EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004094 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1311 bases
Position: chrreftig_116:355290-356600
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000006865	ResIII	PF04851.15	2.2e-07	1	1
ENSCSAVP00000006865	DEAD	PF00270.29	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000006952	-	1311	-	ENSCSAVP00000006865	437 (aa)	-	H2YNF8

Gene Model

Click here to download ENSCSAVG00000004094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004094	-	96	37.412	ENSCSAVG00000007521	-	69	37.412
ENSCSAVG00000004094	-	99	34.023	ENSCSAVG00000011052	-	71	34.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004094	-	99	54.167	ENSG00000108469	RECQL5	96	54.386	Homo_sapiens
ENSCSAVG00000004094	-	99	53.935	ENSANAG00000026587	RECQL5	91	54.135	Aotus_nancymaae
ENSCSAVG00000004094	-	97	42.316	WBGene00004322	rcq-5	55	42.316	Caenorhabditis_elegans
ENSCSAVG00000004094	-	99	53.472	ENSCJAG00000014183	RECQL5	91	53.885	Callithrix_jacchus
ENSCSAVG00000004094	-	99	53.596	ENSTSYG00000031875	RECQL5	90	54.020	Carlito_syrichta
ENSCSAVG00000004094	-	99	54.167	ENSCCAG00000031546	RECQL5	91	54.135	Cebus_capucinus
ENSCSAVG00000004094	-	99	53.704	ENSCATG00000029763	RECQL5	90	54.135	Cercocebus_atys
ENSCSAVG00000004094	-	99	54.167	ENSCANG00000038821	RECQL5	90	54.386	Colobus_angolensis_palliatus
ENSCSAVG00000004094	-	84	56.522	ENSDNOG00000012832	-	96	56.522	Dasypus_novemcinctus
ENSCSAVG00000004094	-	99	47.018	FBgn0027375	RecQ5	92	47.018	Drosophila_melanogaster
ENSCSAVG00000004094	-	91	49.377	ENSETEG00000010420	-	54	49.377	Echinops_telfairi
ENSCSAVG00000004094	-	92	51.861	ENSEBUG00000011061	recql5	81	51.861	Eptatretus_burgeri
ENSCSAVG00000004094	-	98	55.607	ENSFCAG00000005751	RECQL5	86	55.528	Felis_catus
ENSCSAVG00000004094	-	99	54.398	ENSGGOG00000009481	RECQL5	90	54.386	Gorilla_gorilla
ENSCSAVG00000004094	-	99	53.580	ENSHBUG00000020297	recql5	52	53.811	Haplochromis_burtoni
ENSCSAVG00000004094	-	94	51.834	ENSLBEG00000019135	recql5	94	51.834	Labrus_bergylta
ENSCSAVG00000004094	-	99	54.524	ENSLAFG00000008491	RECQL5	51	54.292	Loxodonta_africana
ENSCSAVG00000004094	-	99	54.167	ENSMFAG00000044550	RECQL5	90	54.386	Macaca_fascicularis
ENSCSAVG00000004094	-	99	54.167	ENSMNEG00000040154	RECQL5	90	54.386	Macaca_nemestrina
ENSCSAVG00000004094	-	99	54.167	ENSMLEG00000033070	RECQL5	90	54.386	Mandrillus_leucophaeus
ENSCSAVG00000004094	-	99	53.132	MGP_CAROLIEiJ_G0017420	Recql5	94	52.340	Mus_caroli
ENSCSAVG00000004094	-	99	52.900	ENSMUSG00000020752	Recql5	92	54.425	Mus_musculus
ENSCSAVG00000004094	-	99	52.204	MGP_PahariEiJ_G0018550	Recql5	92	53.982	Mus_pahari
ENSCSAVG00000004094	-	99	52.900	MGP_SPRETEiJ_G0018265	Recql5	92	54.425	Mus_spretus
ENSCSAVG00000004094	-	99	54.398	ENSNLEG00000001129	RECQL5	90	54.386	Nomascus_leucogenys
ENSCSAVG00000004094	-	91	53.769	ENSOANG00000015844	-	95	53.769	Ornithorhynchus_anatinus
ENSCSAVG00000004094	-	99	54.167	ENSPPAG00000034423	RECQL5	90	54.386	Pan_paniscus
ENSCSAVG00000004094	-	98	55.607	ENSPPRG00000004541	RECQL5	92	50.000	Panthera_pardus
ENSCSAVG00000004094	-	98	55.841	ENSPTIG00000020601	RECQL5	92	55.779	Panthera_tigris_altaica
ENSCSAVG00000004094	-	99	54.167	ENSPTRG00000009651	RECQL5	90	54.386	Pan_troglodytes
ENSCSAVG00000004094	-	99	53.935	ENSPANG00000020139	RECQL5	90	54.135	Papio_anubis
ENSCSAVG00000004094	-	91	54.637	ENSPSIG00000005110	-	96	54.637	Pelodiscus_sinensis
ENSCSAVG00000004094	-	97	53.613	ENSPMAG00000004572	recql5	70	53.613	Petromyzon_marinus
ENSCSAVG00000004094	-	99	54.167	ENSRBIG00000008500	RECQL5	90	54.386	Rhinopithecus_bieti
ENSCSAVG00000004094	-	99	54.167	ENSRROG00000043301	RECQL5	90	54.386	Rhinopithecus_roxellana
ENSCSAVG00000004094	-	99	53.364	ENSSBOG00000033729	RECQL5	90	53.518	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004094	-	99	54.524	ENSSPUG00000008872	RECQL5	92	54.545	Sphenodon_punctatus
ENSCSAVG00000004094	-	99	51.044	ENSTRUG00000008246	recql5	50	50.575	Takifugu_rubripes
ENSCSAVG00000004094	-	99	54.292	ENSUAMG00000002850	RECQL5	83	53.586	Ursus_americanus