143	FBgn0033060	CG7849	95	32.143	Drosophila_melanogaster
ENSCSAVG00000003930	-	90	32.993	ENSETEG00000009114	TRUB2	89	32.993	Echinops_telfairi
ENSCSAVG00000003930	-	92	33.667	ENSEASG00005016819	TRUB2	89	33.667	Equus_asinus_asinus
ENSCSAVG00000003930	-	92	33.000	ENSECAG00000023520	TRUB2	89	33.000	Equus_caballus
ENSCSAVG00000003930	-	90	32.765	ENSEEUG00000008908	TRUB2	88	32.765	Erinaceus_europaeus
ENSCSAVG00000003930	-	88	31.683	ENSELUG00000002376	trub2	93	31.683	Esox_lucius
ENSCSAVG00000003930	-	91	34.899	ENSFCAG00000005839	TRUB2	91	34.899	Felis_catus
ENSCSAVG00000003930	-	74	36.364	ENSFALG00000001364	TRUB2	76	36.364	Ficedula_albicollis
ENSCSAVG00000003930	-	88	36.207	ENSFDAG00000021374	TRUB2	89	37.288	Fukomys_damarensis
ENSCSAVG00000003930	-	84	31.985	ENSGMOG00000000981	trub2	90	31.985	Gadus_morhua
ENSCSAVG00000003930	-	95	34.494	ENSGALG00000004920	TRUB2	77	34.494	Gallus_gallus
ENSCSAVG00000003930	-	81	34.586	ENSGAFG00000010107	trub2	79	34.586	Gambusia_affinis
ENSCSAVG00000003930	-	89	31.959	ENSGACG00000001476	trub2	86	31.959	Gasterosteus_aculeatus
ENSCSAVG00000003930	-	86	38.214	ENSGAGG00000022872	TRUB2	82	38.214	Gopherus_agassizii
ENSCSAVG00000003930	-	90	35.374	ENSGGOG00000014780	TRUB2	87	35.374	Gorilla_gorilla
ENSCSAVG00000003930	-	89	33.333	ENSHBUG00000022384	trub2	87	33.333	Haplochromis_burtoni
ENSCSAVG00000003930	-	90	34.130	ENSHGLG00000016715	TRUB2	87	34.130	Heterocephalus_glaber_female
ENSCSAVG00000003930	-	90	34.130	ENSHGLG00100016548	TRUB2	87	34.130	Heterocephalus_glaber_male
ENSCSAVG00000003930	-	94	33.987	ENSHCOG00000017748	trub2	90	33.987	Hippocampus_comes
ENSCSAVG00000003930	-	89	37.543	ENSIPUG00000017725	hdhd3	50	37.543	Ictalurus_punctatus
ENSCSAVG00000003930	-	80	34.615	ENSSTOG00000022617	-	79	34.615	Ictidomys_tridecemlineatus
ENSCSAVG00000003930	-	80	34.231	ENSSTOG00000008024	-	87	34.503	Ictidomys_tridecemlineatus
ENSCSAVG00000003930	-	90	30.375	ENSJJAG00000019181	Trub2	86	30.375	Jaculus_jaculus
ENSCSAVG00000003930	-	90	32.673	ENSKMAG00000007861	trub2	89	32.673	Kryptolebias_marmoratus
ENSCSAVG00000003930	-	79	36.015	ENSLBEG00000000907	trub2	76	36.015	Labrus_bergylta
ENSCSAVG00000003930	-	90	38.567	ENSLACG00000001515	TRUB2	85	38.567	Latimeria_chalumnae
ENSCSAVG00000003930	-	81	39.245	ENSLOCG00000000885	trub2	86	39.245	Lepisosteus_oculatus
ENSCSAVG00000003930	-	90	33.333	ENSLAFG00000002174	TRUB2	95	33.333	Loxodonta_africana
ENSCSAVG00000003930	-	90	35.374	ENSMFAG00000000881	TRUB2	87	35.374	Macaca_fascicularis
ENSCSAVG00000003930	-	90	35.374	ENSMMUG00000014146	TRUB2	87	35.374	Macaca_mulatta
ENSCSAVG00000003930	-	90	35.374	ENSMNEG00000011189	TRUB2	87	35.374	Macaca_nemestrina
ENSCSAVG00000003930	-	90	35.374	ENSMLEG00000037270	TRUB2	87	35.374	Mandrillus_leucophaeus
ENSCSAVG00000003930	-	92	34.437	ENSMAMG00000023643	trub2	96	34.437	Mastacembelus_armatus
ENSCSAVG00000003930	-	89	33.677	ENSMZEG00005016018	trub2	87	33.677	Maylandia_zebra
ENSCSAVG00000003930	-	58	36.898	ENSMGAG00000003894	TRUB2	92	36.898	Meleagris_gallopavo
ENSCSAVG00000003930	-	90	32.423	ENSMAUG00000010403	Trub2	87	33.140	Mesocricetus_auratus
ENSCSAVG00000003930	-	90	35.495	ENSMICG00000047032	TRUB2	87	35.495	Microcebus_murinus
ENSCSAVG00000003930	-	90	31.741	ENSMOCG00000014291	Trub2	95	31.741	Microtus_ochrogaster
ENSCSAVG00000003930	-	92	32.781	ENSMMOG00000021674	trub2	90	32.781	Mola_mola
ENSCSAVG00000003930	-	92	33.887	ENSMODG00000005940	TRUB2	99	33.887	Monodelphis_domestica
ENSCSAVG00000003930	-	90	33.110	ENSMALG00000021231	trub2	86	33.110	Monopterus_albus
ENSCSAVG00000003930	-	90	32.765	MGP_CAROLIEiJ_G0023368	Trub2	87	33.140	Mus_caroli
ENSCSAVG00000003930	-	90	33.220	ENSMUSG00000039826	Trub2	87	33.908	Mus_musculus
ENSCSAVG00000003930	-	92	32.673	MGP_PahariEiJ_G0024826	Trub2	87	34.483	Mus_pahari
ENSCSAVG00000003930	-	90	32.881	MGP_SPRETEiJ_G0024286	Trub2	87	33.908	Mus_spretus
ENSCSAVG00000003930	-	81	33.835	ENSMPUG00000013206	TRUB2	72	33.835	Mustela_putorius_furo
ENSCSAVG00000003930	-	90	33.447	ENSMLUG00000005256	TRUB2	87	33.447	Myotis_lucifugus
ENSCSAVG00000003930	-	90	31.741	ENSNGAG00000018679	Trub2	87	32.961	Nannospalax_galili
ENSCSAVG00000003930	-	89	33.677	ENSNBRG00000016294	trub2	87	33.677	Neolamprologus_brichardi
ENSCSAVG00000003930	-	90	35.374	ENSNLEG00000017556	TRUB2	87	35.374	Nomascus_leucogenys
ENSCSAVG00000003930	-	90	34.014	ENSMEUG00000000484	TRUB2	93	34.014	Notamacropus_eugenii
ENSCSAVG00000003930	-	90	35.836	ENSODEG00000017292	TRUB2	89	35.836	Octodon_degus
ENSCSAVG00000003930	-	89	33.677	ENSONIG00000004230	trub2	87	33.677	Oreochromis_niloticus
ENSCSAVG00000003930	-	56	35.676	ENSOANG00000029023	-	81	35.676	Ornithorhynchus_anatinus
ENSCSAVG00000003930	-	90	32.423	ENSOCUG00000026296	TRUB2	79	32.423	Oryctolagus_cuniculus
ENSCSAVG00000003930	-	87	32.746	ENSORLG00000020011	trub2	84	32.746	Oryzias_latipes
ENSCSAVG00000003930	-	86	32.857	ENSORLG00020011028	trub2	81	33.571	Oryzias_latipes_hni
ENSCSAVG00000003930	-	87	33.099	ENSORLG00015007494	trub2	86	33.099	Oryzias_latipes_hsok
ENSCSAVG00000003930	-	87	33.217	ENSOMEG00000006702	trub2	85	33.217	Oryzias_melastigma
ENSCSAVG00000003930	-	58	34.211	ENSOARG00000003785	-	86	32.432	Ovis_aries
ENSCSAVG00000003930	-	90	33.106	ENSOARG00000010579	-	87	33.106	Ovis_aries
ENSCSAVG00000003930	-	90	35.374	ENSPPAG00000043146	TRUB2	87	35.374	Pan_paniscus
ENSCSAVG00000003930	-	91	34.899	ENSPPRG00000006307	TRUB2	91	34.899	Panthera_pardus
ENSCSAVG00000003930	-	91	34.564	ENSPTIG00000012366	TRUB2	91	34.564	Panthera_tigris_altaica
ENSCSAVG00000003930	-	90	35.714	ENSPTRG00000021423	TRUB2	87	35.714	Pan_troglodytes
ENSCSAVG00000003930	-	90	35.714	ENSPTRG00000052151	-	87	35.714	Pan_troglodytes
ENSCSAVG00000003930	-	90	35.374	ENSPANG00000025856	TRUB2	87	35.374	Papio_anubis
ENSCSAVG00000003930	-	81	37.828	ENSPKIG00000019769	trub2	86	37.828	Paramormyrops_kingsleyae
ENSCSAVG00000003930	-	87	36.620	ENSPSIG00000015701	TRUB2	93	36.620	Pelodiscus_sinensis
ENSCSAVG00000003930	-	89	32.765	ENSPMGG00000010206	trub2	90	32.765	Periophthalmus_magnuspinnatus
ENSCSAVG00000003930	-	90	33.559	ENSPEMG00000017893	Trub2	91	35.057	Peromyscus_maniculatus_bairdii
ENSCSAVG00000003930	-	90	35.154	ENSPCIG00000026731	TRUB2	93	35.154	Phascolarctos_cinereus
ENSCSAVG00000003930	-	79	35.135	ENSPFOG00000018018	trub2	68	35.135	Poecilia_formosa
ENSCSAVG00000003930	-	79	34.749	ENSPLAG00000010484	trub2	73	34.749	Poecilia_latipinna
ENSCSAVG00000003930	-	81	35.338	ENSPMEG00000012913	trub2	78	35.338	Poecilia_mexicana
ENSCSAVG00000003930	-	81	34.586	ENSPREG00000002549	trub2	78	34.586	Poecilia_reticulata
ENSCSAVG00000003930	-	90	35.374	ENSPPYG00000019650	TRUB2	88	35.374	Pongo_abelii
ENSCSAVG00000003930	-	90	33.898	ENSPCAG00000015068	TRUB2	89	33.898	Procavia_capensis
ENSCSAVG00000003930	-	90	34.812	ENSPCOG00000017100	TRUB2	87	34.812	Propithecus_coquereli
ENSCSAVG00000003930	-	84	32.246	ENSPVAG00000001224	TRUB2	91	32.246	Pteropus_vampyrus
ENSCSAVG00000003930	-	89	33.677	ENSPNYG00000013666	trub2	87	33.677	Pundamilia_nyererei
ENSCSAVG00000003930	-	89	34.932	ENSPNAG00000017292	trub2	82	34.932	Pygocentrus_nattereri
ENSCSAVG00000003930	-	90	31.186	ENSRNOG00000043189	Trub2	89	31.186	Rattus_norvegicus
ENSCSAVG00000003930	-	90	32.313	ENSRBIG00000006965	TRUB2	86	32.313	Rhinopithecus_bieti
ENSCSAVG00000003930	-	90	35.034	ENSRROG00000042928	TRUB2	87	35.034	Rhinopithecus_roxellana
ENSCSAVG00000003930	-	90	34.130	ENSSBOG00000022439	TRUB2	87	34.130	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003930	-	81	36.090	ENSSFOG00015013391	trub2	84	36.090	Scleropages_formosus
ENSCSAVG00000003930	-	83	36.029	ENSSMAG00000020820	trub2	81	36.029	Scophthalmus_maximus
ENSCSAVG00000003930	-	90	33.673	ENSSDUG00000016928	trub2	86	34.014	Seriola_dumerili
ENSCSAVG00000003930	-	90	33.333	ENSSLDG00000024701	trub2	86	33.333	Seriola_lalandi_dorsalis
ENSCSAVG00000003930	-	93	34.754	ENSSPUG00000015515	TRUB2	90	34.754	Sphenodon_punctatus
ENSCSAVG00000003930	-	81	36.466	ENSSPAG00000017865	trub2	80	36.466	Stegastes_partitus
ENSCSAVG00000003930	-	90	32.765	ENSSSCG00000005645	TRUB2	84	33.465	Sus_scrofa
ENSCSAVG00000003930	-	68	38.288	ENSTGUG00000003704	TRUB2	84	38.288	Taeniopygia_guttata
ENSCSAVG00000003930	-	86	31.930	ENSTRUG00000015499	trub2	85	31.930	Takifugu_rubripes
ENSCSAVG00000003930	-	86	31.338	ENSTNIG00000014721	trub2	96	31.338	Tetraodon_nigroviridis
ENSCSAVG00000003930	-	59	34.197	ENSTBEG00000000586	TRUB2	84	34.197	Tupaia_belangeri
ENSCSAVG00000003930	-	80	34.351	ENSTTRG00000016486	TRUB2	78	34.351	Tursiops_truncatus
ENSCSAVG00000003930	-	91	34.564	ENSUAMG00000020276	TRUB2	86	34.564	Ursus_americanus
ENSCSAVG00000003930	-	91	34.564	ENSUMAG00000022051	TRUB2	86	34.564	Ursus_maritimus
ENSCSAVG00000003930	-	92	33.225	ENSVVUG00000013451	TRUB2	86	33.225	Vulpes_vulpes
ENSCSAVG00000003930	-	89	34.589	ENSXETG00000003973	trub2	88	34.589	Xenopus_tropicalis
ENSCSAVG00000003930	-	89	32.877	ENSXCOG00000008759	trub2	85	32.877	Xiphophorus_couchianus
ENSCSAVG00000003930	-	89	32.877	ENSXMAG00000015478	trub2	85	32.877	Xiphophorus_maculatus