EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5137 bases
Position: chrreftig_99:177238-182374
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007079	RRM_1	PF00076.22	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007170	-	1063	-	ENSCSAVP00000007079	275 (aa)	-	H2YP21

Gene Model

Click here to download ENSCSAVG00000004231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004231	-	84	37.168	ENSG00000204356	NELFE	53	48.529	Homo_sapiens
ENSCSAVG00000004231	-	75	42.045	ENSACAG00000011678	NELFE	56	42.045	Anolis_carolinensis
ENSCSAVG00000004231	-	67	48.529	ENSBTAG00000007453	NELFE	54	43.210	Bos_taurus
ENSCSAVG00000004231	-	73	42.857	ENSCHIG00000013713	NELFE	50	48.529	Capra_hircus
ENSCSAVG00000004231	-	99	70.863	ENSCING00000005779	-	90	70.863	Ciona_intestinalis
ENSCSAVG00000004231	-	67	48.529	ENSCGRG00001016608	Nelfe	50	48.529	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004231	-	67	48.529	ENSCGRG00000014034	Nelfe	50	48.529	Cricetulus_griseus_crigri
ENSCSAVG00000004231	-	86	36.614	ENSEBUG00000017070	nelfe	85	36.614	Eptatretus_burgeri
ENSCSAVG00000004231	-	67	48.529	ENSEASG00005015538	NELFE	50	48.529	Equus_asinus_asinus
ENSCSAVG00000004231	-	67	49.254	ENSFDAG00000011589	NELFE	51	49.254	Fukomys_damarensis
ENSCSAVG00000004231	-	86	33.333	ENSGALG00000045676	NELFE	81	34.118	Gallus_gallus
ENSCSAVG00000004231	-	86	32.130	ENSGAGG00000005411	NELFE	85	32.491	Gopherus_agassizii
ENSCSAVG00000004231	-	75	41.573	ENSJJAG00000014005	Nelfe	56	41.573	Jaculus_jaculus
ENSCSAVG00000004231	-	86	30.851	ENSLAFG00000028155	NELFE	86	31.560	Loxodonta_africana
ENSCSAVG00000004231	-	67	48.529	ENSMAUG00000016812	Nelfe	50	48.529	Mesocricetus_auratus
ENSCSAVG00000004231	-	86	31.022	ENSMODG00000015063	NELFE	84	33.577	Monodelphis_domestica
ENSCSAVG00000004231	-	67	48.529	ENSMUSG00000024369	Nelfe	50	48.529	Mus_musculus
ENSCSAVG00000004231	-	67	48.529	MGP_PahariEiJ_G0020473	Nelfe	50	48.529	Mus_pahari
ENSCSAVG00000004231	-	86	30.104	ENSONIG00000013513	nelfe	84	30.450	Oreochromis_niloticus
ENSCSAVG00000004231	-	71	46.835	ENSPEMG00000015423	Nelfe	51	46.835	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004231	-	67	48.529	ENSRNOG00000000420	Nelfe	50	48.529	Rattus_norvegicus
ENSCSAVG00000004231	-	67	47.059	ENSSARG00000003684	NELFE	52	47.059	Sorex_araneus
ENSCSAVG00000004231	-	81	39.316	ENSSPUG00000012971	NELFE	86	31.741	Sphenodon_punctatus