EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2865 bases
Position: chrreftig_435:64053-66917
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007460	RRM_1	PF00076.22	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007557	-	414	-	ENSCSAVP00000007460	120 (aa)	-	H2YQ52

Gene Model

Click here to download ENSCSAVG00000004457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004457	-	91	44.944	ENSCSAVG00000010397	-	60	44.944
ENSCSAVG00000004457	-	82	30.303	ENSCSAVG00000009321	-	51	30.303
ENSCSAVG00000004457	-	91	38.889	ENSCSAVG00000000472	-	89	38.889
ENSCSAVG00000004457	-	95	42.105	ENSCSAVG00000000188	-	53	42.105
ENSCSAVG00000004457	-	100	41.667	ENSCSAVG00000009774	-	62	42.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004457	-	96	50.000	ENSG00000071626	DAZAP1	50	49.593	Homo_sapiens
ENSCSAVG00000004457	-	99	48.305	ENSACAG00000005366	-	100	48.305	Anolis_carolinensis
ENSCSAVG00000004457	-	96	49.593	ENSANAG00000036160	DAZAP1	50	49.593	Aotus_nancymaae
ENSCSAVG00000004457	-	90	37.963	WBGene00001999	hrp-1	54	37.963	Caenorhabditis_elegans
ENSCSAVG00000004457	-	96	49.593	ENSCAFG00000019528	DAZAP1	65	48.649	Canis_familiaris
ENSCSAVG00000004457	-	95	48.739	ENSTSYG00000027054	DAZAP1	51	48.739	Carlito_syrichta
ENSCSAVG00000004457	-	96	50.000	ENSCPOG00000020185	DAZAP1	96	50.000	Cavia_porcellus
ENSCSAVG00000004457	-	96	49.593	ENSCCAG00000023519	DAZAP1	50	49.593	Cebus_capucinus
ENSCSAVG00000004457	-	96	49.593	ENSCATG00000029559	DAZAP1	50	49.593	Cercocebus_atys
ENSCSAVG00000004457	-	95	49.153	ENSCLAG00000009221	DAZAP1	99	49.153	Chinchilla_lanigera
ENSCSAVG00000004457	-	96	71.304	ENSCING00000022958	-	96	71.304	Ciona_intestinalis
ENSCSAVG00000004457	-	96	50.000	ENSCGRG00001021763	Cirbp	63	31.250	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004457	-	96	49.180	ENSDARG00000070846	dazap1	79	50.820	Danio_rerio
ENSCSAVG00000004457	-	96	50.000	ENSELUG00000010286	dazap1	55	47.863	Esox_lucius
ENSCSAVG00000004457	-	96	50.000	ENSGMOG00000001142	dazap1	55	50.000	Gadus_morhua
ENSCSAVG00000004457	-	96	48.361	ENSGACG00000008259	dazap1	51	47.200	Gasterosteus_aculeatus
ENSCSAVG00000004457	-	96	49.180	ENSIPUG00000006899	dazap1	50	48.305	Ictalurus_punctatus
ENSCSAVG00000004457	-	95	48.739	ENSMFAG00000000789	DAZAP1	51	48.739	Macaca_fascicularis
ENSCSAVG00000004457	-	96	49.593	ENSMNEG00000040014	DAZAP1	50	49.593	Macaca_nemestrina
ENSCSAVG00000004457	-	95	48.739	ENSMLEG00000035079	DAZAP1	51	48.739	Mandrillus_leucophaeus
ENSCSAVG00000004457	-	96	49.593	ENSMAUG00000012188	Dazap1	98	49.580	Mesocricetus_auratus
ENSCSAVG00000004457	-	96	49.593	ENSMOCG00000016931	Dazap1	98	49.580	Microtus_ochrogaster
ENSCSAVG00000004457	-	97	49.593	ENSMODG00000005157	DAZAP1	51	49.593	Monodelphis_domestica
ENSCSAVG00000004457	-	96	50.000	MGP_CAROLIEiJ_G0015574	Dazap1	98	49.580	Mus_caroli
ENSCSAVG00000004457	-	96	50.000	ENSMUSG00000069565	Dazap1	98	49.580	Mus_musculus
ENSCSAVG00000004457	-	96	50.000	MGP_PahariEiJ_G0030987	Dazap1	98	49.580	Mus_pahari
ENSCSAVG00000004457	-	96	50.000	MGP_SPRETEiJ_G0016392	Dazap1	98	49.580	Mus_spretus
ENSCSAVG00000004457	-	95	48.739	ENSNLEG00000001563	DAZAP1	51	48.739	Nomascus_leucogenys
ENSCSAVG00000004457	-	95	48.739	ENSPPAG00000033205	DAZAP1	51	48.739	Pan_paniscus
ENSCSAVG00000004457	-	96	49.593	ENSPTRG00000010199	DAZAP1	50	49.593	Pan_troglodytes
ENSCSAVG00000004457	-	97	49.593	ENSPCIG00000011156	DAZAP1	51	49.593	Phascolarctos_cinereus
ENSCSAVG00000004457	-	96	49.593	ENSPPYG00000009316	DAZAP1	50	49.593	Pongo_abelii
ENSCSAVG00000004457	-	95	48.077	ENSPCAG00000006539	DAZAP1	73	48.077	Procavia_capensis
ENSCSAVG00000004457	-	96	50.000	ENSSMAG00000021047	dazap1	54	45.082	Scophthalmus_maximus
ENSCSAVG00000004457	-	82	49.057	ENSTGUG00000014159	-	91	49.057	Taeniopygia_guttata
ENSCSAVG00000004457	-	100	46.875	ENSUMAG00000005845	DAZAP1	55	48.739	Ursus_maritimus
ENSCSAVG00000004457	-	98	50.000	ENSXETG00000003704	dazap1	60	50.000	Xenopus_tropicalis