EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1014 bases
Position: chrreftig_452:3385-4398
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007642	MMR_HSR1	PF01926.23	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007742	-	1014	-	ENSCSAVP00000007642	338 (aa)	-	H2YQN4

Gene Model

Click here to download ENSCSAVG00000004569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004569	-	96	45.706	ENSG00000148824	MTG1	95	47.887	Homo_sapiens
ENSCSAVG00000004569	-	92	45.513	ENSAPOG00000003960	mtg1	96	45.513	Acanthochromis_polyacanthus
ENSCSAVG00000004569	-	96	43.827	ENSAMEG00000003193	-	95	43.827	Ailuropoda_melanoleuca
ENSCSAVG00000004569	-	64	44.907	ENSACIG00000012614	mtg1	87	44.907	Amphilophus_citrinellus
ENSCSAVG00000004569	-	92	46.154	ENSAOCG00000017208	mtg1	97	46.154	Amphiprion_ocellaris
ENSCSAVG00000004569	-	92	46.474	ENSAPEG00000017169	mtg1	97	46.474	Amphiprion_percula
ENSCSAVG00000004569	-	92	44.051	ENSATEG00000022220	mtg1	96	44.051	Anabas_testudineus
ENSCSAVG00000004569	-	77	42.471	ENSAPLG00000014353	-	99	42.471	Anas_platyrhynchos
ENSCSAVG00000004569	-	93	44.164	ENSACAG00000011844	-	95	44.164	Anolis_carolinensis
ENSCSAVG00000004569	-	86	47.423	ENSANAG00000023128	-	95	47.423	Aotus_nancymaae
ENSCSAVG00000004569	-	92	46.795	ENSACLG00000006398	mtg1	90	46.795	Astatotilapia_calliptera
ENSCSAVG00000004569	-	92	45.679	ENSAMXG00000021084	mtg1	95	47.687	Astyanax_mexicanus
ENSCSAVG00000004569	-	99	44.611	ENSBTAG00000020304	-	99	44.611	Bos_taurus
ENSCSAVG00000004569	-	95	36.047	WBGene00022054	Y67D2.4	95	36.047	Caenorhabditis_elegans
ENSCSAVG00000004569	-	88	48.311	ENSCJAG00000004921	-	87	48.311	Callithrix_jacchus
ENSCSAVG00000004569	-	62	43.602	ENSCAFG00000029027	-	99	43.602	Canis_familiaris
ENSCSAVG00000004569	-	95	45.171	ENSCAFG00020020460	-	74	45.171	Canis_lupus_dingo
ENSCSAVG00000004569	-	99	44.611	ENSCHIG00000018611	-	98	44.611	Capra_hircus
ENSCSAVG00000004569	-	88	47.635	ENSTSYG00000007867	-	87	47.635	Carlito_syrichta
ENSCSAVG00000004569	-	84	35.315	ENSCAPG00000000299	-	97	35.315	Cavia_aperea
ENSCSAVG00000004569	-	88	47.973	ENSCPOG00000030768	-	87	47.973	Cavia_porcellus
ENSCSAVG00000004569	-	88	48.311	ENSCCAG00000010828	-	87	48.311	Cebus_capucinus
ENSCSAVG00000004569	-	84	48.239	ENSCATG00000025147	-	95	48.239	Cercocebus_atys
ENSCSAVG00000004569	-	88	47.635	ENSCLAG00000003313	-	89	47.635	Chinchilla_lanigera
ENSCSAVG00000004569	-	96	46.319	ENSCSAG00000006621	-	96	46.319	Chlorocebus_sabaeus
ENSCSAVG00000004569	-	68	43.043	ENSCPBG00000011654	-	82	43.043	Chrysemys_picta_bellii
ENSCSAVG00000004569	-	95	72.586	ENSCING00000015202	-	99	72.586	Ciona_intestinalis
ENSCSAVG00000004569	-	88	49.324	ENSCANG00000032059	-	89	49.324	Colobus_angolensis_palliatus
ENSCSAVG00000004569	-	88	46.959	ENSCGRG00000014611	Mtg1	89	46.959	Cricetulus_griseus_crigri
ENSCSAVG00000004569	-	94	43.438	ENSCSEG00000007158	mtg1	99	43.438	Cynoglossus_semilaevis
ENSCSAVG00000004569	-	92	47.115	ENSCVAG00000003927	mtg1	97	47.115	Cyprinodon_variegatus
ENSCSAVG00000004569	-	71	42.562	ENSDARG00000069386	mtg1	99	42.562	Danio_rerio
ENSCSAVG00000004569	-	87	45.578	ENSDNOG00000023844	-	76	45.578	Dasypus_novemcinctus
ENSCSAVG00000004569	-	91	44.984	ENSDORG00000009355	Mtg1	93	44.984	Dipodomys_ordii
ENSCSAVG00000004569	-	92	37.975	FBgn0039020	CG17141	96	37.975	Drosophila_melanogaster
ENSCSAVG00000004569	-	88	47.651	ENSEBUG00000000594	mtg1	95	47.651	Eptatretus_burgeri
ENSCSAVG00000004569	-	92	47.419	ENSEASG00005015107	-	89	47.419	Equus_asinus_asinus
ENSCSAVG00000004569	-	92	47.419	ENSECAG00000014887	-	89	47.419	Equus_caballus
ENSCSAVG00000004569	-	53	47.778	ENSEEUG00000011899	-	94	47.778	Erinaceus_europaeus
ENSCSAVG00000004569	-	93	45.079	ENSELUG00000009753	mtg1	97	45.079	Esox_lucius
ENSCSAVG00000004569	-	92	46.452	ENSFCAG00000029471	-	96	46.127	Felis_catus
ENSCSAVG00000004569	-	85	43.299	ENSFALG00000013031	-	99	43.299	Ficedula_albicollis
ENSCSAVG00000004569	-	88	47.635	ENSFDAG00000014305	-	87	47.635	Fukomys_damarensis
ENSCSAVG00000004569	-	81	43.431	ENSFHEG00000005082	mtg1	93	43.431	Fundulus_heteroclitus
ENSCSAVG00000004569	-	93	44.127	ENSGMOG00000003500	mtg1	97	44.127	Gadus_morhua
ENSCSAVG00000004569	-	96	42.901	ENSGALG00000003549	MTG1	96	42.901	Gallus_gallus
ENSCSAVG00000004569	-	92	45.192	ENSGAFG00000008635	mtg1	97	45.192	Gambusia_affinis
ENSCSAVG00000004569	-	92	45.484	ENSGACG00000006834	mtg1	96	45.484	Gasterosteus_aculeatus
ENSCSAVG00000004569	-	92	46.452	ENSGAGG00000009492	-	97	46.452	Gopherus_agassizii
ENSCSAVG00000004569	-	96	46.012	ENSGGOG00000004729	-	96	46.012	Gorilla_gorilla
ENSCSAVG00000004569	-	92	46.474	ENSHBUG00000022572	mtg1	97	46.474	Haplochromis_burtoni
ENSCSAVG00000004569	-	88	48.649	ENSHGLG00000009989	-	87	48.649	Heterocephalus_glaber_female
ENSCSAVG00000004569	-	88	48.649	ENSHGLG00100008916	-	87	48.649	Heterocephalus_glaber_male
ENSCSAVG00000004569	-	92	45.192	ENSHCOG00000016724	mtg1	97	45.192	Hippocampus_comes
ENSCSAVG00000004569	-	96	46.012	ENSIPUG00000017854	mtg1	100	46.012	Ictalurus_punctatus
ENSCSAVG00000004569	-	88	45.608	ENSSTOG00000000426	-	90	45.608	Ictidomys_tridecemlineatus
ENSCSAVG00000004569	-	94	45.483	ENSJJAG00000020935	Mtg1	95	45.483	Jaculus_jaculus
ENSCSAVG00000004569	-	92	47.419	ENSKMAG00000020048	mtg1	96	47.419	Kryptolebias_marmoratus
ENSCSAVG00000004569	-	71	42.975	ENSLBEG00000014208	mtg1	99	42.975	Labrus_bergylta
ENSCSAVG00000004569	-	53	42.222	ENSLACG00000002736	mtg1	99	42.222	Latimeria_chalumnae
ENSCSAVG00000004569	-	71	42.975	ENSLOCG00000004254	mtg1	99	42.975	Lepisosteus_oculatus
ENSCSAVG00000004569	-	93	45.570	ENSLAFG00000022156	-	95	45.570	Loxodonta_africana
ENSCSAVG00000004569	-	81	48.905	ENSMFAG00000042851	-	76	48.905	Macaca_fascicularis
ENSCSAVG00000004569	-	84	48.239	ENSMNEG00000031866	-	95	48.239	Macaca_nemestrina
ENSCSAVG00000004569	-	85	48.432	ENSMLEG00000034394	-	95	48.432	Mandrillus_leucophaeus
ENSCSAVG00000004569	-	92	45.513	ENSMAMG00000004540	mtg1	97	45.513	Mastacembelus_armatus
ENSCSAVG00000004569	-	92	43.849	ENSMZEG00005003943	mtg1	90	43.849	Maylandia_zebra
ENSCSAVG00000004569	-	83	42.403	ENSMGAG00000001826	-	99	42.403	Meleagris_gallopavo
ENSCSAVG00000004569	-	88	47.635	ENSMAUG00000020820	Mtg1	89	47.635	Mesocricetus_auratus
ENSCSAVG00000004569	-	88	50.000	ENSMICG00000043833	-	87	50.000	Microcebus_murinus
ENSCSAVG00000004569	-	88	48.822	ENSMOCG00000010027	Mtg1	89	48.822	Microtus_ochrogaster
ENSCSAVG00000004569	-	92	41.987	ENSMMOG00000011001	mtg1	96	41.987	Mola_mola
ENSCSAVG00000004569	-	92	41.987	ENSMODG00000024403	-	93	41.987	Monodelphis_domestica
ENSCSAVG00000004569	-	98	41.791	ENSMODG00000010450	-	92	41.791	Monodelphis_domestica
ENSCSAVG00000004569	-	92	45.513	ENSMALG00000015822	mtg1	97	45.513	Monopterus_albus
ENSCSAVG00000004569	-	88	47.973	MGP_CAROLIEiJ_G0030633	Mtg1	89	47.973	Mus_caroli
ENSCSAVG00000004569	-	88	47.297	ENSMUSG00000039018	Mtg1	89	47.297	Mus_musculus
ENSCSAVG00000004569	-	88	48.822	MGP_PahariEiJ_G0013838	Mtg1	89	48.822	Mus_pahari
ENSCSAVG00000004569	-	88	47.297	MGP_SPRETEiJ_G0031744	Mtg1	89	47.297	Mus_spretus
ENSCSAVG00000004569	-	96	44.848	ENSMLUG00000005374	-	96	44.848	Myotis_lucifugus
ENSCSAVG00000004569	-	88	47.973	ENSNGAG00000004763	Mtg1	89	47.973	Nannospalax_galili
ENSCSAVG00000004569	-	92	44.164	ENSNBRG00000011077	mtg1	97	44.164	Neolamprologus_brichardi
ENSCSAVG00000004569	-	96	46.012	ENSNLEG00000002308	-	96	46.012	Nomascus_leucogenys
ENSCSAVG00000004569	-	71	46.250	ENSMEUG00000004898	-	94	46.250	Notamacropus_eugenii
ENSCSAVG00000004569	-	69	39.316	ENSOPRG00000001685	-	69	39.316	Ochotona_princeps
ENSCSAVG00000004569	-	88	46.959	ENSODEG00000016890	-	87	46.959	Octodon_degus
ENSCSAVG00000004569	-	86	46.048	ENSONIG00000009595	mtg1	100	46.048	Oreochromis_niloticus
ENSCSAVG00000004569	-	88	44.781	ENSOCUG00000000484	-	87	44.781	Oryctolagus_cuniculus
ENSCSAVG00000004569	-	92	46.474	ENSORLG00000009140	mtg1	97	46.474	Oryzias_latipes
ENSCSAVG00000004569	-	94	46.226	ENSORLG00020001803	mtg1	98	46.226	Oryzias_latipes_hni
ENSCSAVG00000004569	-	92	46.474	ENSORLG00015005779	mtg1	97	46.474	Oryzias_latipes_hsok
ENSCSAVG00000004569	-	94	44.340	ENSOMEG00000002293	mtg1	98	44.340	Oryzias_melastigma
ENSCSAVG00000004569	-	96	44.954	ENSOGAG00000008833	-	100	44.954	Otolemur_garnettii
ENSCSAVG00000004569	-	99	44.478	ENSOARG00000018459	-	98	44.478	Ovis_aries
ENSCSAVG00000004569	-	96	46.012	ENSPPAG00000031365	-	96	46.012	Pan_paniscus
ENSCSAVG00000004569	-	84	46.127	ENSPPRG00000004650	-	96	46.127	Panthera_pardus
ENSCSAVG00000004569	-	84	46.127	ENSPTIG00000011659	-	96	46.127	Panthera_tigris_altaica
ENSCSAVG00000004569	-	76	45.560	ENSPTRG00000003096	-	84	45.560	Pan_troglodytes
ENSCSAVG00000004569	-	88	47.351	ENSPANG00000020074	-	87	47.351	Papio_anubis
ENSCSAVG00000004569	-	93	43.987	ENSPKIG00000017218	mtg1	97	43.987	Paramormyrops_kingsleyae
ENSCSAVG00000004569	-	92	42.903	ENSPMGG00000020359	mtg1	96	42.903	Periophthalmus_magnuspinnatus
ENSCSAVG00000004569	-	88	47.297	ENSPEMG00000000729	Mtg1	89	47.297	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004569	-	92	45.253	ENSPMAG00000004702	mtg1	97	45.253	Petromyzon_marinus
ENSCSAVG00000004569	-	99	43.824	ENSPCIG00000017219	-	99	43.824	Phascolarctos_cinereus
ENSCSAVG00000004569	-	68	42.174	ENSPFOG00000007100	mtg1	99	42.174	Poecilia_formosa
ENSCSAVG00000004569	-	93	44.375	ENSPLAG00000019595	mtg1	98	44.375	Poecilia_latipinna
ENSCSAVG00000004569	-	93	40.426	ENSPMEG00000005297	mtg1	98	40.426	Poecilia_mexicana
ENSCSAVG00000004569	-	92	43.533	ENSPREG00000021610	mtg1	97	43.533	Poecilia_reticulata
ENSCSAVG00000004569	-	65	51.142	ENSPPYG00000002846	-	100	51.142	Pongo_abelii
ENSCSAVG00000004569	-	91	49.186	ENSPCOG00000012212	-	90	49.186	Propithecus_coquereli
ENSCSAVG00000004569	-	88	47.297	ENSPVAG00000002683	-	88	47.297	Pteropus_vampyrus
ENSCSAVG00000004569	-	92	46.795	ENSPNYG00000010344	mtg1	97	46.795	Pundamilia_nyererei
ENSCSAVG00000004569	-	92	47.097	ENSPNAG00000000757	mtg1	96	47.097	Pygocentrus_nattereri
ENSCSAVG00000004569	-	88	48.649	ENSRNOG00000018860	Mtg1	89	48.649	Rattus_norvegicus
ENSCSAVG00000004569	-	88	48.485	ENSRBIG00000044321	-	87	48.485	Rhinopithecus_bieti
ENSCSAVG00000004569	-	88	48.148	ENSRROG00000032113	-	95	47.183	Rhinopithecus_roxellana
ENSCSAVG00000004569	-	96	45.399	ENSSBOG00000032013	-	96	45.399	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004569	-	94	43.574	ENSSFOG00015017068	mtg1	99	42.917	Scleropages_formosus
ENSCSAVG00000004569	-	92	45.833	ENSSMAG00000004779	mtg1	97	45.833	Scophthalmus_maximus
ENSCSAVG00000004569	-	92	45.192	ENSSDUG00000023072	mtg1	97	45.192	Seriola_dumerili
ENSCSAVG00000004569	-	92	44.872	ENSSLDG00000015858	mtg1	97	44.872	Seriola_lalandi_dorsalis
ENSCSAVG00000004569	-	92	44.516	ENSSPUG00000009503	-	97	44.516	Sphenodon_punctatus
ENSCSAVG00000004569	-	92	47.115	ENSSPAG00000022106	mtg1	97	47.115	Stegastes_partitus
ENSCSAVG00000004569	-	92	43.188	ENSSSCG00000029088	-	93	42.675	Sus_scrofa
ENSCSAVG00000004569	-	92	42.949	ENSTGUG00000004841	-	100	42.949	Taeniopygia_guttata
ENSCSAVG00000004569	-	92	44.695	ENSTRUG00000013826	mtg1	96	44.695	Takifugu_rubripes
ENSCSAVG00000004569	-	92	44.551	ENSTNIG00000001313	mtg1	95	44.551	Tetraodon_nigroviridis
ENSCSAVG00000004569	-	88	40.404	ENSTTRG00000015833	-	88	40.404	Tursiops_truncatus
ENSCSAVG00000004569	-	96	44.172	ENSUAMG00000016163	-	96	44.172	Ursus_americanus
ENSCSAVG00000004569	-	87	44.746	ENSVVUG00000000143	-	99	44.746	Vulpes_vulpes
ENSCSAVG00000004569	-	93	43.396	ENSXETG00000022149	mtg1	98	42.765	Xenopus_tropicalis
ENSCSAVG00000004569	-	92	39.744	ENSXCOG00000012050	mtg1	96	39.744	Xiphophorus_couchianus
ENSCSAVG00000004569	-	92	43.293	ENSXMAG00000013734	mtg1	97	43.293	Xiphophorus_maculatus