EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000003938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 934 bases
Position: chrreftig_220:93849-94782
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006573	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006656	-	320	-	ENSCSAVP00000006573	104 (aa)	-	H2YMM1

Gene Model

Click here to download ENSCSAVG00000003938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000003938	-	88	31.250	ENSCSAVG00000008336	-	51	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000003938	-	85	79.545	ENSG00000101246	ARFRP1	73	79.545	Homo_sapiens
ENSCSAVG00000003938	-	85	79.545	ENSANAG00000036343	ARFRP1	73	79.545	Aotus_nancymaae
ENSCSAVG00000003938	-	85	79.545	ENSCJAG00000010382	ARFRP1	73	79.545	Callithrix_jacchus
ENSCSAVG00000003938	-	85	79.545	ENSTSYG00000033120	ARFRP1	73	79.545	Carlito_syrichta
ENSCSAVG00000003938	-	85	79.545	ENSCCAG00000022484	ARFRP1	73	79.545	Cebus_capucinus
ENSCSAVG00000003938	-	85	79.545	ENSCATG00000039104	ARFRP1	73	79.545	Cercocebus_atys
ENSCSAVG00000003938	-	85	79.545	ENSECAG00000019636	ARFRP1	59	79.545	Equus_caballus
ENSCSAVG00000003938	-	85	79.545	ENSFCAG00000044777	ARFRP1	72	79.545	Felis_catus
ENSCSAVG00000003938	-	85	79.545	ENSGGOG00000004799	ARFRP1	73	79.545	Gorilla_gorilla
ENSCSAVG00000003938	-	85	79.545	ENSHBUG00000006541	arfrp1	62	79.545	Haplochromis_burtoni
ENSCSAVG00000003938	-	85	79.545	ENSLACG00000001971	ARFRP1	75	79.545	Latimeria_chalumnae
ENSCSAVG00000003938	-	85	79.545	ENSMFAG00000001321	ARFRP1	73	79.545	Macaca_fascicularis
ENSCSAVG00000003938	-	85	79.545	ENSMMUG00000000169	ARFRP1	73	79.545	Macaca_mulatta
ENSCSAVG00000003938	-	85	79.545	ENSMNEG00000036325	ARFRP1	73	79.545	Macaca_nemestrina
ENSCSAVG00000003938	-	85	79.545	ENSMLEG00000034228	ARFRP1	73	79.545	Mandrillus_leucophaeus
ENSCSAVG00000003938	-	85	79.545	ENSMICG00000008840	ARFRP1	72	79.545	Microcebus_murinus
ENSCSAVG00000003938	-	85	79.545	MGP_CAROLIEiJ_G0024805	Arfrp1	73	79.545	Mus_caroli
ENSCSAVG00000003938	-	85	79.545	ENSMUSG00000038671	Arfrp1	73	79.545	Mus_musculus
ENSCSAVG00000003938	-	85	79.545	MGP_PahariEiJ_G0026253	Arfrp1	73	79.545	Mus_pahari
ENSCSAVG00000003938	-	85	79.545	MGP_SPRETEiJ_G0025731	Arfrp1	73	79.545	Mus_spretus
ENSCSAVG00000003938	-	85	79.545	ENSNLEG00000010131	ARFRP1	73	79.545	Nomascus_leucogenys
ENSCSAVG00000003938	-	85	79.545	ENSPPAG00000023993	ARFRP1	73	79.545	Pan_paniscus
ENSCSAVG00000003938	-	85	79.545	ENSPPRG00000024309	ARFRP1	72	79.545	Panthera_pardus
ENSCSAVG00000003938	-	85	79.545	ENSPTIG00000021097	ARFRP1	72	79.545	Panthera_tigris_altaica
ENSCSAVG00000003938	-	85	79.545	ENSPTRG00000013747	ARFRP1	73	79.545	Pan_troglodytes
ENSCSAVG00000003938	-	85	79.545	ENSPANG00000025599	ARFRP1	73	79.545	Papio_anubis
ENSCSAVG00000003938	-	85	79.545	ENSPCOG00000024163	ARFRP1	73	79.545	Propithecus_coquereli
ENSCSAVG00000003938	-	85	79.545	ENSRBIG00000044065	ARFRP1	73	79.545	Rhinopithecus_bieti
ENSCSAVG00000003938	-	85	79.545	ENSRROG00000010121	ARFRP1	73	79.545	Rhinopithecus_roxellana
ENSCSAVG00000003938	-	85	78.409	ENSSBOG00000021962	ARFRP1	73	78.409	Saimiri_boliviensis_boliviensis
ENSCSAVG00000003938	-	85	80.682	ENSTNIG00000005278	arfrp1	73	80.682	Tetraodon_nigroviridis