EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004191 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 12260 bases
Position: chrreftig_326:259769-272028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007015	GUCT	PF08152.12	9.7e-26	1	1
ENSCSAVP00000007015	DEAD	PF00270.29	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007105	-	2230	-	ENSCSAVP00000007015	505 (aa)	-	H2YNV7

Gene Model

Click here to download ENSCSAVG00000004191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004191	-	55	33.444	ENSCSAVG00000004158	-	60	33.444
ENSCSAVG00000004191	-	59	31.667	ENSCSAVG00000011566	-	65	31.667
ENSCSAVG00000004191	-	59	32.131	ENSCSAVG00000000630	-	91	30.537
ENSCSAVG00000004191	-	54	33.333	ENSCSAVG00000000522	-	65	33.333
ENSCSAVG00000004191	-	55	35.211	ENSCSAVG00000002353	-	68	35.507
ENSCSAVG00000004191	-	56	30.818	ENSCSAVG00000004227	-	60	30.818
ENSCSAVG00000004191	-	60	33.117	ENSCSAVG00000006949	-	62	33.117
ENSCSAVG00000004191	-	58	33.445	ENSCSAVG00000009920	-	77	33.445
ENSCSAVG00000004191	-	56	32.867	ENSCSAVG00000002180	-	73	32.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004191	-	98	51.389	ENSCSAG00000007762	-	55	52.532	Chlorocebus_sabaeus
ENSCSAVG00000004191	-	100	80.792	ENSCING00000003502	-	75	80.594	Ciona_intestinalis
ENSCSAVG00000004191	-	99	40.116	ENSXETG00000008836	ddx21	66	40.119	Xenopus_tropicalis