EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 9286 bases
Position: chrreftig_99:276112-285397
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007309	RRM_1	PF00076.22	8.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007405	-	655	-	ENSCSAVP00000007309	180 (aa)	-	H2YPQ1

Gene Model

Click here to download ENSCSAVG00000004364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004364	-	57	60.784	ENSG00000152430	BOLL	71	61.972	Homo_sapiens
ENSCSAVG00000004364	-	61	38.393	ENSAPOG00000004922	dazl	54	38.393	Acanthochromis_polyacanthus
ENSCSAVG00000004364	-	56	39.604	ENSATEG00000001349	dazl	50	39.604	Anabas_testudineus
ENSCSAVG00000004364	-	64	52.586	ENSANAG00000031449	-	68	60.000	Aotus_nancymaae
ENSCSAVG00000004364	-	64	38.136	ENSACLG00000000529	dazl	57	38.136	Astatotilapia_calliptera
ENSCSAVG00000004364	-	67	55.000	ENSCJAG00000004092	BOLL	69	55.000	Callithrix_jacchus
ENSCSAVG00000004364	-	57	60.784	ENSCHIG00000024995	BOLL	53	50.000	Capra_hircus
ENSCSAVG00000004364	-	57	59.223	ENSTSYG00000014204	BOLL	65	55.833	Carlito_syrichta
ENSCSAVG00000004364	-	62	37.838	ENSCSEG00000014529	dazl	50	37.838	Cynoglossus_semilaevis
ENSCSAVG00000004364	-	64	35.606	ENSCVAG00000009591	dazl	65	34.848	Cyprinodon_variegatus
ENSCSAVG00000004364	-	55	42.424	ENSDARG00000036214	dazl	65	41.414	Danio_rerio
ENSCSAVG00000004364	-	66	37.288	ENSELUG00000006175	dazl	55	37.288	Esox_lucius
ENSCSAVG00000004364	-	66	40.678	ENSFHEG00000000634	dazl	52	39.831	Fundulus_heteroclitus
ENSCSAVG00000004364	-	53	40.625	ENSGMOG00000011491	dazl	96	40.625	Gadus_morhua
ENSCSAVG00000004364	-	57	60.784	ENSGGOG00000013594	BOLL	66	56.667	Gorilla_gorilla
ENSCSAVG00000004364	-	64	37.288	ENSHBUG00000017426	dazl	57	37.288	Haplochromis_burtoni
ENSCSAVG00000004364	-	63	38.261	ENSLBEG00000006023	dazl	57	38.261	Labrus_bergylta
ENSCSAVG00000004364	-	57	60.784	ENSMNEG00000033015	BOLL	65	56.667	Macaca_nemestrina
ENSCSAVG00000004364	-	64	38.136	ENSMZEG00005009515	dazl	57	38.136	Maylandia_zebra
ENSCSAVG00000004364	-	57	59.804	ENSMICG00000011845	BOLL	77	54.615	Microcebus_murinus
ENSCSAVG00000004364	-	66	37.288	ENSMALG00000021316	dazl	53	37.288	Monopterus_albus
ENSCSAVG00000004364	-	56	61.000	ENSMUSG00000025977	Boll	98	49.474	Mus_musculus
ENSCSAVG00000004364	-	56	61.000	MGP_PahariEiJ_G0027387	Boll	98	49.474	Mus_pahari
ENSCSAVG00000004364	-	53	63.542	ENSNGAG00000014596	-	97	50.725	Nannospalax_galili
ENSCSAVG00000004364	-	62	37.719	ENSNBRG00000005425	dazl	55	37.719	Neolamprologus_brichardi
ENSCSAVG00000004364	-	57	60.784	ENSNLEG00000006885	BOLL	66	56.667	Nomascus_leucogenys
ENSCSAVG00000004364	-	70	53.968	ENSOANG00000019928	-	76	53.968	Ornithorhynchus_anatinus
ENSCSAVG00000004364	-	57	60.784	ENSPPAG00000033757	BOLL	66	56.667	Pan_paniscus
ENSCSAVG00000004364	-	57	60.784	ENSPTRG00000012777	BOLL	66	56.667	Pan_troglodytes
ENSCSAVG00000004364	-	53	40.000	ENSPLAG00000021715	dazl	51	40.000	Poecilia_latipinna
ENSCSAVG00000004364	-	57	50.980	ENSPCOG00000002476	BOLL	93	51.064	Propithecus_coquereli
ENSCSAVG00000004364	-	64	38.136	ENSPNYG00000020484	dazl	57	38.136	Pundamilia_nyererei
ENSCSAVG00000004364	-	67	39.669	ENSSFOG00015014199	dazl	54	39.669	Scleropages_formosus
ENSCSAVG00000004364	-	64	38.983	ENSSMAG00000014694	dazl	52	38.983	Scophthalmus_maximus
ENSCSAVG00000004364	-	64	38.136	ENSSDUG00000005172	dazl	59	38.136	Seriola_dumerili
ENSCSAVG00000004364	-	64	38.136	ENSSLDG00000005485	dazl	59	38.136	Seriola_lalandi_dorsalis
ENSCSAVG00000004364	-	68	37.795	ENSTRUG00000015745	dazl	56	39.316	Takifugu_rubripes
ENSCSAVG00000004364	-	64	38.793	ENSTNIG00000001115	dazl	53	38.793	Tetraodon_nigroviridis
ENSCSAVG00000004364	-	57	39.216	ENSXMAG00000000965	dazl	51	39.216	Xiphophorus_maculatus