EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000003985 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
15260 bases
Position
chrreftig_51:1277320-1292579
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000006648tRNA_SADPF07973.146.4e-1211
ENSCSAVP00000006653tRNA_SADPF07973.147.3e-1211
ENSCSAVP00000006651tRNA_SADPF07973.147.5e-1211
ENSCSAVP00000006654tRNA_SADPF07973.147.9e-1211
ENSCSAVP00000006645tRNA_SADPF07973.147.9e-1211
ENSCSAVP00000006652tRNA_SADPF07973.147.9e-1211
ENSCSAVP00000006647tRNA_SADPF07973.148e-1211
ENSCSAVP00000006649tRNA_SADPF07973.148e-1211
ENSCSAVP00000006650tRNA_SADPF07973.148e-1211
ENSCSAVP00000006648HGTP_anticodonPF03129.202.8e-1511
ENSCSAVP00000006650HGTP_anticodonPF03129.203.3e-1511
ENSCSAVP00000006645HGTP_anticodonPF03129.203.4e-1511
ENSCSAVP00000006649HGTP_anticodonPF03129.203.4e-1511
ENSCSAVP00000006647HGTP_anticodonPF03129.203.6e-1511
ENSCSAVP00000006652HGTP_anticodonPF03129.201.3e-1211
ENSCSAVP00000006654HGTP_anticodonPF03129.202.7e-1211
ENSCSAVP00000006646tRNA-synt_2bPF00587.254.1e-3811
ENSCSAVP00000006653tRNA-synt_2bPF00587.251.2e-3711
ENSCSAVP00000006651tRNA-synt_2bPF00587.251.2e-3711
ENSCSAVP00000006645tRNA-synt_2bPF00587.251.2e-3711
ENSCSAVP00000006650tRNA-synt_2bPF00587.251.3e-3711
ENSCSAVP00000006649tRNA-synt_2bPF00587.251.3e-3711
ENSCSAVP00000006647tRNA-synt_2bPF00587.251.4e-3711
ENSCSAVP00000006648tRNA-synt_2bPF00587.253.8e-3711
ENSCSAVP00000006654tRNA-synt_2bPF00587.256.4e-3411
ENSCSAVP00000006652tRNA-synt_2bPF00587.251.2e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000006738-2121-ENSCSAVP00000006652707 (aa)-H2YMV0
ENSCSAVT00000006739-2196-ENSCSAVP00000006653650 (aa)-H2YMV1
ENSCSAVT00000006731-2356-ENSCSAVP00000006645692 (aa)-H2YMU3
ENSCSAVT00000006732-1708-ENSCSAVP00000006646402 (aa)-H2YMU4
ENSCSAVT00000006733-2411-ENSCSAVP00000006647717 (aa)-H2YMU5
ENSCSAVT00000006734-2044-ENSCSAVP00000006648595 (aa)-H2YMU6
ENSCSAVT00000006735-2253-ENSCSAVP00000006649697 (aa)-H2YMU7
ENSCSAVT00000006736-2270-ENSCSAVP00000006650689 (aa)-H2YMU8
ENSCSAVT00000006737-2193-ENSCSAVP00000006651658 (aa)-H2YMU9
ENSCSAVT00000006740-2112-ENSCSAVP00000006654704 (aa)-H2YMV2
Gene Model
Click here to download ENSCSAVG00000003985's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000003985's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000003985-9763.806WBGene00006617tars-19762.334Caenorhabditis_elegans
ENSCSAVG00000003985-9771.987FBgn0027081ThrRS9867.965Drosophila_melanogaster
ENSCSAVG00000003985-9461.640YIL078WTHS19353.857Saccharomyces_cerevisiae

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