EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004438 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10756 bases
Position: chrreftig_131:426057-436812
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007420	tRNA_anti-codon	PF01336.25	2.2e-08	1	1
ENSCSAVP00000007421	tRNA-synt_2	PF00152.20	4.3e-60	1	1
ENSCSAVP00000007422	tRNA-synt_2	PF00152.20	4.1e-51	1	1
ENSCSAVP00000007423	tRNA-synt_2	PF00152.20	6.6e-42	1	1
ENSCSAVP00000007420	tRNA-synt_2	PF00152.20	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007519	-	1479	-	ENSCSAVP00000007422	246 (aa)	-	H2YQ14
ENSCSAVT00000007518	-	1213	-	ENSCSAVP00000007421	274 (aa)	-	H2YQ13
ENSCSAVT00000007517	-	833	-	ENSCSAVP00000007420	262 (aa)	-	H2YQ12
ENSCSAVT00000007520	-	891	-	ENSCSAVP00000007423	201 (aa)	-	H2YQ15

Gene Model

Click here to download ENSCSAVG00000004438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004438	-	67	32.836	ENSCSAVG00000010410	-	77	32.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004438	-	100	75.203	ENSG00000115866	DARS	100	62.791	Homo_sapiens
ENSCSAVG00000004438	-	61	34.058	ENSG00000137513	NARS2	78	36.986	Homo_sapiens
ENSCSAVG00000004438	-	93	30.112	ENSAPOG00000022947	nars2	54	30.112	Acanthochromis_polyacanthus
ENSCSAVG00000004438	-	100	75.203	ENSAPOG00000019177	dars	53	76.580	Acanthochromis_polyacanthus
ENSCSAVG00000004438	-	100	74.797	ENSAMEG00000005881	DARS	63	76.208	Ailuropoda_melanoleuca
ENSCSAVG00000004438	-	100	76.829	ENSACIG00000015293	dars	56	78.067	Amphilophus_citrinellus
ENSCSAVG00000004438	-	100	74.797	ENSAOCG00000002052	dars	51	76.208	Amphiprion_ocellaris
ENSCSAVG00000004438	-	93	30.483	ENSAOCG00000012259	nars2	54	30.483	Amphiprion_ocellaris
ENSCSAVG00000004438	-	100	75.203	ENSAPEG00000011547	dars	51	76.580	Amphiprion_percula
ENSCSAVG00000004438	-	100	76.016	ENSATEG00000002761	dars	51	77.323	Anabas_testudineus
ENSCSAVG00000004438	-	100	76.423	ENSAPLG00000001845	DARS	54	77.323	Anas_platyrhynchos
ENSCSAVG00000004438	-	100	75.203	ENSACAG00000000804	DARS	53	76.580	Anolis_carolinensis
ENSCSAVG00000004438	-	100	75.203	ENSANAG00000028134	DARS	54	76.580	Aotus_nancymaae
ENSCSAVG00000004438	-	100	76.016	ENSACLG00000021690	dars	51	77.695	Astatotilapia_calliptera
ENSCSAVG00000004438	-	85	73.099	ENSAMXG00000017796	dars	50	81.579	Astyanax_mexicanus
ENSCSAVG00000004438	-	100	75.610	ENSBTAG00000009949	DARS	54	76.952	Bos_taurus
ENSCSAVG00000004438	-	100	69.512	WBGene00001094	dars-1	51	70.632	Caenorhabditis_elegans
ENSCSAVG00000004438	-	100	75.203	ENSCJAG00000011967	DARS	54	76.580	Callithrix_jacchus
ENSCSAVG00000004438	-	100	75.610	ENSCAFG00000005161	DARS	54	76.952	Canis_familiaris
ENSCSAVG00000004438	-	100	75.610	ENSCAFG00020016165	DARS	54	76.952	Canis_lupus_dingo
ENSCSAVG00000004438	-	100	75.203	ENSCHIG00000011050	DARS	54	76.580	Capra_hircus
ENSCSAVG00000004438	-	100	75.203	ENSTSYG00000012049	DARS	54	76.580	Carlito_syrichta
ENSCSAVG00000004438	-	98	62.082	ENSCAPG00000003263	DARS	59	62.082	Cavia_aperea
ENSCSAVG00000004438	-	100	75.610	ENSCPOG00000004614	DARS	54	76.952	Cavia_porcellus
ENSCSAVG00000004438	-	100	75.203	ENSCCAG00000035686	DARS	54	76.580	Cebus_capucinus
ENSCSAVG00000004438	-	62	31.447	ENSCCAG00000022532	-	75	31.447	Cebus_capucinus
ENSCSAVG00000004438	-	100	75.203	ENSCATG00000038494	DARS	54	76.580	Cercocebus_atys
ENSCSAVG00000004438	-	100	76.016	ENSCLAG00000006355	DARS	54	77.323	Chinchilla_lanigera
ENSCSAVG00000004438	-	100	75.203	ENSCSAG00000016303	DARS	54	76.580	Chlorocebus_sabaeus
ENSCSAVG00000004438	-	99	67.172	ENSCHOG00000011449	DARS	51	63.598	Choloepus_hoffmanni
ENSCSAVG00000004438	-	100	75.203	ENSCPBG00000010133	DARS	54	76.208	Chrysemys_picta_bellii
ENSCSAVG00000004438	-	100	97.154	ENSCING00000003548	-	50	97.398	Ciona_intestinalis
ENSCSAVG00000004438	-	100	75.610	ENSCANG00000035502	DARS	54	76.952	Colobus_angolensis_palliatus
ENSCSAVG00000004438	-	100	75.610	ENSCGRG00001022990	Dars	54	76.952	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004438	-	100	66.802	ENSCGRG00000000741	-	54	68.519	Cricetulus_griseus_crigri
ENSCSAVG00000004438	-	100	75.610	ENSCGRG00000013315	-	54	76.952	Cricetulus_griseus_crigri
ENSCSAVG00000004438	-	100	75.610	ENSCSEG00000013966	dars	51	76.952	Cynoglossus_semilaevis
ENSCSAVG00000004438	-	100	75.610	ENSCVAG00000005713	dars	51	76.580	Cyprinodon_variegatus
ENSCSAVG00000004438	-	100	76.016	ENSDARG00000070043	dars	51	77.323	Danio_rerio
ENSCSAVG00000004438	-	100	76.016	ENSDORG00000013479	Dars	54	77.323	Dipodomys_ordii
ENSCSAVG00000004438	-	100	79.268	FBgn0002069	AspRS	51	79.926	Drosophila_melanogaster
ENSCSAVG00000004438	-	100	56.504	ENSETEG00000003309	-	86	57.993	Echinops_telfairi
ENSCSAVG00000004438	-	100	76.016	ENSEBUG00000005434	dars	51	77.323	Eptatretus_burgeri
ENSCSAVG00000004438	-	100	75.610	ENSEASG00005007349	DARS	54	76.952	Equus_asinus_asinus
ENSCSAVG00000004438	-	100	75.610	ENSECAG00000024197	DARS	54	76.952	Equus_caballus
ENSCSAVG00000004438	-	100	74.390	ENSELUG00000015137	dars	51	75.836	Esox_lucius
ENSCSAVG00000004438	-	100	75.610	ENSFCAG00000014295	DARS	54	76.952	Felis_catus
ENSCSAVG00000004438	-	100	77.236	ENSFALG00000013752	DARS	53	78.439	Ficedula_albicollis
ENSCSAVG00000004438	-	100	76.423	ENSFDAG00000006687	DARS	54	77.695	Fukomys_damarensis
ENSCSAVG00000004438	-	100	75.610	ENSFHEG00000011062	dars	51	76.580	Fundulus_heteroclitus
ENSCSAVG00000004438	-	100	76.016	ENSGMOG00000009591	dars	52	77.323	Gadus_morhua
ENSCSAVG00000004438	-	100	76.829	ENSGALG00000012355	DARS	57	77.695	Gallus_gallus
ENSCSAVG00000004438	-	100	76.016	ENSGAFG00000013962	dars	51	76.952	Gambusia_affinis
ENSCSAVG00000004438	-	100	76.829	ENSGACG00000007146	dars	51	78.067	Gasterosteus_aculeatus
ENSCSAVG00000004438	-	93	30.112	ENSGACG00000012085	nars2	56	30.112	Gasterosteus_aculeatus
ENSCSAVG00000004438	-	100	76.016	ENSGAGG00000017647	DARS	56	76.952	Gopherus_agassizii
ENSCSAVG00000004438	-	100	75.203	ENSGGOG00000007482	DARS	54	76.580	Gorilla_gorilla
ENSCSAVG00000004438	-	100	76.016	ENSHBUG00000001232	dars	51	77.695	Haplochromis_burtoni
ENSCSAVG00000004438	-	100	71.138	ENSHGLG00000009508	-	56	72.862	Heterocephalus_glaber_female
ENSCSAVG00000004438	-	100	76.423	ENSHGLG00000014945	DARS	54	77.695	Heterocephalus_glaber_female
ENSCSAVG00000004438	-	100	71.545	ENSHGLG00100018416	-	56	73.234	Heterocephalus_glaber_male
ENSCSAVG00000004438	-	100	76.423	ENSHGLG00100013852	DARS	54	77.695	Heterocephalus_glaber_male
ENSCSAVG00000004438	-	100	75.610	ENSHCOG00000018964	dars	50	76.952	Hippocampus_comes
ENSCSAVG00000004438	-	100	76.423	ENSIPUG00000010037	dars	58	77.695	Ictalurus_punctatus
ENSCSAVG00000004438	-	100	76.423	ENSSTOG00000006292	DARS	54	77.695	Ictidomys_tridecemlineatus
ENSCSAVG00000004438	-	100	75.610	ENSJJAG00000009396	Dars	53	76.952	Jaculus_jaculus
ENSCSAVG00000004438	-	100	76.829	ENSKMAG00000014958	dars	54	78.067	Kryptolebias_marmoratus
ENSCSAVG00000004438	-	94	30.451	ENSKMAG00000004015	nars2	56	30.451	Kryptolebias_marmoratus
ENSCSAVG00000004438	-	100	76.829	ENSLBEG00000000879	dars	53	78.067	Labrus_bergylta
ENSCSAVG00000004438	-	100	77.236	ENSLACG00000009996	DARS	51	78.439	Latimeria_chalumnae
ENSCSAVG00000004438	-	100	77.642	ENSLOCG00000000902	dars	51	78.810	Lepisosteus_oculatus
ENSCSAVG00000004438	-	100	75.203	ENSLAFG00000015092	DARS	55	76.580	Loxodonta_africana
ENSCSAVG00000004438	-	100	75.203	ENSMFAG00000008693	DARS	54	76.580	Macaca_fascicularis
ENSCSAVG00000004438	-	100	75.203	ENSMMUG00000040854	DARS	100	62.791	Macaca_mulatta
ENSCSAVG00000004438	-	100	75.203	ENSMNEG00000028601	DARS	54	76.580	Macaca_nemestrina
ENSCSAVG00000004438	-	100	75.203	ENSMLEG00000010853	DARS	54	76.580	Mandrillus_leucophaeus
ENSCSAVG00000004438	-	100	76.016	ENSMAMG00000017160	dars	51	77.323	Mastacembelus_armatus
ENSCSAVG00000004438	-	100	76.016	ENSMZEG00005012535	dars	50	77.695	Maylandia_zebra
ENSCSAVG00000004438	-	100	69.512	ENSMGAG00000012501	DARS	53	71.004	Meleagris_gallopavo
ENSCSAVG00000004438	-	88	76.667	ENSMAUG00000017400	Dars	57	76.667	Mesocricetus_auratus
ENSCSAVG00000004438	-	100	76.016	ENSMICG00000013832	DARS	54	77.323	Microcebus_murinus
ENSCSAVG00000004438	-	100	75.610	ENSMMOG00000005673	dars	55	76.952	Mola_mola
ENSCSAVG00000004438	-	100	76.016	ENSMODG00000001056	DARS	54	77.323	Monodelphis_domestica
ENSCSAVG00000004438	-	100	71.545	ENSMALG00000005905	dars	54	73.234	Monopterus_albus
ENSCSAVG00000004438	-	98	69.888	MGP_CAROLIEiJ_G0014547	Dars	54	69.888	Mus_caroli
ENSCSAVG00000004438	-	100	75.610	ENSMUSG00000026356	Dars	54	76.952	Mus_musculus
ENSCSAVG00000004438	-	94	75.862	MGP_PahariEiJ_G0027783	Dars	51	75.862	Mus_pahari
ENSCSAVG00000004438	-	100	75.610	MGP_SPRETEiJ_G0015354	Dars	54	76.952	Mus_spretus
ENSCSAVG00000004438	-	100	75.610	ENSMPUG00000002259	DARS	54	76.952	Mustela_putorius_furo
ENSCSAVG00000004438	-	100	75.610	ENSMLUG00000005671	DARS	54	76.952	Myotis_lucifugus
ENSCSAVG00000004438	-	100	75.203	ENSNGAG00000010888	-	54	76.580	Nannospalax_galili
ENSCSAVG00000004438	-	99	47.236	ENSNGAG00000023074	-	50	62.844	Nannospalax_galili
ENSCSAVG00000004438	-	100	76.016	ENSNBRG00000020068	dars	51	77.695	Neolamprologus_brichardi
ENSCSAVG00000004438	-	100	75.203	ENSNLEG00000032858	DARS	54	76.580	Nomascus_leucogenys
ENSCSAVG00000004438	-	99	75.000	ENSOPRG00000002960	DARS	54	71.429	Ochotona_princeps
ENSCSAVG00000004438	-	100	64.257	ENSODEG00000007800	DARS	53	65.399	Octodon_degus
ENSCSAVG00000004438	-	100	76.016	ENSONIG00000004402	dars	51	77.695	Oreochromis_niloticus
ENSCSAVG00000004438	-	64	35.659	ENSOANG00000022590	-	54	35.659	Ornithorhynchus_anatinus
ENSCSAVG00000004438	-	100	76.016	ENSOANG00000007989	DARS	56	76.952	Ornithorhynchus_anatinus
ENSCSAVG00000004438	-	100	75.203	ENSOCUG00000014790	DARS	54	76.580	Oryctolagus_cuniculus
ENSCSAVG00000004438	-	100	75.610	ENSORLG00000026356	dars	51	76.952	Oryzias_latipes
ENSCSAVG00000004438	-	100	75.610	ENSORLG00020008455	dars	51	76.952	Oryzias_latipes_hni
ENSCSAVG00000004438	-	100	75.610	ENSORLG00015005327	dars	51	76.952	Oryzias_latipes_hsok
ENSCSAVG00000004438	-	100	75.610	ENSOMEG00000015997	dars	51	76.952	Oryzias_melastigma
ENSCSAVG00000004438	-	100	75.610	ENSOGAG00000005919	DARS	54	76.952	Otolemur_garnettii
ENSCSAVG00000004438	-	100	75.203	ENSOARG00000010544	DARS	54	76.580	Ovis_aries
ENSCSAVG00000004438	-	100	75.203	ENSPPAG00000039644	DARS	54	76.580	Pan_paniscus
ENSCSAVG00000004438	-	100	75.610	ENSPPRG00000024294	DARS	54	76.952	Panthera_pardus
ENSCSAVG00000004438	-	100	75.610	ENSPTIG00000004863	DARS	54	76.952	Panthera_tigris_altaica
ENSCSAVG00000004438	-	100	75.203	ENSPTRG00000012500	DARS	54	76.580	Pan_troglodytes
ENSCSAVG00000004438	-	100	75.203	ENSPANG00000008858	DARS	54	76.580	Papio_anubis
ENSCSAVG00000004438	-	98	30.556	ENSPANG00000025887	NARS2	55	30.996	Papio_anubis
ENSCSAVG00000004438	-	100	77.642	ENSPKIG00000010740	dars	55	78.810	Paramormyrops_kingsleyae
ENSCSAVG00000004438	-	94	30.483	ENSPSIG00000003892	NARS2	55	30.483	Pelodiscus_sinensis
ENSCSAVG00000004438	-	100	75.610	ENSPSIG00000008849	DARS	54	76.580	Pelodiscus_sinensis
ENSCSAVG00000004438	-	100	76.829	ENSPMGG00000005165	dars	52	78.067	Periophthalmus_magnuspinnatus
ENSCSAVG00000004438	-	100	75.610	ENSPEMG00000019511	Dars	56	76.952	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004438	-	100	76.829	ENSPMAG00000009116	dars	51	78.067	Petromyzon_marinus
ENSCSAVG00000004438	-	100	75.610	ENSPCIG00000006838	DARS	56	76.952	Phascolarctos_cinereus
ENSCSAVG00000004438	-	100	76.016	ENSPFOG00000010159	dars	50	76.952	Poecilia_formosa
ENSCSAVG00000004438	-	100	76.016	ENSPLAG00000020675	dars	51	76.952	Poecilia_latipinna
ENSCSAVG00000004438	-	100	76.016	ENSPMEG00000006602	dars	51	76.952	Poecilia_mexicana
ENSCSAVG00000004438	-	100	76.016	ENSPREG00000014466	dars	55	74.349	Poecilia_reticulata
ENSCSAVG00000004438	-	100	74.797	ENSPPYG00000012822	DARS	55	76.208	Pongo_abelii
ENSCSAVG00000004438	-	100	76.016	ENSPCAG00000016286	DARS	54	77.323	Procavia_capensis
ENSCSAVG00000004438	-	100	75.610	ENSPCOG00000008377	DARS	54	76.952	Propithecus_coquereli
ENSCSAVG00000004438	-	98	68.030	ENSPVAG00000011856	DARS	54	68.030	Pteropus_vampyrus
ENSCSAVG00000004438	-	100	76.016	ENSPNYG00000016403	dars	51	77.695	Pundamilia_nyererei
ENSCSAVG00000004438	-	99	72.222	ENSPNAG00000014771	dars	55	71.747	Pygocentrus_nattereri
ENSCSAVG00000004438	-	100	75.610	ENSRNOG00000003743	Dars	54	76.952	Rattus_norvegicus
ENSCSAVG00000004438	-	100	75.203	ENSRBIG00000001796	DARS	54	76.580	Rhinopithecus_bieti
ENSCSAVG00000004438	-	100	75.203	ENSRROG00000037355	DARS	63	76.580	Rhinopithecus_roxellana
ENSCSAVG00000004438	-	100	75.203	ENSSBOG00000009265	DARS	54	76.580	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004438	-	100	75.709	ENSSHAG00000001175	DARS	68	77.037	Sarcophilus_harrisii
ENSCSAVG00000004438	-	100	76.016	ENSSFOG00015012900	dars	51	77.323	Scleropages_formosus
ENSCSAVG00000004438	-	100	75.610	ENSSMAG00000006714	dars	51	76.952	Scophthalmus_maximus
ENSCSAVG00000004438	-	93	30.112	ENSSMAG00000001927	nars2	54	30.112	Scophthalmus_maximus
ENSCSAVG00000004438	-	100	76.016	ENSSDUG00000012483	dars	51	77.323	Seriola_dumerili
ENSCSAVG00000004438	-	100	76.423	ENSSLDG00000021477	dars	51	77.695	Seriola_lalandi_dorsalis
ENSCSAVG00000004438	-	99	67.677	ENSSARG00000005046	DARS	56	68.401	Sorex_araneus
ENSCSAVG00000004438	-	100	73.984	ENSSPUG00000004559	DARS	57	75.093	Sphenodon_punctatus
ENSCSAVG00000004438	-	100	74.797	ENSSPAG00000007022	dars	51	76.208	Stegastes_partitus
ENSCSAVG00000004438	-	100	74.390	ENSSSCG00000015689	DARS	57	75.836	Sus_scrofa
ENSCSAVG00000004438	-	100	77.236	ENSTGUG00000011810	DARS	56	78.439	Taeniopygia_guttata
ENSCSAVG00000004438	-	100	76.016	ENSTRUG00000009030	dars	55	75.465	Takifugu_rubripes
ENSCSAVG00000004438	-	61	31.967	ENSTNIG00000001885	-	85	31.967	Tetraodon_nigroviridis
ENSCSAVG00000004438	-	100	76.423	ENSTNIG00000010990	dars	51	77.695	Tetraodon_nigroviridis
ENSCSAVG00000004438	-	100	75.610	ENSTTRG00000000974	DARS	54	76.952	Tursiops_truncatus
ENSCSAVG00000004438	-	100	75.203	ENSUAMG00000007125	-	100	75.203	Ursus_americanus
ENSCSAVG00000004438	-	100	75.203	ENSUMAG00000005942	DARS	54	76.580	Ursus_maritimus
ENSCSAVG00000004438	-	100	75.203	ENSVPAG00000007350	DARS	56	76.580	Vicugna_pacos
ENSCSAVG00000004438	-	100	75.610	ENSVVUG00000007081	DARS	54	76.952	Vulpes_vulpes
ENSCSAVG00000004438	-	100	75.203	ENSXETG00000025033	dars	51	76.580	Xenopus_tropicalis
ENSCSAVG00000004438	-	100	76.423	ENSXCOG00000014377	dars	51	77.323	Xiphophorus_couchianus
ENSCSAVG00000004438	-	100	76.423	ENSXMAG00000003657	dars	51	77.323	Xiphophorus_maculatus