EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004321 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1800 bases
Position: chrreftig_1:789147-790946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007225	Methyltransf_31	PF13847.6	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007319	-	842	-	ENSCSAVP00000007225	222 (aa)	-	H2YPG7

Gene Model

Click here to download ENSCSAVG00000004321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004321	-	78	80.925	ENSCSAVG00000007262	-	94	80.925
ENSCSAVG00000004321	-	65	33.108	ENSCSAVG00000004347	-	67	33.108
ENSCSAVG00000004321	-	95	59.524	ENSCSAVG00000005814	-	100	59.524
ENSCSAVG00000004321	-	96	60.094	ENSCSAVG00000011293	-	96	60.094
ENSCSAVG00000004321	-	99	59.361	ENSCSAVG00000011296	-	99	59.361
ENSCSAVG00000004321	-	96	60.094	ENSCSAVG00000011294	-	96	60.094
ENSCSAVG00000004321	-	74	33.136	ENSCSAVG00000003331	-	67	33.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004321	-	67	30.667	ENSCING00000013626	-	63	30.667	Ciona_intestinalis
ENSCSAVG00000004321	-	95	54.717	ENSCING00000021159	-	96	54.717	Ciona_intestinalis
ENSCSAVG00000004321	-	63	30.000	ENSCING00000003740	-	69	30.000	Ciona_intestinalis