EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004347 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1692 bases
Position: chrreftig_13:644123-645814
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007283	Methyltransf_31	PF13847.6	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007377	-	758	-	ENSCSAVP00000007283	216 (aa)	-	H2YPM5

Gene Model

Click here to download ENSCSAVG00000004347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004347	-	67	33.108	ENSCSAVG00000004321	-	65	33.108
ENSCSAVG00000004347	-	75	30.303	ENSCSAVG00000005814	-	76	30.303
ENSCSAVG00000004347	-	75	30.303	ENSCSAVG00000011296	-	72	30.303
ENSCSAVG00000004347	-	67	38.255	ENSCSAVG00000003331	-	60	38.255
ENSCSAVG00000004347	-	64	31.159	ENSCSAVG00000006531	-	63	31.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004347	-	90	44.845	ENSCING00000009109	-	83	44.845	Ciona_intestinalis
ENSCSAVG00000004347	-	90	45.918	ENSCING00000013763	-	83	45.918	Ciona_intestinalis