EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1593 bases
Position: chrreftig_0:220595-222187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007227	NOC3p	PF07540.11	3.3e-25	1	1
ENSCSAVP00000007227	CBF	PF03914.17	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007321	-	1593	-	ENSCSAVP00000007227	531 (aa)	-	H2YPG9

Gene Model

Click here to download ENSCSAVG00000004323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004323	-	98	43.797	ENSG00000173145	NOC3L	64	43.925	Homo_sapiens
ENSCSAVG00000004323	-	98	43.233	ENSAMEG00000013594	NOC3L	64	43.364	Ailuropoda_melanoleuca
ENSCSAVG00000004323	-	97	37.667	ENSACIG00000022699	noc3l	65	38.815	Amphilophus_citrinellus
ENSCSAVG00000004323	-	97	41.843	ENSAOCG00000016388	noc3l	66	40.230	Amphiprion_ocellaris
ENSCSAVG00000004323	-	97	42.035	ENSAPEG00000008785	noc3l	67	41.731	Amphiprion_percula
ENSCSAVG00000004323	-	97	41.154	ENSATEG00000015162	noc3l	66	40.115	Anabas_testudineus
ENSCSAVG00000004323	-	99	43.258	ENSAPLG00000012432	NOC3L	64	43.203	Anas_platyrhynchos
ENSCSAVG00000004323	-	99	41.852	ENSACAG00000007551	NOC3L	65	41.805	Anolis_carolinensis
ENSCSAVG00000004323	-	98	43.609	ENSANAG00000032361	NOC3L	64	43.738	Aotus_nancymaae
ENSCSAVG00000004323	-	97	41.618	ENSACLG00000015493	noc3l	68	41.618	Astatotilapia_calliptera
ENSCSAVG00000004323	-	85	41.313	ENSAMXG00000004967	noc3l	64	42.060	Astyanax_mexicanus
ENSCSAVG00000004323	-	98	43.797	ENSBTAG00000011368	NOC3L	70	43.925	Bos_taurus
ENSCSAVG00000004323	-	98	31.776	WBGene00016508	C37H5.5	66	31.579	Caenorhabditis_elegans
ENSCSAVG00000004323	-	98	43.421	ENSCJAG00000015753	NOC3L	64	43.551	Callithrix_jacchus
ENSCSAVG00000004323	-	98	43.797	ENSCAFG00000008033	NOC3L	64	43.925	Canis_familiaris
ENSCSAVG00000004323	-	98	43.797	ENSCAFG00020004781	NOC3L	64	43.925	Canis_lupus_dingo
ENSCSAVG00000004323	-	98	43.797	ENSCHIG00000023968	NOC3L	64	43.925	Capra_hircus
ENSCSAVG00000004323	-	98	41.353	ENSTSYG00000005953	NOC3L	62	41.495	Carlito_syrichta
ENSCSAVG00000004323	-	89	42.412	ENSCAPG00000008220	NOC3L	64	42.292	Cavia_aperea
ENSCSAVG00000004323	-	99	43.043	ENSCPOG00000009746	NOC3L	64	43.173	Cavia_porcellus
ENSCSAVG00000004323	-	99	42.937	ENSCCAG00000021365	NOC3L	70	43.551	Cebus_capucinus
ENSCSAVG00000004323	-	98	43.797	ENSCATG00000035635	NOC3L	64	43.925	Cercocebus_atys
ENSCSAVG00000004323	-	98	43.233	ENSCLAG00000002911	NOC3L	64	43.364	Chinchilla_lanigera
ENSCSAVG00000004323	-	95	43.689	ENSCSAG00000006207	NOC3L	64	44.112	Chlorocebus_sabaeus
ENSCSAVG00000004323	-	99	42.301	ENSCPBG00000026538	NOC3L	65	42.620	Chrysemys_picta_bellii
ENSCSAVG00000004323	-	98	76.108	ENSCING00000013996	-	88	76.108	Ciona_intestinalis
ENSCSAVG00000004323	-	98	43.797	ENSCANG00000032546	NOC3L	63	43.925	Colobus_angolensis_palliatus
ENSCSAVG00000004323	-	96	38.356	ENSCGRG00001015486	-	73	38.023	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004323	-	99	42.751	ENSCGRG00001009730	-	64	43.178	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004323	-	99	42.751	ENSCGRG00000006291	Noc3l	64	43.178	Cricetulus_griseus_crigri
ENSCSAVG00000004323	-	96	38.356	ENSCGRG00000013159	-	67	37.833	Cricetulus_griseus_crigri
ENSCSAVG00000004323	-	97	40.577	ENSCSEG00000001257	noc3l	66	40.377	Cynoglossus_semilaevis
ENSCSAVG00000004323	-	83	36.444	ENSCVAG00000000764	noc3l	51	45.902	Cyprinodon_variegatus
ENSCSAVG00000004323	-	98	40.720	ENSDARG00000002487	noc3l	64	40.417	Danio_rerio
ENSCSAVG00000004323	-	99	43.123	ENSDNOG00000016992	NOC3L	64	43.253	Dasypus_novemcinctus
ENSCSAVG00000004323	-	98	43.797	ENSDORG00000011806	Noc3l	64	43.925	Dipodomys_ordii
ENSCSAVG00000004323	-	98	32.955	FBgn0037489	CG1234	61	32.386	Drosophila_melanogaster
ENSCSAVG00000004323	-	99	36.900	ENSEBUG00000008654	noc3l	68	36.127	Eptatretus_burgeri
ENSCSAVG00000004323	-	98	43.233	ENSEASG00005011488	NOC3L	66	43.364	Equus_asinus_asinus
ENSCSAVG00000004323	-	98	43.233	ENSECAG00000021720	NOC3L	64	43.364	Equus_caballus
ENSCSAVG00000004323	-	99	40.189	ENSELUG00000004023	noc3l	65	40.189	Esox_lucius
ENSCSAVG00000004323	-	98	43.985	ENSFCAG00000006261	NOC3L	64	44.112	Felis_catus
ENSCSAVG00000004323	-	99	41.959	ENSFALG00000007807	NOC3L	65	41.912	Ficedula_albicollis
ENSCSAVG00000004323	-	98	43.715	ENSFDAG00000009386	NOC3L	63	43.843	Fukomys_damarensis
ENSCSAVG00000004323	-	96	38.803	ENSFHEG00000003448	noc3l	66	38.803	Fundulus_heteroclitus
ENSCSAVG00000004323	-	97	40.462	ENSGMOG00000007458	noc3l	68	40.462	Gadus_morhua
ENSCSAVG00000004323	-	99	43.446	ENSGALG00000035667	NOC3L	61	43.389	Gallus_gallus
ENSCSAVG00000004323	-	95	39.726	ENSGAFG00000001525	noc3l	68	39.726	Gambusia_affinis
ENSCSAVG00000004323	-	97	40.192	ENSGACG00000010335	noc3l	65	39.777	Gasterosteus_aculeatus
ENSCSAVG00000004323	-	99	41.558	ENSGAGG00000020146	NOC3L	65	41.697	Gopherus_agassizii
ENSCSAVG00000004323	-	98	37.879	ENSGGOG00000014038	NOC3L	67	38.041	Gorilla_gorilla
ENSCSAVG00000004323	-	97	37.958	ENSHBUG00000019428	noc3l	66	37.958	Haplochromis_burtoni
ENSCSAVG00000004323	-	98	41.121	ENSHGLG00000013197	NOC3L	63	41.264	Heterocephalus_glaber_female
ENSCSAVG00000004323	-	98	41.121	ENSHGLG00100002424	NOC3L	62	41.264	Heterocephalus_glaber_male
ENSCSAVG00000004323	-	98	40.377	ENSHCOG00000004797	noc3l	64	39.658	Hippocampus_comes
ENSCSAVG00000004323	-	98	41.255	ENSIPUG00000011208	noc3l	71	41.255	Ictalurus_punctatus
ENSCSAVG00000004323	-	98	44.173	ENSSTOG00000027599	NOC3L	64	44.238	Ictidomys_tridecemlineatus
ENSCSAVG00000004323	-	98	43.421	ENSJJAG00000018611	Noc3l	64	43.551	Jaculus_jaculus
ENSCSAVG00000004323	-	96	39.341	ENSKMAG00000015270	noc3l	62	38.835	Kryptolebias_marmoratus
ENSCSAVG00000004323	-	97	39.884	ENSLBEG00000020287	noc3l	64	39.692	Labrus_bergylta
ENSCSAVG00000004323	-	99	43.071	ENSLACG00000017685	NOC3L	64	43.071	Latimeria_chalumnae
ENSCSAVG00000004323	-	99	40.490	ENSLOCG00000005949	noc3l	64	40.525	Lepisosteus_oculatus
ENSCSAVG00000004323	-	98	43.633	ENSLAFG00000001715	NOC3L	64	43.762	Loxodonta_africana
ENSCSAVG00000004323	-	98	43.797	ENSMFAG00000032429	NOC3L	64	43.925	Macaca_fascicularis
ENSCSAVG00000004323	-	98	43.609	ENSMMUG00000001619	NOC3L	64	43.738	Macaca_mulatta
ENSCSAVG00000004323	-	98	43.797	ENSMNEG00000027484	NOC3L	64	43.738	Macaca_nemestrina
ENSCSAVG00000004323	-	98	43.797	ENSMLEG00000028319	NOC3L	64	43.925	Mandrillus_leucophaeus
ENSCSAVG00000004323	-	97	41.426	ENSMAMG00000010850	noc3l	67	41.426	Mastacembelus_armatus
ENSCSAVG00000004323	-	97	41.618	ENSMZEG00005018478	noc3l	65	41.618	Maylandia_zebra
ENSCSAVG00000004323	-	99	43.097	ENSMGAG00000008676	NOC3L	64	43.414	Meleagris_gallopavo
ENSCSAVG00000004323	-	98	42.777	ENSMAUG00000021858	Noc3l	74	42.910	Mesocricetus_auratus
ENSCSAVG00000004323	-	99	42.937	ENSMICG00000005560	NOC3L	64	43.253	Microcebus_murinus
ENSCSAVG00000004323	-	99	43.094	ENSMOCG00000012818	Noc3l	65	43.199	Microtus_ochrogaster
ENSCSAVG00000004323	-	97	42.802	ENSMMOG00000009245	noc3l	65	42.500	Mola_mola
ENSCSAVG00000004323	-	99	42.385	ENSMODG00000005664	NOC3L	64	42.831	Monodelphis_domestica
ENSCSAVG00000004323	-	97	41.154	ENSMALG00000011772	noc3l	62	41.154	Monopterus_albus
ENSCSAVG00000004323	-	99	42.514	MGP_CAROLIEiJ_G0022928	Noc3l	64	42.831	Mus_caroli
ENSCSAVG00000004323	-	99	42.565	ENSMUSG00000024999	Noc3l	64	42.884	Mus_musculus
ENSCSAVG00000004323	-	99	42.565	MGP_PahariEiJ_G0014421	Noc3l	64	42.884	Mus_pahari
ENSCSAVG00000004323	-	99	42.379	MGP_SPRETEiJ_G0023846	Noc3l	64	42.699	Mus_spretus
ENSCSAVG00000004323	-	98	43.315	ENSMPUG00000017135	NOC3L	63	43.446	Mustela_putorius_furo
ENSCSAVG00000004323	-	99	41.978	ENSNGAG00000018086	Noc3l	64	41.978	Nannospalax_galili
ENSCSAVG00000004323	-	77	41.262	ENSNBRG00000024182	noc3l	57	41.262	Neolamprologus_brichardi
ENSCSAVG00000004323	-	98	42.243	ENSNLEG00000012959	NOC3L	63	42.135	Nomascus_leucogenys
ENSCSAVG00000004323	-	71	44.041	ENSMEUG00000010545	-	66	44.041	Notamacropus_eugenii
ENSCSAVG00000004323	-	93	38.400	ENSOPRG00000013292	NOC3L	60	38.569	Ochotona_princeps
ENSCSAVG00000004323	-	98	43.902	ENSODEG00000015822	NOC3L	63	44.030	Octodon_degus
ENSCSAVG00000004323	-	97	40.962	ENSONIG00000019138	noc3l	62	40.962	Oreochromis_niloticus
ENSCSAVG00000004323	-	66	42.737	ENSOANG00000004468	-	74	42.737	Ornithorhynchus_anatinus
ENSCSAVG00000004323	-	98	42.857	ENSOCUG00000013930	NOC3L	63	42.991	Oryctolagus_cuniculus
ENSCSAVG00000004323	-	99	39.963	ENSORLG00000019410	noc3l	64	39.963	Oryzias_latipes
ENSCSAVG00000004323	-	99	39.739	ENSORLG00020009199	noc3l	62	39.963	Oryzias_latipes_hni
ENSCSAVG00000004323	-	99	39.739	ENSORLG00015008623	noc3l	62	39.963	Oryzias_latipes_hsok
ENSCSAVG00000004323	-	98	39.850	ENSOMEG00000015213	noc3l	63	39.850	Oryzias_melastigma
ENSCSAVG00000004323	-	99	42.751	ENSOGAG00000009003	NOC3L	64	42.884	Otolemur_garnettii
ENSCSAVG00000004323	-	98	43.797	ENSOARG00000003978	NOC3L	64	43.925	Ovis_aries
ENSCSAVG00000004323	-	98	43.797	ENSPPAG00000043755	NOC3L	64	43.925	Pan_paniscus
ENSCSAVG00000004323	-	98	43.985	ENSPPRG00000006434	NOC3L	64	44.112	Panthera_pardus
ENSCSAVG00000004323	-	98	43.985	ENSPTIG00000019032	NOC3L	64	44.112	Panthera_tigris_altaica
ENSCSAVG00000004323	-	98	43.985	ENSPTRG00000002776	NOC3L	64	44.112	Pan_troglodytes
ENSCSAVG00000004323	-	98	43.609	ENSPANG00000021522	NOC3L	64	43.738	Papio_anubis
ENSCSAVG00000004323	-	96	40.192	ENSPKIG00000005812	noc3l	64	41.109	Paramormyrops_kingsleyae
ENSCSAVG00000004323	-	99	42.037	ENSPSIG00000004654	NOC3L	73	42.037	Pelodiscus_sinensis
ENSCSAVG00000004323	-	96	38.343	ENSPMGG00000003721	noc3l	65	38.343	Periophthalmus_magnuspinnatus
ENSCSAVG00000004323	-	99	39.777	ENSPEMG00000013021	Noc3l	64	39.926	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004323	-	99	42.357	ENSPCIG00000013354	NOC3L	64	42.647	Phascolarctos_cinereus
ENSCSAVG00000004323	-	95	39.922	ENSPFOG00000000761	noc3l	62	39.922	Poecilia_formosa
ENSCSAVG00000004323	-	95	40.117	ENSPLAG00000013702	noc3l	62	40.117	Poecilia_latipinna
ENSCSAVG00000004323	-	95	39.922	ENSPMEG00000007562	noc3l	62	39.922	Poecilia_mexicana
ENSCSAVG00000004323	-	96	39.535	ENSPREG00000001462	noc3l	62	39.922	Poecilia_reticulata
ENSCSAVG00000004323	-	98	43.609	ENSPPYG00000002500	NOC3L	64	43.738	Pongo_abelii
ENSCSAVG00000004323	-	94	40.945	ENSPCOG00000018871	NOC3L	64	41.176	Propithecus_coquereli
ENSCSAVG00000004323	-	98	42.105	ENSPVAG00000014290	NOC3L	63	41.935	Pteropus_vampyrus
ENSCSAVG00000004323	-	83	43.049	ENSPNYG00000017102	noc3l	54	47.692	Pundamilia_nyererei
ENSCSAVG00000004323	-	98	41.399	ENSPNAG00000012908	noc3l	66	41.021	Pygocentrus_nattereri
ENSCSAVG00000004323	-	99	42.193	ENSRNOG00000013965	Noc3l	64	42.514	Rattus_norvegicus
ENSCSAVG00000004323	-	98	43.797	ENSRBIG00000039925	NOC3L	63	43.925	Rhinopithecus_bieti
ENSCSAVG00000004323	-	98	43.797	ENSRROG00000028950	NOC3L	63	43.925	Rhinopithecus_roxellana
ENSCSAVG00000004323	-	98	43.421	ENSSBOG00000030095	NOC3L	64	43.551	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004323	-	99	41.621	ENSSHAG00000015050	NOC3L	65	41.912	Sarcophilus_harrisii
ENSCSAVG00000004323	-	96	41.313	ENSSFOG00015012840	noc3l	63	41.651	Scleropages_formosus
ENSCSAVG00000004323	-	97	40.270	ENSSMAG00000013795	noc3l	62	39.884	Scophthalmus_maximus
ENSCSAVG00000004323	-	97	41.040	ENSSDUG00000014905	noc3l	62	41.040	Seriola_dumerili
ENSCSAVG00000004323	-	97	36.000	ENSSLDG00000021439	noc3l	62	36.571	Seriola_lalandi_dorsalis
ENSCSAVG00000004323	-	98	43.264	ENSSPUG00000003210	NOC3L	67	43.396	Sphenodon_punctatus
ENSCSAVG00000004323	-	98	43.985	ENSSSCG00000010484	NOC3L	72	44.112	Sus_scrofa
ENSCSAVG00000004323	-	99	41.155	ENSTGUG00000008590	NOC3L	65	41.111	Taeniopygia_guttata
ENSCSAVG00000004323	-	55	39.661	ENSTRUG00000003582	noc3l	60	38.983	Takifugu_rubripes
ENSCSAVG00000004323	-	96	39.539	ENSTNIG00000018542	noc3l	63	39.423	Tetraodon_nigroviridis
ENSCSAVG00000004323	-	98	39.850	ENSTBEG00000009416	NOC3L	64	40.602	Tupaia_belangeri
ENSCSAVG00000004323	-	98	40.038	ENSTTRG00000013253	NOC3L	64	40.000	Tursiops_truncatus
ENSCSAVG00000004323	-	98	42.884	ENSUAMG00000009528	NOC3L	64	43.017	Ursus_americanus
ENSCSAVG00000004323	-	98	42.884	ENSUMAG00000004328	NOC3L	64	43.017	Ursus_maritimus
ENSCSAVG00000004323	-	98	43.797	ENSVPAG00000010113	NOC3L	64	43.925	Vicugna_pacos
ENSCSAVG00000004323	-	98	43.797	ENSVVUG00000022580	NOC3L	67	43.548	Vulpes_vulpes
ENSCSAVG00000004323	-	98	39.015	ENSXETG00000020975	noc3l	63	39.205	Xenopus_tropicalis
ENSCSAVG00000004323	-	82	39.041	ENSXCOG00000017874	noc3l	61	39.041	Xiphophorus_couchianus
ENSCSAVG00000004323	-	95	39.726	ENSXMAG00000015545	noc3l	62	39.726	Xiphophorus_maculatus