EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1968 bases
Position: chrreftig_77:1528975-1530942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007634	GTP_EFTU	PF00009.27	3.1e-55	1	1
ENSCSAVP00000007634	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007734	-	1968	-	ENSCSAVP00000007634	655 (aa)	-	H2YQM6

Gene Model

Click here to download ENSCSAVG00000004563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004563	-	59	36.269	ENSCSAVG00000008514	-	59	36.269
ENSCSAVG00000004563	-	55	43.056	ENSCSAVG00000002108	-	51	43.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004563	-	95	55.949	ENSG00000151806	GUF1	91	55.949	Homo_sapiens
ENSCSAVG00000004563	-	99	52.688	ENSAPOG00000000402	guf1	97	49.677	Acanthochromis_polyacanthus
ENSCSAVG00000004563	-	99	55.607	ENSAMEG00000016084	GUF1	95	55.607	Ailuropoda_melanoleuca
ENSCSAVG00000004563	-	95	52.174	ENSACIG00000005666	guf1	91	52.174	Amphilophus_citrinellus
ENSCSAVG00000004563	-	99	52.381	ENSAOCG00000006219	guf1	93	52.381	Amphiprion_ocellaris
ENSCSAVG00000004563	-	99	52.535	ENSAPEG00000008166	guf1	93	52.535	Amphiprion_percula
ENSCSAVG00000004563	-	99	52.227	ENSATEG00000018199	guf1	99	51.133	Anabas_testudineus
ENSCSAVG00000004563	-	95	56.320	ENSAPLG00000009504	GUF1	91	56.320	Anas_platyrhynchos
ENSCSAVG00000004563	-	98	53.333	ENSACAG00000007056	GUF1	94	53.333	Anolis_carolinensis
ENSCSAVG00000004563	-	93	55.810	ENSANAG00000010773	GUF1	99	53.074	Aotus_nancymaae
ENSCSAVG00000004563	-	99	52.535	ENSACLG00000022239	guf1	99	50.162	Astatotilapia_calliptera
ENSCSAVG00000004563	-	84	53.565	ENSAMXG00000005871	guf1	85	53.565	Astyanax_mexicanus
ENSCSAVG00000004563	-	95	54.984	ENSBTAG00000000285	GUF1	81	54.984	Bos_taurus
ENSCSAVG00000004563	-	99	43.570	WBGene00022862	ZK1236.1	99	43.570	Caenorhabditis_elegans
ENSCSAVG00000004563	-	95	55.627	ENSCJAG00000019056	-	99	52.751	Callithrix_jacchus
ENSCSAVG00000004563	-	94	57.120	ENSCAFG00000001850	GUF1	99	57.120	Canis_familiaris
ENSCSAVG00000004563	-	96	56.778	ENSCAFG00020003101	GUF1	97	57.074	Canis_lupus_dingo
ENSCSAVG00000004563	-	95	54.984	ENSCHIG00000010231	GUF1	94	54.984	Capra_hircus
ENSCSAVG00000004563	-	95	56.129	ENSTSYG00000010907	GUF1	99	53.236	Carlito_syrichta
ENSCSAVG00000004563	-	94	50.081	ENSCAPG00000014980	GUF1	97	58.233	Cavia_aperea
ENSCSAVG00000004563	-	93	55.684	ENSCPOG00000014267	GUF1	92	58.103	Cavia_porcellus
ENSCSAVG00000004563	-	95	55.305	ENSCCAG00000025409	GUF1	99	52.427	Cebus_capucinus
ENSCSAVG00000004563	-	98	54.264	ENSCATG00000040932	GUF1	99	52.104	Cercocebus_atys
ENSCSAVG00000004563	-	95	55.250	ENSCLAG00000007505	GUF1	98	58.491	Chinchilla_lanigera
ENSCSAVG00000004563	-	98	54.264	ENSCSAG00000017118	GUF1	94	54.264	Chlorocebus_sabaeus
ENSCSAVG00000004563	-	99	51.970	ENSCHOG00000001355	GUF1	96	51.970	Choloepus_hoffmanni
ENSCSAVG00000004563	-	99	52.388	ENSCPBG00000025668	GUF1	95	52.388	Chrysemys_picta_bellii
ENSCSAVG00000004563	-	95	80.614	ENSCING00000003163	-	99	80.614	Ciona_intestinalis
ENSCSAVG00000004563	-	95	55.466	ENSCANG00000030205	GUF1	99	52.589	Colobus_angolensis_palliatus
ENSCSAVG00000004563	-	95	54.604	ENSCGRG00001015008	Guf1	92	58.209	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004563	-	82	54.104	ENSCGRG00000000314	Guf1	98	54.104	Cricetulus_griseus_crigri
ENSCSAVG00000004563	-	96	50.958	ENSCSEG00000014139	guf1	92	50.631	Cynoglossus_semilaevis
ENSCSAVG00000004563	-	94	51.613	ENSCVAG00000021129	guf1	99	51.613	Cyprinodon_variegatus
ENSCSAVG00000004563	-	96	54.372	ENSDARG00000029088	guf1	92	54.372	Danio_rerio
ENSCSAVG00000004563	-	99	51.829	ENSDNOG00000007345	GUF1	96	51.829	Dasypus_novemcinctus
ENSCSAVG00000004563	-	95	51.212	ENSDORG00000005730	Guf1	92	59.328	Dipodomys_ordii
ENSCSAVG00000004563	-	93	45.588	FBgn0024182	waw	86	45.588	Drosophila_melanogaster
ENSCSAVG00000004563	-	83	65.803	ENSETEG00000015249	GUF1	82	65.803	Echinops_telfairi
ENSCSAVG00000004563	-	99	53.941	ENSEASG00005008712	GUF1	95	53.941	Equus_asinus_asinus
ENSCSAVG00000004563	-	99	53.941	ENSECAG00000019296	GUF1	85	53.941	Equus_caballus
ENSCSAVG00000004563	-	83	47.368	ENSEEUG00000002894	GUF1	81	47.368	Erinaceus_europaeus
ENSCSAVG00000004563	-	96	53.981	ENSELUG00000021933	guf1	99	54.207	Esox_lucius
ENSCSAVG00000004563	-	97	54.631	ENSFCAG00000028580	GUF1	93	54.631	Felis_catus
ENSCSAVG00000004563	-	80	53.846	ENSFALG00000002932	GUF1	99	53.846	Ficedula_albicollis
ENSCSAVG00000004563	-	95	55.250	ENSFDAG00000010613	GUF1	94	58.491	Fukomys_damarensis
ENSCSAVG00000004563	-	99	53.364	ENSFHEG00000016859	guf1	99	52.427	Fundulus_heteroclitus
ENSCSAVG00000004563	-	99	52.995	ENSGMOG00000005706	guf1	98	52.995	Gadus_morhua
ENSCSAVG00000004563	-	97	54.859	ENSGALG00000014217	GUF1	94	54.859	Gallus_gallus
ENSCSAVG00000004563	-	99	54.531	ENSGAFG00000016068	guf1	99	53.560	Gambusia_affinis
ENSCSAVG00000004563	-	99	52.842	ENSGACG00000018700	guf1	98	54.194	Gasterosteus_aculeatus
ENSCSAVG00000004563	-	94	54.854	ENSGAGG00000001879	GUF1	99	54.854	Gopherus_agassizii
ENSCSAVG00000004563	-	95	55.788	ENSGGOG00000001699	GUF1	99	52.913	Gorilla_gorilla
ENSCSAVG00000004563	-	99	52.688	ENSHBUG00000001529	guf1	99	51.456	Haplochromis_burtoni
ENSCSAVG00000004563	-	95	55.897	ENSHGLG00000014421	-	92	59.245	Heterocephalus_glaber_female
ENSCSAVG00000004563	-	83	49.632	ENSHGLG00000002637	-	87	49.632	Heterocephalus_glaber_female
ENSCSAVG00000004563	-	82	50.000	ENSHGLG00100002291	-	90	50.000	Heterocephalus_glaber_male
ENSCSAVG00000004563	-	95	55.897	ENSHGLG00100002522	-	92	59.245	Heterocephalus_glaber_male
ENSCSAVG00000004563	-	96	53.006	ENSHCOG00000004355	guf1	99	51.133	Hippocampus_comes
ENSCSAVG00000004563	-	96	52.456	ENSIPUG00000020387	GUF1	99	50.080	Ictalurus_punctatus
ENSCSAVG00000004563	-	95	55.574	ENSSTOG00000003301	GUF1	92	58.955	Ictidomys_tridecemlineatus
ENSCSAVG00000004563	-	95	55.250	ENSJJAG00000005872	Guf1	98	58.955	Jaculus_jaculus
ENSCSAVG00000004563	-	99	52.842	ENSKMAG00000008683	guf1	91	52.791	Kryptolebias_marmoratus
ENSCSAVG00000004563	-	99	53.917	ENSLBEG00000028126	guf1	99	52.751	Labrus_bergylta
ENSCSAVG00000004563	-	95	54.839	ENSLACG00000007692	GUF1	93	54.428	Latimeria_chalumnae
ENSCSAVG00000004563	-	97	52.524	ENSLOCG00000012397	guf1	93	52.524	Lepisosteus_oculatus
ENSCSAVG00000004563	-	95	55.538	ENSLAFG00000011040	GUF1	91	55.538	Loxodonta_africana
ENSCSAVG00000004563	-	98	54.419	ENSMFAG00000029386	GUF1	99	52.265	Macaca_fascicularis
ENSCSAVG00000004563	-	98	54.419	ENSMMUG00000009270	GUF1	99	52.265	Macaca_mulatta
ENSCSAVG00000004563	-	98	54.419	ENSMNEG00000008365	GUF1	99	52.265	Macaca_nemestrina
ENSCSAVG00000004563	-	98	54.264	ENSMLEG00000033225	GUF1	99	52.104	Mandrillus_leucophaeus
ENSCSAVG00000004563	-	99	52.842	ENSMAMG00000015049	guf1	93	52.842	Mastacembelus_armatus
ENSCSAVG00000004563	-	99	52.535	ENSMZEG00005005816	guf1	99	48.706	Maylandia_zebra
ENSCSAVG00000004563	-	95	55.466	ENSMGAG00000012118	GUF1	96	58.736	Meleagris_gallopavo
ENSCSAVG00000004563	-	95	55.627	ENSMICG00000016714	GUF1	92	55.627	Microcebus_murinus
ENSCSAVG00000004563	-	95	52.742	ENSMOCG00000011627	Guf1	95	52.742	Microtus_ochrogaster
ENSCSAVG00000004563	-	95	49.839	ENSMMOG00000009682	guf1	91	49.839	Mola_mola
ENSCSAVG00000004563	-	99	53.905	ENSMODG00000020592	GUF1	94	53.905	Monodelphis_domestica
ENSCSAVG00000004563	-	99	52.923	ENSMALG00000011894	guf1	97	50.965	Monopterus_albus
ENSCSAVG00000004563	-	95	54.443	MGP_CAROLIEiJ_G0027274	Guf1	92	58.582	Mus_caroli
ENSCSAVG00000004563	-	95	54.604	ENSMUSG00000029208	Guf1	92	58.582	Mus_musculus
ENSCSAVG00000004563	-	95	54.604	MGP_PahariEiJ_G0017055	Guf1	92	58.582	Mus_pahari
ENSCSAVG00000004563	-	95	54.766	MGP_SPRETEiJ_G0028269	Guf1	92	58.582	Mus_spretus
ENSCSAVG00000004563	-	95	56.109	ENSMPUG00000004975	GUF1	91	56.109	Mustela_putorius_furo
ENSCSAVG00000004563	-	96	55.573	ENSMLUG00000002116	GUF1	92	55.573	Myotis_lucifugus
ENSCSAVG00000004563	-	95	54.766	ENSNGAG00000012997	Guf1	92	58.582	Nannospalax_galili
ENSCSAVG00000004563	-	94	51.133	ENSNBRG00000021743	guf1	99	51.133	Neolamprologus_brichardi
ENSCSAVG00000004563	-	95	55.788	ENSNLEG00000017299	GUF1	99	52.913	Nomascus_leucogenys
ENSCSAVG00000004563	-	69	50.781	ENSMEUG00000013023	-	87	50.781	Notamacropus_eugenii
ENSCSAVG00000004563	-	71	42.949	ENSOPRG00000005400	-	73	42.949	Ochotona_princeps
ENSCSAVG00000004563	-	94	55.340	ENSODEG00000000238	GUF1	99	55.340	Octodon_degus
ENSCSAVG00000004563	-	97	53.943	ENSONIG00000015782	guf1	98	53.943	Oreochromis_niloticus
ENSCSAVG00000004563	-	94	53.398	ENSOANG00000007142	GUF1	99	53.398	Ornithorhynchus_anatinus
ENSCSAVG00000004563	-	95	55.305	ENSOCUG00000017915	GUF1	92	55.305	Oryctolagus_cuniculus
ENSCSAVG00000004563	-	96	53.639	ENSORLG00000009541	guf1	98	53.639	Oryzias_latipes
ENSCSAVG00000004563	-	78	56.140	ENSORLG00020019714	guf1	99	56.140	Oryzias_latipes_hni
ENSCSAVG00000004563	-	96	53.481	ENSORLG00015014707	guf1	92	53.481	Oryzias_latipes_hsok
ENSCSAVG00000004563	-	96	54.675	ENSOMEG00000016542	guf1	92	54.675	Oryzias_melastigma
ENSCSAVG00000004563	-	95	52.146	ENSOGAG00000014573	GUF1	97	52.146	Otolemur_garnettii
ENSCSAVG00000004563	-	95	54.984	ENSOARG00000015231	GUF1	91	54.984	Ovis_aries
ENSCSAVG00000004563	-	95	53.612	ENSPPAG00000031418	GUF1	99	50.727	Pan_paniscus
ENSCSAVG00000004563	-	97	54.160	ENSPPRG00000007366	GUF1	93	54.160	Panthera_pardus
ENSCSAVG00000004563	-	97	54.160	ENSPTIG00000009828	GUF1	93	54.160	Panthera_tigris_altaica
ENSCSAVG00000004563	-	95	55.949	ENSPTRG00000016022	GUF1	99	50.727	Pan_troglodytes
ENSCSAVG00000004563	-	98	54.264	ENSPANG00000020532	GUF1	99	52.104	Papio_anubis
ENSCSAVG00000004563	-	99	52.761	ENSPKIG00000000883	guf1	99	47.987	Paramormyrops_kingsleyae
ENSCSAVG00000004563	-	62	57.108	ENSPSIG00000005099	GUF1	96	57.108	Pelodiscus_sinensis
ENSCSAVG00000004563	-	94	51.696	ENSPMGG00000021369	guf1	99	52.181	Periophthalmus_magnuspinnatus
ENSCSAVG00000004563	-	95	51.535	ENSPEMG00000021702	Guf1	95	51.535	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004563	-	67	48.073	ENSPMAG00000007928	guf1	99	48.073	Petromyzon_marinus
ENSCSAVG00000004563	-	98	54.304	ENSPCIG00000028571	GUF1	99	55.340	Phascolarctos_cinereus
ENSCSAVG00000004563	-	99	54.378	ENSPFOG00000006450	guf1	93	54.378	Poecilia_formosa
ENSCSAVG00000004563	-	99	51.835	ENSPLAG00000023710	guf1	94	51.835	Poecilia_latipinna
ENSCSAVG00000004563	-	97	54.732	ENSPMEG00000023603	guf1	92	54.732	Poecilia_mexicana
ENSCSAVG00000004563	-	97	53.846	ENSPMEG00000014175	guf1	92	53.846	Poecilia_mexicana
ENSCSAVG00000004563	-	99	53.763	ENSPREG00000003893	guf1	99	51.294	Poecilia_reticulata
ENSCSAVG00000004563	-	95	56.058	ENSPPYG00000014702	GUF1	90	56.058	Pongo_abelii
ENSCSAVG00000004563	-	95	47.040	ENSPCAG00000016375	GUF1	99	47.040	Procavia_capensis
ENSCSAVG00000004563	-	93	51.391	ENSPVAG00000010262	GUF1	93	51.391	Pteropus_vampyrus
ENSCSAVG00000004563	-	99	52.688	ENSPNYG00000000062	guf1	99	51.456	Pundamilia_nyererei
ENSCSAVG00000004563	-	96	52.057	ENSPNAG00000025157	guf1	99	50.404	Pygocentrus_nattereri
ENSCSAVG00000004563	-	95	54.604	ENSRNOG00000002207	Guf1	92	54.604	Rattus_norvegicus
ENSCSAVG00000004563	-	95	51.603	ENSRBIG00000042292	GUF1	99	50.971	Rhinopithecus_bieti
ENSCSAVG00000004563	-	95	55.466	ENSRROG00000038444	GUF1	99	52.913	Rhinopithecus_roxellana
ENSCSAVG00000004563	-	99	41.994	YLR289W	-	99	41.994	Saccharomyces_cerevisiae
ENSCSAVG00000004563	-	95	55.627	ENSSBOG00000030808	GUF1	91	55.627	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004563	-	99	55.023	ENSSHAG00000003081	GUF1	95	55.023	Sarcophilus_harrisii
ENSCSAVG00000004563	-	99	52.214	ENSSFOG00015004296	guf1	99	50.971	Scleropages_formosus
ENSCSAVG00000004563	-	96	53.883	ENSSMAG00000013101	guf1	99	51.618	Scophthalmus_maximus
ENSCSAVG00000004563	-	99	53.988	ENSSDUG00000013385	guf1	99	52.589	Seriola_dumerili
ENSCSAVG00000004563	-	99	53.681	ENSSLDG00000022775	guf1	96	55.161	Seriola_lalandi_dorsalis
ENSCSAVG00000004563	-	97	54.631	ENSSPUG00000002681	GUF1	93	54.631	Sphenodon_punctatus
ENSCSAVG00000004563	-	99	53.303	ENSSPAG00000010713	guf1	99	51.942	Stegastes_partitus
ENSCSAVG00000004563	-	95	56.613	ENSSSCG00000008807	GUF1	91	56.613	Sus_scrofa
ENSCSAVG00000004563	-	95	55.145	ENSTGUG00000008453	GUF1	99	55.145	Taeniopygia_guttata
ENSCSAVG00000004563	-	99	53.303	ENSTRUG00000007961	guf1	99	51.597	Takifugu_rubripes
ENSCSAVG00000004563	-	95	54.823	ENSTNIG00000004218	guf1	99	54.823	Tetraodon_nigroviridis
ENSCSAVG00000004563	-	55	44.681	ENSTBEG00000016947	-	70	44.681	Tupaia_belangeri
ENSCSAVG00000004563	-	95	53.215	ENSTTRG00000016020	GUF1	91	53.215	Tursiops_truncatus
ENSCSAVG00000004563	-	99	55.828	ENSUAMG00000026589	GUF1	96	55.828	Ursus_americanus
ENSCSAVG00000004563	-	99	55.760	ENSUMAG00000001595	GUF1	94	55.760	Ursus_maritimus
ENSCSAVG00000004563	-	95	55.466	ENSVPAG00000011078	GUF1	91	55.466	Vicugna_pacos
ENSCSAVG00000004563	-	94	56.472	ENSVVUG00000023099	GUF1	99	56.472	Vulpes_vulpes
ENSCSAVG00000004563	-	95	55.466	ENSXETG00000008432	guf1	99	55.466	Xenopus_tropicalis
ENSCSAVG00000004563	-	94	53.635	ENSXCOG00000008816	guf1	99	53.635	Xiphophorus_couchianus
ENSCSAVG00000004563	-	98	54.334	ENSXMAG00000004189	guf1	99	53.398	Xiphophorus_maculatus