EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3750 bases
Position: chrreftig_48:150595-154344
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007074	ResIII	PF04851.15	5.1e-11	1	1
ENSCSAVP00000007074	DEAD	PF00270.29	1.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007165	-	1572	-	ENSCSAVP00000007074	519 (aa)	-	H2YP16

Gene Model

Click here to download ENSCSAVG00000004227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004227	-	92	32.033	ENSCSAVG00000003375	-	80	31.211
ENSCSAVG00000004227	-	63	32.641	ENSCSAVG00000006949	-	61	32.641
ENSCSAVG00000004227	-	60	30.818	ENSCSAVG00000004191	-	56	30.818
ENSCSAVG00000004227	-	92	34.656	ENSCSAVG00000004895	-	79	34.656
ENSCSAVG00000004227	-	69	32.514	ENSCSAVG00000004304	-	52	32.240
ENSCSAVG00000004227	-	86	35.811	ENSCSAVG00000003023	-	83	33.017
ENSCSAVG00000004227	-	65	30.055	ENSCSAVG00000004158	-	67	30.055
ENSCSAVG00000004227	-	71	34.959	ENSCSAVG00000011566	-	73	34.959
ENSCSAVG00000004227	-	50	30.075	ENSCSAVG00000000630	-	76	33.508
ENSCSAVG00000004227	-	71	30.189	ENSCSAVG00000002353	-	71	30.645
ENSCSAVG00000004227	-	71	32.162	ENSCSAVG00000008916	-	95	31.818
ENSCSAVG00000004227	-	75	31.726	ENSCSAVG00000000522	-	84	31.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004227	-	100	45.537	ENSG00000125485	DDX31	73	45.537	Homo_sapiens
ENSCSAVG00000004227	-	98	44.208	ENSAPOG00000004212	ddx31	71	44.208	Acanthochromis_polyacanthus
ENSCSAVG00000004227	-	99	43.682	ENSAMEG00000004120	DDX31	75	43.682	Ailuropoda_melanoleuca
ENSCSAVG00000004227	-	91	45.380	ENSACIG00000006033	ddx31	79	45.697	Amphilophus_citrinellus
ENSCSAVG00000004227	-	61	46.855	ENSAOCG00000023183	ddx31	60	46.855	Amphiprion_ocellaris
ENSCSAVG00000004227	-	92	46.217	ENSATEG00000015522	ddx31	64	46.217	Anabas_testudineus
ENSCSAVG00000004227	-	97	45.180	ENSAPLG00000016396	DDX31	76	45.180	Anas_platyrhynchos
ENSCSAVG00000004227	-	92	46.906	ENSANAG00000035120	DDX31	69	46.906	Aotus_nancymaae
ENSCSAVG00000004227	-	92	45.842	ENSACLG00000008720	ddx31	81	44.742	Astatotilapia_calliptera
ENSCSAVG00000004227	-	92	41.897	ENSAMXG00000009673	ddx31	73	41.897	Astyanax_mexicanus
ENSCSAVG00000004227	-	94	45.294	ENSBTAG00000003530	DDX31	72	45.294	Bos_taurus
ENSCSAVG00000004227	-	92	46.707	ENSCJAG00000018173	DDX31	74	46.707	Callithrix_jacchus
ENSCSAVG00000004227	-	100	45.009	ENSCAFG00020024548	DDX31	80	45.009	Canis_lupus_dingo
ENSCSAVG00000004227	-	94	45.686	ENSCHIG00000020011	DDX31	69	45.686	Capra_hircus
ENSCSAVG00000004227	-	94	44.618	ENSTSYG00000009182	DDX31	69	44.618	Carlito_syrichta
ENSCSAVG00000004227	-	92	43.713	ENSCAPG00000015227	DDX31	69	43.713	Cavia_aperea
ENSCSAVG00000004227	-	92	45.509	ENSCPOG00000014243	DDX31	68	45.509	Cavia_porcellus
ENSCSAVG00000004227	-	92	46.906	ENSCCAG00000025989	DDX31	67	46.906	Cebus_capucinus
ENSCSAVG00000004227	-	100	43.542	ENSCATG00000038462	DDX31	72	43.542	Cercocebus_atys
ENSCSAVG00000004227	-	96	45.106	ENSCLAG00000008431	DDX31	75	45.106	Chinchilla_lanigera
ENSCSAVG00000004227	-	100	44.991	ENSCSAG00000014953	DDX31	73	44.991	Chlorocebus_sabaeus
ENSCSAVG00000004227	-	100	41.530	ENSCHOG00000001526	DDX31	76	41.530	Choloepus_hoffmanni
ENSCSAVG00000004227	-	99	44.444	ENSCPBG00000021215	DDX31	95	44.444	Chrysemys_picta_bellii
ENSCSAVG00000004227	-	99	75.619	ENSCING00000009272	-	84	75.619	Ciona_intestinalis
ENSCSAVG00000004227	-	100	44.708	ENSCANG00000036241	DDX31	72	44.708	Colobus_angolensis_palliatus
ENSCSAVG00000004227	-	96	45.261	ENSCGRG00001014191	Ddx31	72	45.261	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004227	-	96	45.261	ENSCGRG00000008396	Ddx31	72	45.261	Cricetulus_griseus_crigri
ENSCSAVG00000004227	-	92	45.194	ENSCSEG00000008541	ddx31	65	46.421	Cynoglossus_semilaevis
ENSCSAVG00000004227	-	92	44.742	ENSCVAG00000000189	ddx31	78	45.062	Cyprinodon_variegatus
ENSCSAVG00000004227	-	92	43.813	ENSDARG00000035507	ddx31	70	42.447	Danio_rerio
ENSCSAVG00000004227	-	98	44.382	ENSDNOG00000009865	DDX31	73	44.382	Dasypus_novemcinctus
ENSCSAVG00000004227	-	93	46.429	ENSDORG00000005071	Ddx31	73	46.429	Dipodomys_ordii
ENSCSAVG00000004227	-	92	38.050	FBgn0027602	CG8611	57	36.929	Drosophila_melanogaster
ENSCSAVG00000004227	-	93	40.237	ENSETEG00000007908	DDX31	66	40.237	Echinops_telfairi
ENSCSAVG00000004227	-	77	37.412	ENSEBUG00000014723	-	91	37.412	Eptatretus_burgeri
ENSCSAVG00000004227	-	100	44.809	ENSEASG00005009845	DDX31	74	44.809	Equus_asinus_asinus
ENSCSAVG00000004227	-	93	45.562	ENSECAG00000005146	DDX31	69	45.562	Equus_caballus
ENSCSAVG00000004227	-	100	44.909	ENSEEUG00000012785	DDX31	73	44.909	Erinaceus_europaeus
ENSCSAVG00000004227	-	92	45.306	ENSELUG00000001052	ddx31	66	45.306	Esox_lucius
ENSCSAVG00000004227	-	99	42.287	ENSFCAG00000007106	DDX31	77	42.287	Felis_catus
ENSCSAVG00000004227	-	97	45.936	ENSFALG00000001468	DDX31	75	45.936	Ficedula_albicollis
ENSCSAVG00000004227	-	94	45.349	ENSFDAG00000007853	DDX31	74	45.349	Fukomys_damarensis
ENSCSAVG00000004227	-	92	45.565	ENSFHEG00000009047	ddx31	66	46.169	Fundulus_heteroclitus
ENSCSAVG00000004227	-	53	43.478	ENSGMOG00000007128	-	100	43.478	Gadus_morhua
ENSCSAVG00000004227	-	77	47.857	ENSGALG00000041473	DDX31	84	47.857	Gallus_gallus
ENSCSAVG00000004227	-	92	43.265	ENSGAFG00000009888	ddx31	68	43.265	Gambusia_affinis
ENSCSAVG00000004227	-	53	44.803	ENSGACG00000002278	-	100	44.803	Gasterosteus_aculeatus
ENSCSAVG00000004227	-	96	46.463	ENSGAGG00000012482	DDX31	71	46.463	Gopherus_agassizii
ENSCSAVG00000004227	-	100	44.991	ENSGGOG00000008314	DDX31	73	42.259	Gorilla_gorilla
ENSCSAVG00000004227	-	92	45.639	ENSHBUG00000019539	ddx31	57	45.639	Haplochromis_burtoni
ENSCSAVG00000004227	-	93	45.776	ENSHGLG00000013194	DDX31	75	44.421	Heterocephalus_glaber_female
ENSCSAVG00000004227	-	88	44.421	ENSHGLG00100016868	DDX31	78	44.421	Heterocephalus_glaber_male
ENSCSAVG00000004227	-	94	44.668	ENSHCOG00000020998	ddx31	72	44.668	Hippocampus_comes
ENSCSAVG00000004227	-	92	46.356	ENSIPUG00000020592	ddx31	68	46.356	Ictalurus_punctatus
ENSCSAVG00000004227	-	97	41.199	ENSSTOG00000007985	DDX31	77	41.199	Ictidomys_tridecemlineatus
ENSCSAVG00000004227	-	94	44.643	ENSJJAG00000018491	Ddx31	72	44.643	Jaculus_jaculus
ENSCSAVG00000004227	-	91	46.708	ENSKMAG00000006165	ddx31	90	46.598	Kryptolebias_marmoratus
ENSCSAVG00000004227	-	92	46.154	ENSLBEG00000008550	ddx31	65	46.154	Labrus_bergylta
ENSCSAVG00000004227	-	73	45.137	ENSLACG00000008136	DDX31	73	44.888	Latimeria_chalumnae
ENSCSAVG00000004227	-	91	44.578	ENSLOCG00000005630	ddx31	67	44.578	Lepisosteus_oculatus
ENSCSAVG00000004227	-	100	44.444	ENSLAFG00000015379	DDX31	79	44.444	Loxodonta_africana
ENSCSAVG00000004227	-	92	46.906	ENSMFAG00000036342	DDX31	59	46.906	Macaca_fascicularis
ENSCSAVG00000004227	-	100	44.809	ENSMMUG00000004590	DDX31	73	44.809	Macaca_mulatta
ENSCSAVG00000004227	-	100	44.627	ENSMNEG00000045539	DDX31	74	46.707	Macaca_nemestrina
ENSCSAVG00000004227	-	92	47.106	ENSMLEG00000032393	DDX31	59	47.106	Mandrillus_leucophaeus
ENSCSAVG00000004227	-	92	46.012	ENSMAMG00000019252	ddx31	70	46.012	Mastacembelus_armatus
ENSCSAVG00000004227	-	91	44.742	ENSMZEG00005020937	ddx31	82	44.742	Maylandia_zebra
ENSCSAVG00000004227	-	98	45.047	ENSMGAG00000006002	DDX31	74	45.047	Meleagris_gallopavo
ENSCSAVG00000004227	-	94	45.168	ENSMAUG00000016824	Ddx31	80	45.168	Mesocricetus_auratus
ENSCSAVG00000004227	-	100	44.444	ENSMICG00000010581	DDX31	74	44.444	Microcebus_murinus
ENSCSAVG00000004227	-	96	45.261	ENSMOCG00000020938	Ddx31	74	45.261	Microtus_ochrogaster
ENSCSAVG00000004227	-	94	43.662	ENSMMOG00000020996	ddx31	89	43.662	Mola_mola
ENSCSAVG00000004227	-	97	44.906	ENSMODG00000012555	DDX31	72	44.906	Monodelphis_domestica
ENSCSAVG00000004227	-	92	45.344	ENSMALG00000002614	ddx31	66	45.344	Monopterus_albus
ENSCSAVG00000004227	-	96	45.648	MGP_CAROLIEiJ_G0023360	Ddx31	74	45.648	Mus_caroli
ENSCSAVG00000004227	-	96	45.455	ENSMUSG00000026806	Ddx31	74	45.455	Mus_musculus
ENSCSAVG00000004227	-	94	46.337	MGP_PahariEiJ_G0024817	Ddx31	73	46.337	Mus_pahari
ENSCSAVG00000004227	-	96	45.455	MGP_SPRETEiJ_G0024277	Ddx31	74	45.455	Mus_spretus
ENSCSAVG00000004227	-	100	44.123	ENSMPUG00000012522	DDX31	64	44.123	Mustela_putorius_furo
ENSCSAVG00000004227	-	91	43.787	ENSMLUG00000011507	DDX31	68	43.787	Myotis_lucifugus
ENSCSAVG00000004227	-	93	46.154	ENSNGAG00000020928	Ddx31	73	46.154	Nannospalax_galili
ENSCSAVG00000004227	-	92	45.732	ENSNBRG00000024320	ddx31	81	45.732	Neolamprologus_brichardi
ENSCSAVG00000004227	-	100	44.809	ENSNLEG00000012870	DDX31	64	44.809	Nomascus_leucogenys
ENSCSAVG00000004227	-	92	42.600	ENSMEUG00000008760	DDX31	69	42.600	Notamacropus_eugenii
ENSCSAVG00000004227	-	69	56.571	ENSOPRG00000004477	-	58	56.571	Ochotona_princeps
ENSCSAVG00000004227	-	92	41.434	ENSODEG00000015685	DDX31	73	41.434	Octodon_degus
ENSCSAVG00000004227	-	92	45.842	ENSONIG00000000711	ddx31	72	45.842	Oreochromis_niloticus
ENSCSAVG00000004227	-	92	47.431	ENSOANG00000005047	DDX31	79	47.431	Ornithorhynchus_anatinus
ENSCSAVG00000004227	-	94	46.275	ENSOCUG00000008739	DDX31	75	46.275	Oryctolagus_cuniculus
ENSCSAVG00000004227	-	100	43.843	ENSORLG00000016628	ddx31	65	46.232	Oryzias_latipes
ENSCSAVG00000004227	-	100	43.421	ENSORLG00020017897	ddx31	65	46.232	Oryzias_latipes_hni
ENSCSAVG00000004227	-	92	46.421	ENSOMEG00000004600	ddx31	60	46.421	Oryzias_melastigma
ENSCSAVG00000004227	-	95	45.367	ENSOGAG00000004072	DDX31	80	45.367	Otolemur_garnettii
ENSCSAVG00000004227	-	94	45.686	ENSOARG00000005879	DDX31	72	45.686	Ovis_aries
ENSCSAVG00000004227	-	100	45.173	ENSPPAG00000027761	DDX31	73	42.441	Pan_paniscus
ENSCSAVG00000004227	-	100	45.173	ENSPTRG00000021500	DDX31	73	42.441	Pan_troglodytes
ENSCSAVG00000004227	-	92	46.707	ENSPANG00000025987	DDX31	59	46.707	Papio_anubis
ENSCSAVG00000004227	-	93	48.438	ENSPSIG00000006722	DDX31	71	47.566	Pelodiscus_sinensis
ENSCSAVG00000004227	-	92	43.532	ENSPMGG00000020721	ddx31	73	43.532	Periophthalmus_magnuspinnatus
ENSCSAVG00000004227	-	97	45.106	ENSPEMG00000014798	Ddx31	75	45.106	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004227	-	92	45.709	ENSPCIG00000019742	DDX31	71	46.108	Phascolarctos_cinereus
ENSCSAVG00000004227	-	92	44.650	ENSPFOG00000000144	ddx31	67	44.650	Poecilia_formosa
ENSCSAVG00000004227	-	65	45.536	ENSPLAG00000019817	ddx31	65	45.536	Poecilia_latipinna
ENSCSAVG00000004227	-	92	44.650	ENSPMEG00000018263	ddx31	67	44.650	Poecilia_mexicana
ENSCSAVG00000004227	-	92	43.878	ENSPREG00000002870	-	67	43.878	Poecilia_reticulata
ENSCSAVG00000004227	-	100	44.991	ENSPPYG00000019713	DDX31	64	44.991	Pongo_abelii
ENSCSAVG00000004227	-	87	42.616	ENSPCAG00000004249	DDX31	56	42.616	Procavia_capensis
ENSCSAVG00000004227	-	100	42.987	ENSPCOG00000010431	DDX31	66	42.987	Propithecus_coquereli
ENSCSAVG00000004227	-	100	44.708	ENSPVAG00000002050	DDX31	67	44.708	Pteropus_vampyrus
ENSCSAVG00000004227	-	91	44.583	ENSPNYG00000013810	ddx31	80	44.583	Pundamilia_nyererei
ENSCSAVG00000004227	-	92	46.263	ENSPNAG00000022187	ddx31	68	46.356	Pygocentrus_nattereri
ENSCSAVG00000004227	-	98	45.524	ENSRNOG00000013040	Ddx31	75	45.524	Rattus_norvegicus
ENSCSAVG00000004227	-	100	42.987	ENSRBIG00000042353	DDX31	64	42.987	Rhinopithecus_bieti
ENSCSAVG00000004227	-	92	46.707	ENSRROG00000044427	DDX31	76	45.119	Rhinopithecus_roxellana
ENSCSAVG00000004227	-	94	36.412	YKR024C	-	74	36.412	Saccharomyces_cerevisiae
ENSCSAVG00000004227	-	92	46.906	ENSSBOG00000021668	DDX31	67	46.906	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004227	-	92	46.139	ENSSHAG00000018804	DDX31	72	44.693	Sarcophilus_harrisii
ENSCSAVG00000004227	-	97	45.507	ENSSFOG00015012974	ddx31	69	45.507	Scleropages_formosus
ENSCSAVG00000004227	-	92	43.902	ENSSMAG00000017673	ddx31	61	43.902	Scophthalmus_maximus
ENSCSAVG00000004227	-	92	44.130	ENSSDUG00000011751	ddx31	91	43.640	Seriola_dumerili
ENSCSAVG00000004227	-	75	44.192	ENSSLDG00000005425	-	80	44.531	Seriola_lalandi_dorsalis
ENSCSAVG00000004227	-	96	47.338	ENSSPUG00000016144	DDX31	77	47.338	Sphenodon_punctatus
ENSCSAVG00000004227	-	61	45.283	ENSSPAG00000018034	ddx31	63	45.283	Stegastes_partitus
ENSCSAVG00000004227	-	94	45.793	ENSSSCG00000005729	DDX31	69	44.423	Sus_scrofa
ENSCSAVG00000004227	-	96	45.076	ENSTGUG00000005142	DDX31	82	45.076	Taeniopygia_guttata
ENSCSAVG00000004227	-	92	41.856	ENSTRUG00000013699	ddx31	87	42.893	Takifugu_rubripes
ENSCSAVG00000004227	-	99	42.803	ENSTNIG00000006039	ddx31	83	42.803	Tetraodon_nigroviridis
ENSCSAVG00000004227	-	83	41.814	ENSTBEG00000013672	DDX31	75	41.814	Tupaia_belangeri
ENSCSAVG00000004227	-	92	46.000	ENSTTRG00000014093	DDX31	60	46.000	Tursiops_truncatus
ENSCSAVG00000004227	-	100	41.155	ENSUAMG00000024811	DDX31	74	41.155	Ursus_americanus
ENSCSAVG00000004227	-	100	41.155	ENSUMAG00000016669	DDX31	78	45.743	Ursus_maritimus
ENSCSAVG00000004227	-	97	45.817	ENSVVUG00000028399	DDX31	77	45.817	Vulpes_vulpes
ENSCSAVG00000004227	-	91	45.791	ENSXETG00000006258	ddx31	79	45.791	Xenopus_tropicalis
ENSCSAVG00000004227	-	92	37.448	ENSXCOG00000018753	ddx31	88	37.448	Xiphophorus_couchianus
ENSCSAVG00000004227	-	92	44.239	ENSXMAG00000006678	ddx31	71	44.239	Xiphophorus_maculatus